RNA–Protein interactions for RNA: YGL028C

SCW11, Transcript of Cell wall protein with similarity to glucanases, yeastyeast

Gene SCW11, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCW11YGL028C SPE4Q12455 300 aa1.53□□□□□ -2.16
SCW11YGL028C AMD1P15274 810 aaKnown RBP1.52□□□□□ -2.17
SCW11YGL028C KGD1P20967 1014 aaKnown RBP1.52□□□□□ -2.17
SCW11YGL028C OLE1P21147 510 aaKnown RBP1.52□□□□□ -2.17
SCW11YGL028C PRE8P23639 250 aa1.52□□□□□ -2.17
SCW11YGL028C YIM1P28625 365 aa1.52□□□□□ -2.17
SCW11YGL028C YBL059WP34224 193 aa1.52□□□□□ -2.17
SCW11YGL028C AUR1P36107 401 aaPredicted RBP1.52□□□□□ -2.17
SCW11YGL028C KTR3P38130 404 aaPredicted RBP1.52□□□□□ -2.17
SCW11YGL028C MAL33P38157 468 aa1.52□□□□□ -2.17
SCW11YGL028C FLC2P39719 783 aa1.52□□□□□ -2.17
SCW11YGL028C RPS7BP48164 190 aaKnown RBP1.52□□□□□ -2.17
SCW11YGL028C APT1P49435 187 aaKnown RBP1.52□□□□□ -2.17
SCW11YGL028C DUG3P53871 357 aa1.52□□□□□ -2.17
SCW11YGL028C EFM6P53970 246 aa1.52□□□□□ -2.17
SCW11YGL028C SDH5Q08230 162 aa1.52□□□□□ -2.17
SCW11YGL028C NOP58Q12499 511 aaKnown RBP1.52□□□□□ -2.17
SCW11YGL028C ARD1P07347 238 aaPredicted RBP1.51□□□□□ -2.17
SCW11YGL028C CPR1P14832 162 aaKnown RBP1.51□□□□□ -2.17
SCW11YGL028C HSC82P15108 705 aaKnown RBP1.51□□□□□ -2.17
SCW11YGL028C MET8P15807 274 aa1.51□□□□□ -2.17
SCW11YGL028C SGV1P23293 657 aaKnown RBP1.51□□□□□ -2.17
SCW11YGL028C VMA16P23968 213 aa1.51□□□□□ -2.17
SCW11YGL028C ADH7P25377 361 aa1.51□□□□□ -2.17
SCW11YGL028C PUP3P25451 205 aaKnown RBP1.51□□□□□ -2.17
SCW11YGL028C PUT3P25502 979 aaPredicted RBP1.51□□□□□ -2.17
SCW11YGL028C SGF29P25554 259 aa1.51□□□□□ -2.17
SCW11YGL028C PRS1P32895 427 aaKnown RBP1.51□□□□□ -2.17
SCW11YGL028C NUP133P36161 1157 aa1.51□□□□□ -2.17
SCW11YGL028C NOP4P37838 685 aaKnown RBP1.51□□□□□ -2.17
SCW11YGL028C TMA108P40462 946 aa1.51□□□□□ -2.17
SCW11YGL028C YGR210CP42942 411 aa1.51□□□□□ -2.17
SCW11YGL028C DIA3P52290 468 aa1.51□□□□□ -2.17
SCW11YGL028C ARE2P53629 642 aaKnown RBP1.51□□□□□ -2.17
SCW11YGL028C SUB1P54000 292 aaKnown RBP1.51□□□□□ -2.17
SCW11YGL028C YLR152CP54072 576 aa1.51□□□□□ -2.17
SCW11YGL028C MSC1Q03104 513 aa1.51□□□□□ -2.17
SCW11YGL028C TEN1Q07921 160 aa1.51□□□□□ -2.17
SCW11YGL028C TCO89Q08921 799 aa1.51□□□□□ -2.17
SCW11YGL028C LEU9Q12166 604 aaKnown RBP1.51□□□□□ -2.17
SCW11YGL028C CTF3Q12748 733 aa1.51□□□□□ -2.17
SCW11YGL028C YBR126W-AQ8TGU7 68 aa1.51□□□□□ -2.17
SCW11YGL028C GFD2P25370 566 aaKnown RBP1.51□□□□□ -2.17
SCW11YGL028C POL4P25615 582 aa1.51□□□□□ -2.17
SCW11YGL028C SSE2P32590 693 aaKnown RBP1.51□□□□□ -2.17
SCW11YGL028C YBL055CP34220 418 aaPredicted RBP1.51□□□□□ -2.17
SCW11YGL028C MTR2P34232 184 aaKnown RBP1.51□□□□□ -2.17
SCW11YGL028C SWD3P38123 315 aa1.51□□□□□ -2.17
SCW11YGL028C YBL029WP38201 376 aa1.51□□□□□ -2.17
SCW11YGL028C MRX6P48564 524 aa1.51□□□□□ -2.17
SCW11YGL028C SHR3Q02774 210 aa1.51□□□□□ -2.17
SCW11YGL028C PBA1Q05778 276 aa1.51□□□□□ -2.17
SCW11YGL028C MRPL51Q06090 140 aaPredicted RBP1.51□□□□□ -2.17
SCW11YGL028C LUC7Q07508 261 aaPredicted RBP1.51□□□□□ -2.17
SCW11YGL028C YEH1Q07804 573 aa1.51□□□□□ -2.17
SCW11YGL028C RRG7Q08774 242 aaPredicted RBP1.51□□□□□ -2.17
SCW11YGL028C CTI6Q08923 506 aa1.51□□□□□ -2.17
SCW11YGL028C MED1Q12321 566 aa1.51□□□□□ -2.17
SCW11YGL028C ENT1Q12518 454 aa1.51□□□□□ -2.17
SCW11YGL028C YPT6Q99260 215 aa1.51□□□□□ -2.17
SCW11YGL028C HHF1P02309 103 aaKnown RBP1.5□□□□□ -2.17
SCW11YGL028C LPD1P09624 499 aaKnown RBP1.5□□□□□ -2.17
SCW11YGL028C PEP5P12868 1029 aa1.5□□□□□ -2.17
SCW11YGL028C CLN3P13365 580 aa1.5□□□□□ -2.17
SCW11YGL028C BUD5P25300 642 aaPredicted RBP1.5□□□□□ -2.17
SCW11YGL028C YIH1P25637 258 aa1.5□□□□□ -2.17
SCW11YGL028C SPR1P32603 445 aa1.5□□□□□ -2.17
SCW11YGL028C FRE1P32791 686 aa1.5□□□□□ -2.17
SCW11YGL028C MRP4P32902 394 aa1.5□□□□□ -2.17
SCW11YGL028C YKL100CP34248 587 aa1.5□□□□□ -2.17
SCW11YGL028C YBR225WP38321 900 aa1.5□□□□□ -2.17
SCW11YGL028C NAB3P38996 802 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
SCW11YGL028C HAT2P39984 401 aa1.5□□□□□ -2.17
SCW11YGL028C SCD6P45978 349 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
SCW11YGL028C FAR3P46671 204 aa1.5□□□□□ -2.17
SCW11YGL028C LCL3P53153 274 aa1.5□□□□□ -2.17
SCW11YGL028C VPS75P53853 264 aa1.5□□□□□ -2.17
SCW11YGL028C ARK1P53974 638 aa1.5□□□□□ -2.17
SCW11YGL028C TIM10P87108 93 aa1.5□□□□□ -2.17
SCW11YGL028C ELP3Q02908 557 aaKnown RBP1.5□□□□□ -2.17
SCW11YGL028C YML037CQ03703 340 aa1.5□□□□□ -2.17
SCW11YGL028C RPC11Q04307 110 aaPredicted RBP1.5□□□□□ -2.17
SCW11YGL028C DPB4Q04603 196 aaKnown RBP1.5□□□□□ -2.17
SCW11YGL028C RCN2Q12044 265 aa1.5□□□□□ -2.17
SCW11YGL028C TMS1Q12116 473 aa1.5□□□□□ -2.17
SCW11YGL028C HUA2Q12134 243 aa1.5□□□□□ -2.17
SCW11YGL028C NCE102Q12207 173 aaRIP-Chip data1.5□□□□□ -2.17not detected
SCW11YGL028C HRT3Q12347 344 aa1.5□□□□□ -2.17
SCW11YGL028C MF(ALPHA)1P01149 165 aa1.49□□□□□ -2.17
SCW11YGL028C SEC53P07283 254 aaKnown RBP1.49□□□□□ -2.17
SCW11YGL028C ISY1P21374 235 aaPredicted RBP1.49□□□□□ -2.17
SCW11YGL028C YBR144CP34215 104 aa1.49□□□□□ -2.17
SCW11YGL028C YIL067CP40514 678 aa1.49□□□□□ -2.17
SCW11YGL028C SNG1P46950 547 aa1.49□□□□□ -2.17
SCW11YGL028C ALT2P52892 507 aa1.49□□□□□ -2.17
SCW11YGL028C DSD1P53095 428 aa1.49□□□□□ -2.17
SCW11YGL028C DRN1P53255 507 aaKnown RBP1.49□□□□□ -2.17
SCW11YGL028C YGR127WP53275 312 aa1.49□□□□□ -2.17
SCW11YGL028C BUD32P53323 261 aa1.49□□□□□ -2.17
SCW11YGL028C BUD22Q04347 519 aaKnown RBP1.49□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms