RNA–Protein interactions for RNA: YER050C

RSM18, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM18, Length 417 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM18	YER050C	THP1	Q08231	455 aa		3.18	□□□□□ -1.9
RSM18	YER050C	RCN2	Q12044	265 aa		3.18	□□□□□ -1.9
RSM18	YER050C	NMD4	Q12129	218 aa		3.18	□□□□□ -1.9
RSM18	YER050C	AYT1	Q12226	474 aa		3.18	□□□□□ -1.9
RSM18	YER050C	BRR1	Q99177	341 aa	Predicted RBP	3.18	□□□□□ -1.9
RSM18	YER050C	AMD1	P15274	810 aa	Known RBP	3.17	□□□□□ -1.9
RSM18	YER050C	NOP1	P15646	327 aa	Known RBP	3.17	□□□□□ -1.9
RSM18	YER050C	PAH1	P32567	862 aa		3.17	□□□□□ -1.9
RSM18	YER050C	SHO1	P40073	367 aa		3.17	□□□□□ -1.9
RSM18	YER050C	ALG8	P40351	577 aa		3.17	□□□□□ -1.9
RSM18	YER050C	SLD5	Q03406	294 aa		3.17	□□□□□ -1.9
RSM18	YER050C	YKU80	Q04437	629 aa		3.17	□□□□□ -1.9
RSM18	YER050C	BNA5	Q05979	453 aa		3.17	□□□□□ -1.9
RSM18	YER050C	YOR365C	Q08844	703 aa		3.17	□□□□□ -1.9
RSM18	YER050C	NCE102	Q12207	173 aa	RIP-Chip data	3.17	□□□□□ -1.9	not detected
RSM18	YER050C	SEM1	O94742	89 aa		3.16	□□□□□ -1.9
RSM18	YER050C	RAD52	P06778	471 aa	Known RBP	3.16	□□□□□ -1.9
RSM18	YER050C	ATS1	P31386	333 aa		3.16	□□□□□ -1.9
RSM18	YER050C	UTR4	P32626	227 aa		3.16	□□□□□ -1.9
RSM18	YER050C	FRE1	P32791	686 aa		3.16	□□□□□ -1.9
RSM18	YER050C	PMU1	P36069	295 aa		3.16	□□□□□ -1.9
RSM18	YER050C	BNA4	P38169	460 aa		3.16	□□□□□ -1.9
RSM18	YER050C	REG2	P38232	338 aa		3.16	□□□□□ -1.9
RSM18	YER050C	SDS24	P38314	527 aa		3.16	□□□□□ -1.9
RSM18	YER050C	TMA108	P40462	946 aa		3.16	□□□□□ -1.9
RSM18	YER050C	IDP2	P41939	412 aa		3.16	□□□□□ -1.9
RSM18	YER050C	YGL242C	P53066	181 aa		3.16	□□□□□ -1.9
RSM18	YER050C	YGR066C	P53242	292 aa		3.16	□□□□□ -1.9
RSM18	YER050C	GPI1	P53306	609 aa		3.16	□□□□□ -1.9
RSM18	YER050C	NGL3	Q03210	505 aa		3.16	□□□□□ -1.9
RSM18	YER050C	YLL056C	Q12177	298 aa		3.16	□□□□□ -1.9
RSM18	YER050C	YPT6	Q99260	215 aa		3.16	□□□□□ -1.9
RSM18	YER050C	PEP4	P07267	405 aa	Known RBP	3.15	□□□□□ -1.91
RSM18	YER050C	MRP13	P12686	339 aa		3.15	□□□□□ -1.91
RSM18	YER050C	SGV1	P23293	657 aa	Known RBP	3.15	□□□□□ -1.91
RSM18	YER050C	PEP3	P27801	918 aa		3.15	□□□□□ -1.91
RSM18	YER050C	YME1	P32795	747 aa		3.15	□□□□□ -1.91
RSM18	YER050C	YOX1	P34161	385 aa		3.15	□□□□□ -1.91
RSM18	YER050C	AVT5	P38176	459 aa		3.15	□□□□□ -1.91
RSM18	YER050C	MSR1	P38714	643 aa		3.15	□□□□□ -1.91
RSM18	YER050C	NOP16	P40007	231 aa	Known RBP	3.15	□□□□□ -1.91
RSM18	YER050C	BOR1	P53838	576 aa		3.15	□□□□□ -1.91
RSM18	YER050C	FIN1	Q03898	291 aa		3.15	□□□□□ -1.91
RSM18	YER050C	PHO92	Q06390	306 aa		3.15	□□□□□ -1.91
RSM18	YER050C	TLG2	Q08144	397 aa		3.15	□□□□□ -1.91
RSM18	YER050C	HSC82	P15108	705 aa	Known RBP	3.14	□□□□□ -1.91
RSM18	YER050C	TIF3	P34167	436 aa	Known RBP	3.14	□□□□□ -1.91
RSM18	YER050C	CCT6	P39079	546 aa		3.14	□□□□□ -1.91
RSM18	YER050C	VID27	P40157	782 aa		3.14	□□□□□ -1.91
RSM18	YER050C	YPI1	P43587	155 aa		3.14	□□□□□ -1.91
RSM18	YER050C	IMD4	P50094	524 aa	Known RBP	3.14	□□□□□ -1.91
RSM18	YER050C	SVL3	Q03088	825 aa	Known RBP	3.14	□□□□□ -1.91
RSM18	YER050C	CTI6	Q08923	506 aa		3.14	□□□□□ -1.91
RSM18	YER050C	AVL9	Q12500	764 aa		3.14	□□□□□ -1.91
RSM18	YER050C	YJR112W-A	Q3E743	109 aa		3.14	□□□□□ -1.91
RSM18	YER050C	SUC2	P00724	532 aa		3.13	□□□□□ -1.91
RSM18	YER050C	HEM2	P05373	342 aa		3.13	□□□□□ -1.91
RSM18	YER050C	LPD1	P09624	499 aa	Known RBP	3.13	□□□□□ -1.91
RSM18	YER050C	RSM22	P36056	628 aa		3.13	□□□□□ -1.91
RSM18	YER050C	TCD2	P36101	447 aa	Known RBP	3.13	□□□□□ -1.91
RSM18	YER050C	DUG2	P38149	878 aa		3.13	□□□□□ -1.91
RSM18	YER050C	TCM62	P38228	572 aa	Known RBP	3.13	□□□□□ -1.91
RSM18	YER050C	TIF4631	P39935	952 aa	Known RBP	3.13	□□□□□ -1.91
RSM18	YER050C	RMD8	P43620	662 aa		3.13	□□□□□ -1.91
RSM18	YER050C	COQ9	Q05779	260 aa		3.13	□□□□□ -1.91
RSM18	YER050C	VPS38	Q05919	439 aa		3.13	□□□□□ -1.91
RSM18	YER050C	CBS1	P14066	229 aa		3.12	□□□□□ -1.91
RSM18	YER050C	SAN1	P22470	610 aa		3.12	□□□□□ -1.91
RSM18	YER050C	GFD2	P25370	566 aa	Known RBP	3.12	□□□□□ -1.91
RSM18	YER050C	PUT3	P25502	979 aa	Predicted RBP	3.12	□□□□□ -1.91
RSM18	YER050C	PCA1	P38360	1216 aa		3.12	□□□□□ -1.91
RSM18	YER050C	MKT1	P40850	830 aa	Known RBP	3.12	□□□□□ -1.91
RSM18	YER050C	ZPR1	P53303	486 aa	Known RBP	3.12	□□□□□ -1.91
RSM18	YER050C	HEF3	P53978	1044 aa	Known RBP	3.12	□□□□□ -1.91
RSM18	YER050C	SMA2	Q04658	369 aa		3.12	□□□□□ -1.91
RSM18	YER050C	RBS1	Q05672	457 aa	Known RBP	3.12	□□□□□ -1.91
RSM18	YER050C	YDR056C	Q12025	205 aa		3.12	□□□□□ -1.91
RSM18	YER050C	RLM1	Q12224	676 aa		3.12	□□□□□ -1.91
RSM18	YER050C	RAV1	P47104	1357 aa		3.12	□□□□□ -1.91
RSM18	YER050C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
RSM18	YER050C	REV1	P12689	985 aa		3.11	□□□□□ -1.91
RSM18	YER050C	CPR1	P14832	162 aa	Known RBP	3.11	□□□□□ -1.91
RSM18	YER050C	AAC3	P18238	307 aa		3.11	□□□□□ -1.91
RSM18	YER050C	YCR022C	P25620	114 aa		3.11	□□□□□ -1.91
RSM18	YER050C	CBP4	P37267	147 aa		3.11	□□□□□ -1.91
RSM18	YER050C	TIF5	P38431	405 aa	Known RBP	3.11	□□□□□ -1.91
RSM18	YER050C	HAT2	P39984	401 aa		3.11	□□□□□ -1.91
RSM18	YER050C	GWT1	P47026	490 aa		3.11	□□□□□ -1.91
RSM18	YER050C	URB2	P47108	1174 aa		3.11	□□□□□ -1.91
RSM18	YER050C	DRN1	P53255	507 aa	Known RBP	3.11	□□□□□ -1.91
RSM18	YER050C	MSO1	P53604	210 aa	Known RBP	3.11	□□□□□ -1.91
RSM18	YER050C	HEL2	Q05580	639 aa	Known RBP	3.11	□□□□□ -1.91
RSM18	YER050C	HNT3	Q08702	217 aa		3.11	□□□□□ -1.91
RSM18	YER050C	GCN4	P03069	281 aa		3.1	□□□□□ -1.91
RSM18	YER050C	GAL80	P04387	435 aa		3.1	□□□□□ -1.91
RSM18	YER050C	COR1	P07256	457 aa		3.1	□□□□□ -1.91
RSM18	YER050C	PMR1	P13586	950 aa		3.1	□□□□□ -1.91
RSM18	YER050C	GLK1	P17709	500 aa	Known RBP	3.1	□□□□□ -1.91
RSM18	YER050C	PRP2	P20095	876 aa	Predicted RBP	3.1	□□□□□ -1.91
RSM18	YER050C	FUN19	P28003	413 aa	Predicted RBP	3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 10 ms