RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP6	YFR010W	BUD8	P41698	603 aa		4.07	□□□□□ -1.76
UBP6	YFR010W	MPS3	P47069	682 aa		4.07	□□□□□ -1.76
UBP6	YFR010W	FMS1	P50264	508 aa		4.07	□□□□□ -1.76
UBP6	YFR010W	YGR126W	P53274	230 aa		4.07	□□□□□ -1.76
UBP6	YFR010W	SLT2	Q00772	484 aa		4.07	□□□□□ -1.76
UBP6	YFR010W	UTP6	Q02354	440 aa	Known RBP	4.07	□□□□□ -1.76
UBP6	YFR010W	ATG21	Q02887	496 aa		4.07	□□□□□ -1.76
UBP6	YFR010W	ARG7	Q04728	441 aa		4.07	□□□□□ -1.76
UBP6	YFR010W	YPS7	Q06325	596 aa		4.07	□□□□□ -1.76
UBP6	YFR010W	LEA1	Q08963	238 aa	Predicted RBP	4.07	□□□□□ -1.76
UBP6	YFR010W	NUS1	Q12063	375 aa		4.07	□□□□□ -1.76
UBP6	YFR010W	PUS9	Q12069	462 aa		4.07	□□□□□ -1.76
UBP6	YFR010W	SFG1	Q12507	346 aa		4.07	□□□□□ -1.76
UBP6	YFR010W	ARG4	P04076	463 aa	Predicted RBP	4.06	□□□□□ -1.76
UBP6	YFR010W	MET3	P08536	511 aa		4.06	□□□□□ -1.76
UBP6	YFR010W	SAM1	P10659	382 aa	Known RBP	4.06	□□□□□ -1.76
UBP6	YFR010W	SPE2	P21182	396 aa		4.06	□□□□□ -1.76
UBP6	YFR010W	TPS2	P31688	896 aa	Known RBP	4.06	□□□□□ -1.76
UBP6	YFR010W	ATP11	P32453	318 aa		4.06	□□□□□ -1.76
UBP6	YFR010W	YME2	P32843	850 aa		4.06	□□□□□ -1.76
UBP6	YFR010W	CYM1	P32898	989 aa		4.06	□□□□□ -1.76
UBP6	YFR010W	UBC6	P33296	250 aa	Predicted RBP	4.06	□□□□□ -1.76
UBP6	YFR010W	CMC1	P36064	111 aa		4.06	□□□□□ -1.76
UBP6	YFR010W	AUR1	P36107	401 aa	Predicted RBP	4.06	□□□□□ -1.76
UBP6	YFR010W	YBR139W	P38109	508 aa		4.06	□□□□□ -1.76
UBP6	YFR010W	MAL32	P38158	584 aa		4.06	□□□□□ -1.76
UBP6	YFR010W	PFF1	P38244	976 aa		4.06	□□□□□ -1.76
UBP6	YFR010W	POP7	P38291	140 aa		4.06	□□□□□ -1.76
UBP6	YFR010W	GLG2	P47011	380 aa		4.06	□□□□□ -1.76
UBP6	YFR010W	MNN10	P50108	393 aa	Known RBP	4.06	□□□□□ -1.76
UBP6	YFR010W	PEF1	P53238	335 aa		4.06	□□□□□ -1.76
UBP6	YFR010W	MAL12	P53341	584 aa		4.06	□□□□□ -1.76
UBP6	YFR010W	RPT4	P53549	437 aa	Known RBP	4.06	□□□□□ -1.76
UBP6	YFR010W	YKR011C	Q02209	353 aa		4.06	□□□□□ -1.76
UBP6	YFR010W	YDR239C	Q03780	787 aa		4.06	□□□□□ -1.76
UBP6	YFR010W	BNA7	Q04066	261 aa		4.06	□□□□□ -1.76
UBP6	YFR010W	SMA2	Q04658	369 aa		4.06	□□□□□ -1.76
UBP6	YFR010W	STE23	Q06010	1027 aa		4.06	□□□□□ -1.76
UBP6	YFR010W	VTA1	Q06263	330 aa		4.06	□□□□□ -1.76
UBP6	YFR010W	GPN3	Q06543	272 aa		4.06	□□□□□ -1.76
UBP6	YFR010W	ATG23	Q06671	453 aa		4.06	□□□□□ -1.76
UBP6	YFR010W	STP4	Q07351	490 aa		4.06	□□□□□ -1.76
UBP6	YFR010W	ICL2	Q12031	575 aa		4.06	□□□□□ -1.76
UBP6	YFR010W	SRO7	Q12038	1033 aa		4.06	□□□□□ -1.76
UBP6	YFR010W	SUL2	Q12325	893 aa		4.06	□□□□□ -1.76
UBP6	YFR010W	NDJ1	Q12366	352 aa		4.06	□□□□□ -1.76
UBP6	YFR010W	HIS5	P07172	385 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	YAK1	P14680	807 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	SEC63	P14906	663 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	UTR1	P21373	530 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	ARG1	P22768	420 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	DPB2	P24482	689 aa	Predicted RBP	4.05	□□□□□ -1.76
UBP6	YFR010W	BEM1	P29366	551 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	SIP1	P32578	815 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	RML2	P32611	393 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	SEC66	P33754	206 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	KTR3	P38130	404 aa	Predicted RBP	4.05	□□□□□ -1.76
UBP6	YFR010W	PLB1	P39105	664 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	RCY1	P39531	840 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	NUP60	P39705	539 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	HXT14	P42833	540 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	PET130	P47065	347 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	BRO1	P48582	844 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	TWF1	P53250	332 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	LEE1	Q02799	301 aa	Known RBP	4.05	□□□□□ -1.76
UBP6	YFR010W	YML037C	Q03703	340 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	GFD1	Q04839	188 aa	Known RBP	4.05	□□□□□ -1.76
UBP6	YFR010W	RBS1	Q05672	457 aa	Known RBP	4.05	□□□□□ -1.76
UBP6	YFR010W	ADY4	Q05955	493 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	SEC10	Q06245	871 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	GPR1	Q12361	961 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	ATP2	P00830	511 aa	Known RBP	4.05	□□□□□ -1.76
UBP6	YFR010W	PET122	P10355	254 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	TCP1	P12612	559 aa	Known RBP	4.05	□□□□□ -1.76
UBP6	YFR010W	RPL3	P14126	387 aa	Known RBP	4.05	□□□□□ -1.76
UBP6	YFR010W	MRPL8	P22353	238 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	MEK1	P24719	497 aa	Predicted RBP	4.05	□□□□□ -1.76
UBP6	YFR010W	HCM1	P25364	564 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	HXT3	P32466	567 aa	Known RBP	4.05	□□□□□ -1.76
UBP6	YFR010W	PCL6	P40038	420 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	ELO3	P40319	345 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	SNZ3	P43545	298 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	YJL132W	P47014	750 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	ZAP1	P47043	880 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	RAI1	P53063	387 aa	Known RBP	4.05	□□□□□ -1.76
UBP6	YFR010W	DRN1	P53255	507 aa	Known RBP	4.05	□□□□□ -1.76
UBP6	YFR010W	CAF130	P53280	1122 aa	Predicted RBP	4.05	□□□□□ -1.76
UBP6	YFR010W	COP1	P53622	1201 aa	Known RBP	4.05	□□□□□ -1.76
UBP6	YFR010W	SNZ2	P53824	298 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	YDR179W-A	Q03983	463 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	BUD22	Q04347	519 aa	Known RBP	4.05	□□□□□ -1.76
UBP6	YFR010W	ARP10	Q04549	284 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	ATG17	Q06410	417 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	TMA16	Q08687	178 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	RDR1	Q08904	546 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	THI21	Q08975	551 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	YPL272C	Q08984	517 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	AEP3	Q12089	606 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	YOR022C	Q12204	715 aa		4.05	□□□□□ -1.76
UBP6	YFR010W	SKI3	P17883	1432 aa	Known RBP	4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms