RNA–Protein interactions for RNA: YDR085C

AFR1, Transcript of Protein required for pheromone-induced projection (shmoo) formation, yeastyeast

Gene AFR1, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFR1YDR085C FLC2P39719 783 aa2.89□□□□□ -1.95
AFR1YDR085C RPC11Q04307 110 aaPredicted RBP2.89□□□□□ -1.95
AFR1YDR085C COQ9Q05779 260 aa2.89□□□□□ -1.95
AFR1YDR085C MRPL51Q06090 140 aaPredicted RBP2.89□□□□□ -1.95
AFR1YDR085C YEH1Q07804 573 aa2.89□□□□□ -1.95
AFR1YDR085C HSH49Q99181 213 aaPredicted RBP2.89□□□□□ -1.95
AFR1YDR085C EST1P17214 699 aaPredicted RBP2.88□□□□□ -1.95
AFR1YDR085C ELO2P25358 347 aa2.88□□□□□ -1.95
AFR1YDR085C TIF5P38431 405 aaKnown RBP2.88□□□□□ -1.95
AFR1YDR085C NPR2P39923 615 aa2.88□□□□□ -1.95
AFR1YDR085C YJL132WP47014 750 aa2.88□□□□□ -1.95
AFR1YDR085C IPI3P53877 555 aa2.88□□□□□ -1.95
AFR1YDR085C YLL056CQ12177 298 aa2.88□□□□□ -1.95
AFR1YDR085C UTR4P32626 227 aa2.88□□□□□ -1.95
AFR1YDR085C PMU1P36069 295 aa2.88□□□□□ -1.95
AFR1YDR085C PCA1P38360 1216 aa2.88□□□□□ -1.95
AFR1YDR085C VID27P40157 782 aa2.88□□□□□ -1.95
AFR1YDR085C IDP2P41939 412 aa2.88□□□□□ -1.95
AFR1YDR085C TOF2Q02208 771 aa2.88□□□□□ -1.95
AFR1YDR085C IVY1Q04934 453 aa2.88□□□□□ -1.95
AFR1YDR085C YDR056CQ12025 205 aa2.88□□□□□ -1.95
AFR1YDR085C SEM1O94742 89 aa2.87□□□□□ -1.95
AFR1YDR085C ATR1P13090 542 aa2.87□□□□□ -1.95
AFR1YDR085C SHP1P34223 423 aa2.87□□□□□ -1.95
AFR1YDR085C SEF1P34228 1148 aa2.87□□□□□ -1.95
AFR1YDR085C TIF4631P39935 952 aaKnown RBP2.87□□□□□ -1.95
AFR1YDR085C NOP16P40007 231 aaKnown RBP2.87□□□□□ -1.95
AFR1YDR085C SHO1P40073 367 aa2.87□□□□□ -1.95
AFR1YDR085C ALG5P40350 334 aa2.87□□□□□ -1.95
AFR1YDR085C VID30P53076 958 aa2.87□□□□□ -1.95
AFR1YDR085C PHO92Q06390 306 aa2.87□□□□□ -1.95
AFR1YDR085C THP1Q08231 455 aa2.87□□□□□ -1.95
AFR1YDR085C SEC53P07283 254 aaKnown RBP2.86□□□□□ -1.95
AFR1YDR085C TUL1P36096 758 aa2.86□□□□□ -1.95
AFR1YDR085C DUG2P38149 878 aa2.86□□□□□ -1.95
AFR1YDR085C TCM62P38228 572 aaKnown RBP2.86□□□□□ -1.95
AFR1YDR085C ALK1P43633 760 aaKnown RBP2.86□□□□□ -1.95
AFR1YDR085C AIM22P47051 409 aa2.86□□□□□ -1.95
AFR1YDR085C UPF3P48412 387 aaKnown RBP2.86□□□□□ -1.95
AFR1YDR085C IMD4P50094 524 aaKnown RBP2.86□□□□□ -1.95
AFR1YDR085C IRC15Q02733 499 aa2.86□□□□□ -1.95
AFR1YDR085C AAC3P18238 307 aa2.86□□□□□ -1.95
AFR1YDR085C MSN2P33748 704 aa2.86□□□□□ -1.95
AFR1YDR085C BNA4P38169 460 aa2.86□□□□□ -1.95
AFR1YDR085C MSR1P38714 643 aa2.86□□□□□ -1.95
AFR1YDR085C HAT2P39984 401 aa2.86□□□□□ -1.95
AFR1YDR085C YPI1P43587 155 aa2.86□□□□□ -1.95
AFR1YDR085C SVL3Q03088 825 aaKnown RBP2.86□□□□□ -1.95
AFR1YDR085C VPS74Q06385 345 aa2.86□□□□□ -1.95
AFR1YDR085C LSP1Q12230 341 aaKnown RBP2.86□□□□□ -1.95
AFR1YDR085C ENT1Q12518 454 aa2.86□□□□□ -1.95
AFR1YDR085C YJR112W-AQ3E743 109 aa2.86□□□□□ -1.95
AFR1YDR085C SAN1P22470 610 aa2.85□□□□□ -1.95
AFR1YDR085C TCD2P36101 447 aaKnown RBP2.85□□□□□ -1.95
AFR1YDR085C YBP1P38315 674 aa2.85□□□□□ -1.95
AFR1YDR085C ALG8P40351 577 aa2.85□□□□□ -1.95
AFR1YDR085C SGN1P40561 250 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
AFR1YDR085C SPG5P42933 373 aa2.85□□□□□ -1.95
AFR1YDR085C RLM1Q12224 676 aa2.85□□□□□ -1.95
AFR1YDR085C CTF3Q12748 733 aa2.85□□□□□ -1.95
AFR1YDR085C PMR1P13586 950 aa2.84□□□□□ -1.95
AFR1YDR085C RNA14P25298 677 aaKnown RBP2.84□□□□□ -1.95
AFR1YDR085C NOP4P37838 685 aaKnown RBP2.84□□□□□ -1.95
AFR1YDR085C MRX6P48564 524 aa2.84□□□□□ -1.95
AFR1YDR085C GPI1P53306 609 aa2.84□□□□□ -1.95
AFR1YDR085C HEF3P53978 1044 aaKnown RBP2.84□□□□□ -1.95
AFR1YDR085C CTI6Q08923 506 aa2.84□□□□□ -1.95
AFR1YDR085C RCN2Q12044 265 aa2.84□□□□□ -1.95
AFR1YDR085C CFT2Q12102 859 aaPredicted RBP2.84□□□□□ -1.95
AFR1YDR085C YCL021W-AQ96VH3 125 aa2.84□□□□□ -1.95
AFR1YDR085C EXO70P19658 623 aa2.84□□□□□ -1.96
AFR1YDR085C PRP2P20095 876 aaPredicted RBP2.84□□□□□ -1.96
AFR1YDR085C PUT3P25502 979 aaPredicted RBP2.84□□□□□ -1.96
AFR1YDR085C ZPR1P53303 486 aaKnown RBP2.84□□□□□ -1.96
AFR1YDR085C MSO1P53604 210 aaKnown RBP2.84□□□□□ -1.96
AFR1YDR085C WSC2P53832 503 aa2.84□□□□□ -1.96
AFR1YDR085C FIN1Q03898 291 aa2.84□□□□□ -1.96
AFR1YDR085C RBS1Q05672 457 aaKnown RBP2.84□□□□□ -1.96
AFR1YDR085C HNT3Q08702 217 aa2.84□□□□□ -1.96
AFR1YDR085C OLE1P21147 510 aaKnown RBP2.83□□□□□ -1.96
AFR1YDR085C PRD1P25375 712 aa2.83□□□□□ -1.96
AFR1YDR085C MUM2P38236 366 aa2.83□□□□□ -1.96
AFR1YDR085C GWT1P47026 490 aa2.83□□□□□ -1.96
AFR1YDR085C SMA2Q04658 369 aa2.83□□□□□ -1.96
AFR1YDR085C VPS38Q05919 439 aa2.83□□□□□ -1.96
AFR1YDR085C KEL3Q08979 651 aaPredicted RBP2.83□□□□□ -1.96
AFR1YDR085C GLK1P17709 500 aaKnown RBP2.82□□□□□ -1.96
AFR1YDR085C PAP1P29468 568 aaKnown RBP2.82□□□□□ -1.96
AFR1YDR085C WBP1P33767 430 aaKnown RBP2.82□□□□□ -1.96
AFR1YDR085C YGR066CP53242 292 aa2.82□□□□□ -1.96
AFR1YDR085C RBG2P53295 368 aaKnown RBP2.82□□□□□ -1.96
AFR1YDR085C RKM5Q12367 367 aa2.82□□□□□ -1.96
AFR1YDR085C AVL9Q12500 764 aa2.82□□□□□ -1.96
AFR1YDR085C GAL80P04387 435 aa2.82□□□□□ -1.96
AFR1YDR085C LPD1P09624 499 aaKnown RBP2.82□□□□□ -1.96
AFR1YDR085C CBS1P14066 229 aa2.82□□□□□ -1.96
AFR1YDR085C NOP1P15646 327 aaKnown RBP2.82□□□□□ -1.96
AFR1YDR085C REG2P38232 338 aa2.82□□□□□ -1.96
AFR1YDR085C MBB1P39534 108 aa2.82□□□□□ -1.96
AFR1YDR085C ELP2P42935 788 aa2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 89.4 ms