RNA–Protein interactions for RNA: YER139C

RTR1, Transcript of CTD phosphatase, yeastyeast

Gene RTR1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTR1YER139C NAT2P37293 288 aa2.03□□□□□ -2.08
RTR1YER139C YNG2P38806 282 aaKnown RBP2.03□□□□□ -2.08
RTR1YER139C FAU1P40099 211 aa2.03□□□□□ -2.08
RTR1YER139C PAN6P40459 309 aa2.03□□□□□ -2.08
RTR1YER139C UBX4P54730 416 aa2.03□□□□□ -2.08
RTR1YER139C MSC1Q03104 513 aa2.03□□□□□ -2.08
RTR1YER139C MUB1Q03162 620 aa2.03□□□□□ -2.08
RTR1YER139C DPB4Q04603 196 aaKnown RBP2.03□□□□□ -2.08
RTR1YER139C NCE102Q12207 173 aaRIP-Chip data2.03□□□□□ -2.08not detected
RTR1YER139C MTF2P10849 440 aa2.02□□□□□ -2.09
RTR1YER139C UBC1P21734 215 aaKnown RBP2.02□□□□□ -2.09
RTR1YER139C MSM1P22438 575 aa2.02□□□□□ -2.09
RTR1YER139C SYN8P31377 255 aa2.02□□□□□ -2.09
RTR1YER139C DBF20P32328 564 aa2.02□□□□□ -2.09
RTR1YER139C UTR4P32626 227 aa2.02□□□□□ -2.09
RTR1YER139C TPM2P40414 161 aa2.02□□□□□ -2.09
RTR1YER139C GCD10P41814 478 aa2.02□□□□□ -2.09
RTR1YER139C BLS1Q06071 122 aa2.02□□□□□ -2.09
RTR1YER139C PHO92Q06390 306 aa2.02□□□□□ -2.09
RTR1YER139C PSR1Q07800 427 aa2.02□□□□□ -2.09
RTR1YER139C SUC2P00724 532 aa2.01□□□□□ -2.09
RTR1YER139C RAD52P06778 471 aaKnown RBP2.01□□□□□ -2.09
RTR1YER139C PTH2P34222 208 aa2.01□□□□□ -2.09
RTR1YER139C BMT2P38278 337 aa2.01□□□□□ -2.09
RTR1YER139C SLZ1P40167 298 aa2.01□□□□□ -2.09
RTR1YER139C WWM1P43582 211 aaKnown RBP2.01□□□□□ -2.09
RTR1YER139C AVT4P50944 713 aa2.01□□□□□ -2.09
RTR1YER139C PIL1P53252 339 aaKnown RBP2.01□□□□□ -2.09
RTR1YER139C BSC5P53755 489 aa2.01□□□□□ -2.09
RTR1YER139C MRPL13Q02204 264 aa2.01□□□□□ -2.09
RTR1YER139C RSN1Q03516 953 aa2.01□□□□□ -2.09
RTR1YER139C YOR365CQ08844 703 aa2.01□□□□□ -2.09
RTR1YER139C YLR108CQ12259 485 aa2.01□□□□□ -2.09
RTR1YER139C YLR302CO13544 120 aa2□□□□□ -2.09
RTR1YER139C PFK2P16862 959 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
RTR1YER139C DAL2P25335 343 aa2□□□□□ -2.09
RTR1YER139C ADH7P25377 361 aa2□□□□□ -2.09
RTR1YER139C YBL055CP34220 418 aaPredicted RBP2□□□□□ -2.09
RTR1YER139C NUP133P36161 1157 aa2□□□□□ -2.09
RTR1YER139C RRT5P43607 289 aa2□□□□□ -2.09
RTR1YER139C RTS3P53289 263 aa2□□□□□ -2.09
RTR1YER139C YDL057WQ07379 328 aa2□□□□□ -2.09
RTR1YER139C MRS6P32864 603 aaKnown RBP1.99□□□□□ -2.09
RTR1YER139C ALY1P36117 915 aa1.99□□□□□ -2.09
RTR1YER139C YHR210CP38893 341 aa1.99□□□□□ -2.09
RTR1YER139C UME6P39001 836 aa1.99□□□□□ -2.09
RTR1YER139C PTR3P43606 678 aa1.99□□□□□ -2.09
RTR1YER139C RRT6P53117 311 aaPredicted RBP1.99□□□□□ -2.09
RTR1YER139C YGR126WP53274 230 aa1.99□□□□□ -2.09
RTR1YER139C GOR1P53839 350 aa1.99□□□□□ -2.09
RTR1YER139C ATG16Q03818 150 aa1.99□□□□□ -2.09
RTR1YER139C SSM4P40318 1319 aa1.98□□□□□ -2.09
RTR1YER139C RPB2P08518 1224 aaKnown RBP1.98□□□□□ -2.09
RTR1YER139C VMA16P23968 213 aa1.98□□□□□ -2.09
RTR1YER139C XRS2P33301 854 aa1.98□□□□□ -2.09
RTR1YER139C RPL32P38061 130 aaKnown RBP1.98□□□□□ -2.09
RTR1YER139C TIF4631P39935 952 aaKnown RBP1.98□□□□□ -2.09
RTR1YER139C SAP185P40856 1058 aa1.98□□□□□ -2.09
RTR1YER139C ART5P53244 586 aaKnown RBP1.98□□□□□ -2.09
RTR1YER139C GPI1P53306 609 aa1.98□□□□□ -2.09
RTR1YER139C IBD2P53892 351 aa1.98□□□□□ -2.09
RTR1YER139C RPC11Q04307 110 aaPredicted RBP1.98□□□□□ -2.09
RTR1YER139C VMS1Q04311 632 aaKnown RBP1.98□□□□□ -2.09
RTR1YER139C SUI2P20459 304 aaKnown RBP1.97□□□□□ -2.09
RTR1YER139C KGD1P20967 1014 aaKnown RBP1.97□□□□□ -2.09
RTR1YER139C CNS1P33313 385 aa1.97□□□□□ -2.09
RTR1YER139C TEF4P36008 412 aaKnown RBP1.97□□□□□ -2.09
RTR1YER139C RIC1P40395 1056 aa1.97□□□□□ -2.09
RTR1YER139C PEX25Q02969 394 aa1.97□□□□□ -2.09
RTR1YER139C IES4Q08561 116 aa1.97□□□□□ -2.09
RTR1YER139C YPS3Q12303 508 aa1.97□□□□□ -2.09
RTR1YER139C BOS1P25385 244 aa1.96□□□□□ -2.1
RTR1YER139C PUP3P25451 205 aaKnown RBP1.96□□□□□ -2.1
RTR1YER139C NDI1P32340 513 aa1.96□□□□□ -2.1
RTR1YER139C SLC1P33333 303 aa1.96□□□□□ -2.1
RTR1YER139C PSY4P38193 441 aa1.96□□□□□ -2.1
RTR1YER139C IES5P40060 125 aa1.96□□□□□ -2.1
RTR1YER139C PRM5P40476 318 aa1.96□□□□□ -2.1
RTR1YER139C YGR021WP53212 290 aa1.96□□□□□ -2.1
RTR1YER139C FDH1Q08911 376 aa1.96□□□□□ -2.1
RTR1YER139C TRM8Q12009 286 aa1.96□□□□□ -2.1
RTR1YER139C CFT2Q12102 859 aaPredicted RBP1.96□□□□□ -2.1
RTR1YER139C SNF1P06782 633 aaKnown RBP1.95□□□□□ -2.1
RTR1YER139C PWP2P25635 923 aaKnown RBP1.95□□□□□ -2.1
RTR1YER139C MRP20P32387 263 aa1.95□□□□□ -2.1
RTR1YER139C VPS24P36095 224 aaKnown RBP1.95□□□□□ -2.1
RTR1YER139C FUI1P38196 639 aa1.95□□□□□ -2.1
RTR1YER139C VID24P38263 362 aa1.95□□□□□ -2.1
RTR1YER139C ICS2P38284 255 aa1.95□□□□□ -2.1
RTR1YER139C MSG5P38590 489 aa1.95□□□□□ -2.1
RTR1YER139C EFM6P53970 246 aa1.95□□□□□ -2.1
RTR1YER139C GTR1Q00582 310 aa1.95□□□□□ -2.1
RTR1YER139C RCO1Q04779 684 aa1.95□□□□□ -2.1
RTR1YER139C TRX2P22803 104 aaKnown RBP1.94□□□□□ -2.1
RTR1YER139C IMG1P25626 169 aa1.94□□□□□ -2.1
RTR1YER139C GLC7P32598 312 aaKnown RBP1.94□□□□□ -2.1
RTR1YER139C SEF1P34228 1148 aa1.94□□□□□ -2.1
RTR1YER139C FRE2P36033 711 aa1.94□□□□□ -2.1
RTR1YER139C BNA1P47096 177 aa1.94□□□□□ -2.1
RTR1YER139C YGR127WP53275 312 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms