RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C TSC10P38342 320 aa4.4□□□□□ -1.7
PRP28YDR243C MIP6P38760 659 aaKnown RBP4.4□□□□□ -1.7
PRP28YDR243C GIC1P38785 314 aa4.4□□□□□ -1.7
PRP28YDR243C PTC7P38797 343 aa4.4□□□□□ -1.7
PRP28YDR243C NVJ1P38881 321 aa4.4□□□□□ -1.7
PRP28YDR243C AIM18P38884 321 aa4.4□□□□□ -1.7
PRP28YDR243C LYS9P38999 446 aa4.4□□□□□ -1.7
PRP28YDR243C AKR1P39010 764 aa4.4□□□□□ -1.7
PRP28YDR243C RSP5P39940 809 aaKnown RBP4.4□□□□□ -1.7
PRP28YDR243C SAH1P39954 449 aaKnown RBP4.4□□□□□ -1.7
PRP28YDR243C YIL166CP40445 542 aa4.4□□□□□ -1.7
PRP28YDR243C ICE2P40499 491 aa4.4□□□□□ -1.7
PRP28YDR243C CIN1P40987 1014 aa4.4□□□□□ -1.7
PRP28YDR243C CCT7P42943 550 aaKnown RBP4.4□□□□□ -1.7
PRP28YDR243C AIM14P53109 570 aa4.4□□□□□ -1.7
PRP28YDR243C MLC1P53141 149 aa4.4□□□□□ -1.7
PRP28YDR243C YGR021WP53212 290 aa4.4□□□□□ -1.7
PRP28YDR243C GTF1P53260 183 aaPredicted RBP4.4□□□□□ -1.7
PRP28YDR243C RSM27P53305 110 aa4.4□□□□□ -1.7
PRP28YDR243C MTD1Q02046 320 aaKnown RBP4.4□□□□□ -1.7
PRP28YDR243C SKI8Q02793 397 aaPredicted RBP4.4□□□□□ -1.7
PRP28YDR243C YMR187CQ03236 431 aa4.4□□□□□ -1.7
PRP28YDR243C SSL1Q04673 461 aaPredicted RBP4.4□□□□□ -1.7
PRP28YDR243C GAL83Q04739 417 aa4.4□□□□□ -1.7
PRP28YDR243C CIA1Q05583 330 aa4.4□□□□□ -1.7
PRP28YDR243C PHO92Q06390 306 aa4.4□□□□□ -1.7
PRP28YDR243C TDA5Q06417 326 aaKnown RBP4.4□□□□□ -1.7
PRP28YDR243C ESA1Q08649 445 aa4.4□□□□□ -1.7
PRP28YDR243C SNX3Q08826 162 aaKnown RBP4.4□□□□□ -1.7
PRP28YDR243C FLC1Q08967 793 aa4.4□□□□□ -1.7
PRP28YDR243C YOL107WQ12239 342 aa4.4□□□□□ -1.7
PRP28YDR243C LDB17Q12342 491 aa4.4□□□□□ -1.7
PRP28YDR243C MPD2Q99316 277 aa4.4□□□□□ -1.7
PRP28YDR243C DNF3Q12674 1656 aa4.4□□□□□ -1.7
PRP28YDR243C INO1P11986 533 aa4.4□□□□□ -1.71
PRP28YDR243C ENA1P13587 1091 aa4.4□□□□□ -1.71
PRP28YDR243C RNA15P25299 296 aaPredicted RBP4.4□□□□□ -1.71
PRP28YDR243C NDI1P32340 513 aa4.4□□□□□ -1.71
PRP28YDR243C NUP2P32499 720 aa4.4□□□□□ -1.71
PRP28YDR243C MSS1P32559 526 aaPredicted RBP4.4□□□□□ -1.71
PRP28YDR243C RPC25P35718 212 aa4.4□□□□□ -1.71
PRP28YDR243C CBT1P36038 271 aaPredicted RBP4.4□□□□□ -1.71
PRP28YDR243C YKL077WP36081 392 aa4.4□□□□□ -1.71
PRP28YDR243C RPF2P36160 344 aaKnown RBP4.4□□□□□ -1.71
PRP28YDR243C SPC97P38863 823 aa4.4□□□□□ -1.71
PRP28YDR243C YHR182WP38870 785 aa4.4□□□□□ -1.71
PRP28YDR243C PLB1P39105 664 aa4.4□□□□□ -1.71
PRP28YDR243C FLC2P39719 783 aa4.4□□□□□ -1.71
PRP28YDR243C ERV46P39727 415 aa4.4□□□□□ -1.71
PRP28YDR243C VAB2P40003 282 aa4.4□□□□□ -1.71
PRP28YDR243C PHM8P40025 321 aa4.4□□□□□ -1.71
PRP28YDR243C RFC2P40348 353 aa4.4□□□□□ -1.71
PRP28YDR243C MSS2P40990 351 aa4.4□□□□□ -1.71
PRP28YDR243C YJL043WP47053 257 aa4.4□□□□□ -1.71
PRP28YDR243C YJR056CP47115 236 aa4.4□□□□□ -1.71
PRP28YDR243C PMT5P52867 743 aa4.4□□□□□ -1.71
PRP28YDR243C NCS6P53088 359 aa4.4□□□□□ -1.71
PRP28YDR243C VPS62P53285 467 aa4.4□□□□□ -1.71
PRP28YDR243C PRM1P53835 661 aa4.4□□□□□ -1.71
PRP28YDR243C ENA2Q01896 1091 aa4.4□□□□□ -1.71
PRP28YDR243C RLI1Q03195 608 aaKnown RBP4.4□□□□□ -1.71
PRP28YDR243C EBS1Q03466 884 aaKnown RBP4.4□□□□□ -1.71
PRP28YDR243C RSN1Q03516 953 aa4.4□□□□□ -1.71
PRP28YDR243C YDR387CQ04162 555 aa4.4□□□□□ -1.71
PRP28YDR243C YDL086WQ07505 273 aa4.4□□□□□ -1.71
PRP28YDR243C FMP45Q07651 309 aa4.4□□□□□ -1.71
PRP28YDR243C NGL1Q08213 363 aaKnown RBP4.4□□□□□ -1.71
PRP28YDR243C LYS21Q12122 440 aaKnown RBP4.4□□□□□ -1.71
PRP28YDR243C PNS1Q12412 539 aa4.4□□□□□ -1.71
PRP28YDR243C ENA5Q12691 1091 aa4.4□□□□□ -1.71
PRP28YDR243C BCK1Q01389 1478 aa4.39□□□□□ -1.71
PRP28YDR243C MET17P06106 444 aa4.39□□□□□ -1.71
PRP28YDR243C PET9P18239 318 aaKnown RBP4.39□□□□□ -1.71
PRP28YDR243C EXO70P19658 623 aa4.39□□□□□ -1.71
PRP28YDR243C MSN1P22148 382 aa4.39□□□□□ -1.71
PRP28YDR243C PPH22P23595 377 aa4.39□□□□□ -1.71
PRP28YDR243C CTR86P25355 563 aa4.39□□□□□ -1.71
PRP28YDR243C SED4P25365 1065 aa4.39□□□□□ -1.71
PRP28YDR243C SBA1P28707 216 aaKnown RBP4.39□□□□□ -1.71
PRP28YDR243C HEM3P28789 327 aa4.39□□□□□ -1.71
PRP28YDR243C THI4P32318 326 aa4.39□□□□□ -1.71
PRP28YDR243C SCM4P32564 187 aa4.39□□□□□ -1.71
PRP28YDR243C GSP1P32835 219 aaKnown RBP4.39□□□□□ -1.71
PRP28YDR243C GSP2P32836 220 aaKnown RBP4.39□□□□□ -1.71
PRP28YDR243C NOP4P37838 685 aaKnown RBP4.39□□□□□ -1.71
PRP28YDR243C MAL32P38158 584 aa4.39□□□□□ -1.71
PRP28YDR243C YHR078WP38799 552 aa4.39□□□□□ -1.71
PRP28YDR243C MMF1P40185 145 aaKnown RBP4.39□□□□□ -1.71
PRP28YDR243C NDE1P40215 560 aa4.39□□□□□ -1.71
PRP28YDR243C YRB2P40517 327 aa4.39□□□□□ -1.71
PRP28YDR243C VHR1P40522 640 aa4.39□□□□□ -1.71
PRP28YDR243C GSM1P42950 618 aa4.39□□□□□ -1.71
PRP28YDR243C ORC5P50874 479 aa4.39□□□□□ -1.71
PRP28YDR243C IMA1P53051 589 aa4.39□□□□□ -1.71
PRP28YDR243C DOC1P53068 250 aa4.39□□□□□ -1.71
PRP28YDR243C NMA2P53204 395 aa4.39□□□□□ -1.71
PRP28YDR243C MRPS35P53292 345 aa4.39□□□□□ -1.71
PRP28YDR243C MAL12P53341 584 aa4.39□□□□□ -1.71
PRP28YDR243C YTP1P53584 459 aa4.39□□□□□ -1.71
PRP28YDR243C YNR062CP53748 327 aa4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 67.3 ms