RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W MRE11P32829 692 aa6.59□□□□□ -1.35
NUP49YGL172W SOL2P37262 315 aa6.59□□□□□ -1.35
NUP49YGL172W GDT1P38301 280 aaPredicted RBP6.59□□□□□ -1.35
NUP49YGL172W GIC1P38785 314 aa6.59□□□□□ -1.35
NUP49YGL172W ELO1P39540 310 aa6.59□□□□□ -1.35
NUP49YGL172W EMP65P40085 556 aa6.59□□□□□ -1.35
NUP49YGL172W SSU1P41930 458 aa6.59□□□□□ -1.35
NUP49YGL172W YJR149WP47177 404 aa6.59□□□□□ -1.35
NUP49YGL172W YJR154WP47181 346 aa6.59□□□□□ -1.35
NUP49YGL172W GCV1P48015 400 aa6.59□□□□□ -1.35
NUP49YGL172W RNR4P49723 345 aaKnown RBP6.59□□□□□ -1.35
NUP49YGL172W MRM2P53123 320 aa6.59□□□□□ -1.35
NUP49YGL172W MPS2P53159 387 aa6.59□□□□□ -1.35
NUP49YGL172W YGR015CP53208 328 aa6.59□□□□□ -1.35
NUP49YGL172W BNI4P53858 892 aa6.59□□□□□ -1.35
NUP49YGL172W SLM2P53955 656 aa6.59□□□□□ -1.35
NUP49YGL172W YML096WQ04489 525 aa6.59□□□□□ -1.35
NUP49YGL172W AHA1Q12449 350 aaKnown RBP6.59□□□□□ -1.35
NUP49YGL172W YGR161W-CQ3E744 92 aa6.59□□□□□ -1.35
NUP49YGL172W SRN2Q99176 213 aa6.59□□□□□ -1.35
NUP49YGL172W YPT6Q99260 215 aa6.59□□□□□ -1.35
NUP49YGL172W TEL1P38110 2787 aa6.59□□□□□ -1.35
NUP49YGL172W SNF5P18480 905 aa6.59□□□□□ -1.36
NUP49YGL172W BAS1P22035 811 aa6.59□□□□□ -1.36
NUP49YGL172W NPP1P25353 742 aa6.59□□□□□ -1.36
NUP49YGL172W MGM101P32787 269 aaKnown RBP6.59□□□□□ -1.36
NUP49YGL172W UTH1P36135 365 aa6.59□□□□□ -1.36
NUP49YGL172W PIM1P36775 1133 aa6.59□□□□□ -1.36
NUP49YGL172W YER034WP40022 185 aaKnown RBP6.59□□□□□ -1.36
NUP49YGL172W YJR030CP47101 745 aa6.59□□□□□ -1.36
NUP49YGL172W COS12P53053 380 aa6.59□□□□□ -1.36
NUP49YGL172W SGF73P53165 657 aa6.59□□□□□ -1.36
NUP49YGL172W GTR2P53290 341 aa6.59□□□□□ -1.36
NUP49YGL172W YNL260CP53846 198 aa6.59□□□□□ -1.36
NUP49YGL172W YML131WQ03102 365 aa6.59□□□□□ -1.36
NUP49YGL172W GAS3Q03655 524 aa6.59□□□□□ -1.36
NUP49YGL172W RAD34Q06665 692 aa6.59□□□□□ -1.36
NUP49YGL172W YOL019WQ08157 551 aa6.59□□□□□ -1.36
NUP49YGL172W YLR049CQ12110 428 aa6.59□□□□□ -1.36
NUP49YGL172W RGT2Q12300 763 aa6.59□□□□□ -1.36
NUP49YGL172W NOT5Q12514 560 aaPredicted RBP6.59□□□□□ -1.36
NUP49YGL172W HSH49Q99181 213 aaPredicted RBP6.59□□□□□ -1.36
NUP49YGL172W HRP1Q99383 534 aaKnown RBP6.59□□□□□ -1.36
NUP49YGL172W STE3P06783 470 aa6.58□□□□□ -1.36
NUP49YGL172W MRPL37P36532 105 aa6.58□□□□□ -1.36
NUP49YGL172W TRM7P38238 310 aaKnown RBP6.58□□□□□ -1.36
NUP49YGL172W YPT35P38815 214 aaKnown RBP6.58□□□□□ -1.36
NUP49YGL172W BZZ1P38822 633 aa6.58□□□□□ -1.36
NUP49YGL172W TAT2P38967 592 aa6.58□□□□□ -1.36
NUP49YGL172W CEM1P39525 442 aa6.58□□□□□ -1.36
NUP49YGL172W YAL037WP39728 267 aa6.58□□□□□ -1.36
NUP49YGL172W ARB1P40024 610 aaKnown RBP6.58□□□□□ -1.36
NUP49YGL172W SCS2P40075 244 aaKnown RBP6.58□□□□□ -1.36
NUP49YGL172W SEC27P41811 889 aaKnown RBP6.58□□□□□ -1.36
NUP49YGL172W SUM1P46676 1062 aa6.58□□□□□ -1.36
NUP49YGL172W HXT16P47185 567 aa6.58□□□□□ -1.36
NUP49YGL172W YPT32P51996 222 aaKnown RBP6.58□□□□□ -1.36
NUP49YGL172W SUT1P53032 299 aaKnown RBP6.58□□□□□ -1.36
NUP49YGL172W MDM34P53083 459 aa6.58□□□□□ -1.36
NUP49YGL172W NOP19P53317 196 aaPredicted RBP6.58□□□□□ -1.36
NUP49YGL172W HXT15P54854 567 aa6.58□□□□□ -1.36
NUP49YGL172W CTK1Q03957 528 aaKnown RBP6.58□□□□□ -1.36
NUP49YGL172W YMR034CQ05131 434 aaPredicted RBP6.58□□□□□ -1.36
NUP49YGL172W OPT2Q06593 877 aa6.58□□□□□ -1.36
NUP49YGL172W ATG29Q12092 213 aa6.58□□□□□ -1.36
NUP49YGL172W YPR011CQ12251 326 aa6.58□□□□□ -1.36
NUP49YGL172W RRP42Q12277 265 aaPredicted RBP6.58□□□□□ -1.36
NUP49YGL172W RKM5Q12367 367 aa6.58□□□□□ -1.36
NUP49YGL172W TRP3P00937 484 aa6.57□□□□□ -1.36
NUP49YGL172W SPT3P06844 337 aa6.57□□□□□ -1.36
NUP49YGL172W COS2P0CX12 379 aa6.57□□□□□ -1.36
NUP49YGL172W COS3P0CX13 379 aa6.57□□□□□ -1.36
NUP49YGL172W ARG1P22768 420 aa6.57□□□□□ -1.36
NUP49YGL172W COX13P32799 129 aa6.57□□□□□ -1.36
NUP49YGL172W CBF5P33322 483 aaKnown RBP RIP-Chip data6.57□□□□□ -1.36not detected
NUP49YGL172W NTR2P36118 322 aaPredicted RBP6.57□□□□□ -1.36
NUP49YGL172W CTP1P38152 299 aa6.57□□□□□ -1.36
NUP49YGL172W MRX1P40050 688 aa6.57□□□□□ -1.36
NUP49YGL172W FKH2P41813 862 aa6.57□□□□□ -1.36
NUP49YGL172W COS4P43542 379 aa6.57□□□□□ -1.36
NUP49YGL172W YFR020WP43600 232 aa6.57□□□□□ -1.36
NUP49YGL172W EGD1Q02642 157 aaKnown RBP6.57□□□□□ -1.36
NUP49YGL172W YPL109CQ02981 657 aa6.57□□□□□ -1.36
NUP49YGL172W GPB1Q08886 897 aa6.57□□□□□ -1.36
NUP49YGL172W SUL2Q12325 893 aa6.57□□□□□ -1.36
NUP49YGL172W MDM35O60200 86 aa6.56□□□□□ -1.36
NUP49YGL172W RPL1AP0CX43 217 aaKnown RBP6.56□□□□□ -1.36
NUP49YGL172W RPL1BP0CX44 217 aaKnown RBP6.56□□□□□ -1.36
NUP49YGL172W BUB2P26448 306 aaPredicted RBP6.56□□□□□ -1.36
NUP49YGL172W MEI5P32489 222 aa6.56□□□□□ -1.36
NUP49YGL172W PET309P32522 965 aaPredicted RBP6.56□□□□□ -1.36
NUP49YGL172W SPT16P32558 1035 aaKnown RBP6.56□□□□□ -1.36
NUP49YGL172W DOM34P33309 386 aa6.56□□□□□ -1.36
NUP49YGL172W RPS1AP33442 255 aaKnown RBP6.56□□□□□ -1.36
NUP49YGL172W ARA1P38115 344 aa6.56□□□□□ -1.36
NUP49YGL172W ERV46P39727 415 aa6.56□□□□□ -1.36
NUP49YGL172W NDE1P40215 560 aa6.56□□□□□ -1.36
NUP49YGL172W GCD10P41814 478 aa6.56□□□□□ -1.36
NUP49YGL172W YGL176CP46945 554 aa6.56□□□□□ -1.36
NUP49YGL172W ERG26P53199 349 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 34.6 ms