RNA–Protein interactions for RNA: YDR254W

CHL4, Transcript of Outer kinetochore protein required for chromosome stability, yeast

Gene CHL4, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL4	YDR254W	KIN2	P13186	1147 aa	Known RBP	5.81	□□□□□ -1.48
CHL4	YDR254W	KGD1	P20967	1014 aa	Known RBP	5.81	□□□□□ -1.48
CHL4	YDR254W	SEC62	P21825	274 aa		5.81	□□□□□ -1.48
CHL4	YDR254W	SNT1	P25357	1226 aa		5.81	□□□□□ -1.48
CHL4	YDR254W	TPS2	P31688	896 aa	Known RBP	5.81	□□□□□ -1.48
CHL4	YDR254W	YME2	P32843	850 aa		5.81	□□□□□ -1.48
CHL4	YDR254W	AUR1	P36107	401 aa	Predicted RBP	5.81	□□□□□ -1.48
CHL4	YDR254W	TDP1	P38319	544 aa		5.81	□□□□□ -1.48
CHL4	YDR254W	PCL6	P40038	420 aa		5.81	□□□□□ -1.48
CHL4	YDR254W	GLG2	P47011	380 aa		5.81	□□□□□ -1.48
CHL4	YDR254W	YKE2	P52553	114 aa		5.81	□□□□□ -1.48
CHL4	YDR254W	DRN1	P53255	507 aa	Known RBP	5.81	□□□□□ -1.48
CHL4	YDR254W	INN1	P53901	409 aa		5.81	□□□□□ -1.48
CHL4	YDR254W	UTP6	Q02354	440 aa	Known RBP	5.81	□□□□□ -1.48
CHL4	YDR254W	YML037C	Q03703	340 aa		5.81	□□□□□ -1.48
CHL4	YDR254W	VTA1	Q06263	330 aa		5.81	□□□□□ -1.48
CHL4	YDR254W	ATG17	Q06410	417 aa		5.81	□□□□□ -1.48
CHL4	YDR254W	NDL1	Q06568	189 aa		5.81	□□□□□ -1.48
CHL4	YDR254W	VAM6	Q07468	1049 aa		5.81	□□□□□ -1.48
CHL4	YDR254W	TCP1	P12612	559 aa	Known RBP	5.8	□□□□□ -1.48
CHL4	YDR254W	RNR1	P21524	888 aa	Known RBP	5.8	□□□□□ -1.48
CHL4	YDR254W	RAD14	P28519	371 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	SIP1	P32578	815 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	END3	P39013	349 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	RCY1	P39531	840 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	NPP2	P39997	493 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	HXT14	P42833	540 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	ZAP1	P47043	880 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	PET130	P47065	347 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	BIO3	P50277	480 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	LIF1	P53150	421 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	SMC5	Q08204	1093 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	ACM1	Q08981	209 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	SRO7	Q12038	1033 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	VCX1	Q99385	411 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	ATP2	P00830	511 aa	Known RBP	5.8	□□□□□ -1.48
CHL4	YDR254W	RPL24A	P04449	155 aa	Known RBP	5.8	□□□□□ -1.48
CHL4	YDR254W	RFA1	P22336	621 aa	Known RBP	5.8	□□□□□ -1.48
CHL4	YDR254W	ICL1	P28240	557 aa	Predicted RBP	5.8	□□□□□ -1.48
CHL4	YDR254W	UBC6	P33296	250 aa	Predicted RBP	5.8	□□□□□ -1.48
CHL4	YDR254W	YKL071W	P36086	256 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	VPS51	P36116	164 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	NUP60	P39705	539 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	PZF1	P39933	429 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	SER3	P40054	469 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	YJL132W	P47014	750 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	YHC3	P47040	408 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	TWF1	P53250	332 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	YNL181W	P53878	407 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	YDR179W-A	Q03983	463 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	ARP10	Q04549	284 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	SMA2	Q04658	369 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	YPS7	Q06325	596 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	SNA4	Q07549	140 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	NRT1	Q08485	598 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	TMA16	Q08687	178 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	ICL2	Q12031	575 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	YDL109C	Q12103	647 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	SVS1	Q12254	260 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	ERG27	Q12452	347 aa	Known RBP	5.8	□□□□□ -1.48
CHL4	YDR254W	MTR10	Q99189	972 aa		5.8	□□□□□ -1.48
CHL4	YDR254W	COQ4	O13525	335 aa		5.79	□□□□□ -1.48
CHL4	YDR254W	GAL4	P04386	881 aa		5.79	□□□□□ -1.48
CHL4	YDR254W	RAD7	P06779	565 aa		5.79	□□□□□ -1.48
CHL4	YDR254W	PET122	P10355	254 aa		5.79	□□□□□ -1.48
CHL4	YDR254W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.79	□□□□□ -1.48	not detected
CHL4	YDR254W	CMK2	P22517	447 aa		5.79	□□□□□ -1.48
CHL4	YDR254W	ARG1	P22768	420 aa		5.79	□□□□□ -1.48
CHL4	YDR254W	MEK1	P24719	497 aa	Predicted RBP	5.79	□□□□□ -1.48
CHL4	YDR254W	SPR1	P32603	445 aa		5.79	□□□□□ -1.48
CHL4	YDR254W	HCS1	P34243	683 aa		5.79	□□□□□ -1.48
CHL4	YDR254W	APT2	P36973	181 aa		5.79	□□□□□ -1.48
CHL4	YDR254W	YBR139W	P38109	508 aa		5.79	□□□□□ -1.48
CHL4	YDR254W	POA1	P38218	177 aa		5.79	□□□□□ -1.48
CHL4	YDR254W	YHR033W	P38690	423 aa		5.79	□□□□□ -1.48
CHL4	YDR254W	RTT107	P38850	1070 aa		5.79	□□□□□ -1.48
CHL4	YDR254W	CCT6	P39079	546 aa		5.79	□□□□□ -1.48
CHL4	YDR254W	ELO3	P40319	345 aa		5.79	□□□□□ -1.48
CHL4	YDR254W	AGE2	P40529	298 aa		5.79	□□□□□ -1.48
CHL4	YDR254W	YJL107C	P42947	387 aa		5.79	□□□□□ -1.48
CHL4	YDR254W	EXG2	P52911	562 aa		5.79	□□□□□ -1.48
CHL4	YDR254W	MTC3	P53077	123 aa		5.79	□□□□□ -1.48
CHL4	YDR254W	PEF1	P53238	335 aa		5.79	□□□□□ -1.48
CHL4	YDR254W	SLX9	P53251	210 aa	Predicted RBP	5.79	□□□□□ -1.48
CHL4	YDR254W	DIP5	P53388	608 aa		5.79	□□□□□ -1.48
CHL4	YDR254W	COP1	P53622	1201 aa	Known RBP	5.79	□□□□□ -1.48
CHL4	YDR254W	BUD22	Q04347	519 aa	Known RBP	5.79	□□□□□ -1.48
CHL4	YDR254W	STE23	Q06010	1027 aa		5.79	□□□□□ -1.48
CHL4	YDR254W	STP4	Q07351	490 aa		5.79	□□□□□ -1.48
CHL4	YDR254W	YLL058W	Q12198	575 aa		5.79	□□□□□ -1.48
CHL4	YDR254W	SUL2	Q12325	893 aa		5.79	□□□□□ -1.48
CHL4	YDR254W	NDJ1	Q12366	352 aa		5.79	□□□□□ -1.48
CHL4	YDR254W	ECM5	Q03214	1411 aa		5.78	□□□□□ -1.48
CHL4	YDR254W	TUS1	Q06412	1307 aa		5.78	□□□□□ -1.48
CHL4	YDR254W	PRC1	P00729	532 aa		5.78	□□□□□ -1.48
CHL4	YDR254W	GAL80	P04387	435 aa		5.78	□□□□□ -1.48
CHL4	YDR254W	SCH9	P11792	824 aa	Known RBP	5.78	□□□□□ -1.48
CHL4	YDR254W	VPS34	P22543	875 aa		5.78	□□□□□ -1.48
CHL4	YDR254W	PEX1	P24004	1043 aa		5.78	□□□□□ -1.48
CHL4	YDR254W	HXT3	P32466	567 aa	Known RBP	5.78	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms