RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C GPI10P30777 616 aa3.22□□□□□ -1.89
VAB2YEL005C ERG1P32476 496 aaKnown RBP3.22□□□□□ -1.89
VAB2YEL005C CBP4P37267 147 aa3.22□□□□□ -1.89
VAB2YEL005C EFM2P38347 419 aa3.22□□□□□ -1.89
VAB2YEL005C YEL057CP39983 233 aa3.22□□□□□ -1.89
VAB2YEL005C MET28P40573 187 aa3.22□□□□□ -1.89
VAB2YEL005C RHO4Q00246 291 aa3.22□□□□□ -1.89
VAB2YEL005C MSC1Q03104 513 aa3.22□□□□□ -1.89
VAB2YEL005C DIC1Q06143 298 aa3.22□□□□□ -1.89
VAB2YEL005C SFI1Q12369 946 aa3.22□□□□□ -1.89
VAB2YEL005C PRD1P25375 712 aa3.21□□□□□ -1.9
VAB2YEL005C ACH1P32316 526 aa3.21□□□□□ -1.9
VAB2YEL005C MRE11P32829 692 aa3.21□□□□□ -1.9
VAB2YEL005C ARP1P38696 384 aa3.21□□□□□ -1.9
VAB2YEL005C YHR210CP38893 341 aa3.21□□□□□ -1.9
VAB2YEL005C YTA12P40341 825 aa3.21□□□□□ -1.9
VAB2YEL005C HXT14P42833 540 aa3.21□□□□□ -1.9
VAB2YEL005C ROK1P45818 564 aaPredicted RBP3.21□□□□□ -1.9
VAB2YEL005C YJR154WP47181 346 aa3.21□□□□□ -1.9
VAB2YEL005C SAM50P53969 484 aa3.21□□□□□ -1.9
VAB2YEL005C IVY1Q04934 453 aa3.21□□□□□ -1.9
VAB2YEL005C COQ9Q05779 260 aa3.21□□□□□ -1.9
VAB2YEL005C PDH1Q12428 516 aaKnown RBP3.21□□□□□ -1.9
VAB2YEL005C RTN2Q12443 393 aa3.21□□□□□ -1.9
VAB2YEL005C SEC39Q12745 709 aa3.21□□□□□ -1.9
VAB2YEL005C YPT1P01123 206 aaKnown RBP3.2□□□□□ -1.9
VAB2YEL005C COR1P07256 457 aa3.2□□□□□ -1.9
VAB2YEL005C BAR1P12630 587 aa3.2□□□□□ -1.9
VAB2YEL005C GLN3P18494 730 aa3.2□□□□□ -1.9
VAB2YEL005C EXO70P19658 623 aa3.2□□□□□ -1.9
VAB2YEL005C REC107P21651 314 aa3.2□□□□□ -1.9
VAB2YEL005C ROX1P25042 368 aa3.2□□□□□ -1.9
VAB2YEL005C MFT1P33441 392 aaKnown RBP3.2□□□□□ -1.9
VAB2YEL005C RIM2P38127 377 aa3.2□□□□□ -1.9
VAB2YEL005C DIM1P41819 318 aaKnown RBP3.2□□□□□ -1.9
VAB2YEL005C MNP1P53163 194 aaPredicted RBP3.2□□□□□ -1.9
VAB2YEL005C BUD32P53323 261 aa3.2□□□□□ -1.9
VAB2YEL005C TAF11Q04226 346 aa3.2□□□□□ -1.9
VAB2YEL005C MRD1Q06106 887 aaKnown RBP3.2□□□□□ -1.9
VAB2YEL005C NRT1Q08485 598 aa3.2□□□□□ -1.9
VAB2YEL005C RRG1Q12167 365 aaPredicted RBP3.2□□□□□ -1.9
VAB2YEL005C SCM3Q12334 223 aa3.2□□□□□ -1.9
VAB2YEL005C YDL007C-AQ2V2Q0 85 aa3.2□□□□□ -1.9
VAB2YEL005C RPL31BP0C2H9 113 aaKnown RBP3.19□□□□□ -1.9
VAB2YEL005C APE1P14904 514 aa3.19□□□□□ -1.9
VAB2YEL005C PPZ1P26570 692 aa3.19□□□□□ -1.9
VAB2YEL005C PMT1P33775 817 aa3.19□□□□□ -1.9
VAB2YEL005C ECM15P35195 104 aa3.19□□□□□ -1.9
VAB2YEL005C SPC34P36131 295 aa3.19□□□□□ -1.9
VAB2YEL005C MBB1P39534 108 aa3.19□□□□□ -1.9
VAB2YEL005C CSM2P40465 213 aa3.19□□□□□ -1.9
VAB2YEL005C MET18P40469 1032 aa3.19□□□□□ -1.9
VAB2YEL005C POP1P41812 875 aa3.19□□□□□ -1.9
VAB2YEL005C GPD2P41911 440 aaKnown RBP3.19□□□□□ -1.9
VAB2YEL005C ZPR1P53303 486 aaKnown RBP3.19□□□□□ -1.9
VAB2YEL005C HEF3P53978 1044 aaKnown RBP3.19□□□□□ -1.9
VAB2YEL005C TIP41Q12199 356 aa3.19□□□□□ -1.9
VAB2YEL005C RAD52P06778 471 aaKnown RBP3.18□□□□□ -1.9
VAB2YEL005C PEP4P07267 405 aaKnown RBP3.18□□□□□ -1.9
VAB2YEL005C RPL3P14126 387 aaKnown RBP3.18□□□□□ -1.9
VAB2YEL005C PRP2P20095 876 aaPredicted RBP3.18□□□□□ -1.9
VAB2YEL005C AFG1P32317 509 aa3.18□□□□□ -1.9
VAB2YEL005C REC114P32841 428 aa3.18□□□□□ -1.9
VAB2YEL005C PTR2P32901 601 aa3.18□□□□□ -1.9
VAB2YEL005C OSH3P38713 996 aaKnown RBP3.18□□□□□ -1.9
VAB2YEL005C RTT107P38850 1070 aa3.18□□□□□ -1.9
VAB2YEL005C SMF1P38925 575 aa3.18□□□□□ -1.9
VAB2YEL005C TIF4631P39935 952 aaKnown RBP3.18□□□□□ -1.9
VAB2YEL005C YAT2P40017 923 aa3.18□□□□□ -1.9
VAB2YEL005C ELP2P42935 788 aa3.18□□□□□ -1.9
VAB2YEL005C VTC2P43585 828 aa3.18□□□□□ -1.9
VAB2YEL005C IKS1P47042 667 aa3.18□□□□□ -1.9
VAB2YEL005C AIM22P47051 409 aa3.18□□□□□ -1.9
VAB2YEL005C OCA1P50946 238 aaPredicted RBP3.18□□□□□ -1.9
VAB2YEL005C GPI1P53306 609 aa3.18□□□□□ -1.9
VAB2YEL005C CRZ1P53968 678 aa3.18□□□□□ -1.9
VAB2YEL005C RQC1Q05468 723 aaKnown RBP3.18□□□□□ -1.9
VAB2YEL005C LSP1Q12230 341 aaKnown RBP3.18□□□□□ -1.9
VAB2YEL005C SRV2P17555 526 aaKnown RBP3.17□□□□□ -1.9
VAB2YEL005C RAD14P28519 371 aa3.17□□□□□ -1.9
VAB2YEL005C PRO3P32263 286 aaKnown RBP3.17□□□□□ -1.9
VAB2YEL005C UTR4P32626 227 aa3.17□□□□□ -1.9
VAB2YEL005C RSM22P36056 628 aa3.17□□□□□ -1.9
VAB2YEL005C TCM62P38228 572 aaKnown RBP3.17□□□□□ -1.9
VAB2YEL005C YND1P40009 630 aa3.17□□□□□ -1.9
VAB2YEL005C SSU1P41930 458 aa3.17□□□□□ -1.9
VAB2YEL005C URB2P47108 1174 aa3.17□□□□□ -1.9
VAB2YEL005C JJJ1P53863 590 aa3.17□□□□□ -1.9
VAB2YEL005C GIR2Q03768 265 aaPredicted RBP3.17□□□□□ -1.9
VAB2YEL005C RBA50Q04418 439 aa3.17□□□□□ -1.9
VAB2YEL005C VTA1Q06263 330 aa3.17□□□□□ -1.9
VAB2YEL005C THI20Q08224 551 aa3.17□□□□□ -1.9
VAB2YEL005C YOR365CQ08844 703 aa3.17□□□□□ -1.9
VAB2YEL005C NCE102Q12207 173 aaRIP-Chip data3.17□□□□□ -1.9not detected
VAB2YEL005C MES1P00958 751 aaKnown RBP3.16□□□□□ -1.9
VAB2YEL005C RHO2P06781 192 aa3.16□□□□□ -1.9
VAB2YEL005C SPS4P09937 338 aa3.16□□□□□ -1.9
VAB2YEL005C MTF1P14908 341 aaKnown RBP3.16□□□□□ -1.9
VAB2YEL005C CLC1P17891 233 aa3.16□□□□□ -1.9
VAB2YEL005C YCR007CP25354 239 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms