RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W PIL1P53252 339 aaKnown RBP2.58□□□□□ -2
VPS41YDR080W IPI3P53877 555 aa2.58□□□□□ -2
VPS41YDR080W RAD33Q04231 177 aa2.58□□□□□ -2
VPS41YDR080W MLH2Q07980 695 aa2.58□□□□□ -2
VPS41YDR080W AIM41Q12032 185 aa2.58□□□□□ -2
VPS41YDR080W MTF2P10849 440 aa2.57□□□□□ -2
VPS41YDR080W XRS2P33301 854 aa2.57□□□□□ -2
VPS41YDR080W CPR7P47103 393 aa2.57□□□□□ -2
VPS41YDR080W PEX31P53203 462 aa2.57□□□□□ -2
VPS41YDR080W YLR297WQ05899 129 aa2.57□□□□□ -2
VPS41YDR080W YPL216WQ08964 1102 aa2.57□□□□□ -2
VPS41YDR080W PRS5Q12265 496 aaKnown RBP2.57□□□□□ -2
VPS41YDR080W IPP1P00817 287 aaKnown RBP2.57□□□□□ -2
VPS41YDR080W SCL1P21243 252 aaKnown RBP2.57□□□□□ -2
VPS41YDR080W MAK32P23060 363 aa2.57□□□□□ -2
VPS41YDR080W SNT1P25357 1226 aa2.57□□□□□ -2
VPS41YDR080W CIN8P27895 1000 aa2.57□□□□□ -2
VPS41YDR080W MRP4P32902 394 aa2.57□□□□□ -2
VPS41YDR080W TMA108P40462 946 aa2.57□□□□□ -2
VPS41YDR080W NMD5P46970 1048 aa2.57□□□□□ -2
VPS41YDR080W BIR1P47134 954 aa2.57□□□□□ -2
VPS41YDR080W RSC9Q03124 581 aa2.57□□□□□ -2
VPS41YDR080W YDR131CQ03899 556 aa2.57□□□□□ -2
VPS41YDR080W ARO80Q04052 950 aa2.57□□□□□ -2
VPS41YDR080W TAF9Q05027 157 aa2.57□□□□□ -2
VPS41YDR080W COG4Q06096 861 aa2.57□□□□□ -2
VPS41YDR080W KAP95Q06142 861 aaKnown RBP2.57□□□□□ -2
VPS41YDR080W DIS3Q08162 1001 aaKnown RBP2.57□□□□□ -2
VPS41YDR080W SFI1Q12369 946 aa2.57□□□□□ -2
VPS41YDR080W VPS5Q92331 675 aa2.57□□□□□ -2
VPS41YDR080W JIP3O13555 125 aa2.56□□□□□ -2
VPS41YDR080W AAC1P04710 309 aa2.56□□□□□ -2
VPS41YDR080W SEC62P21825 274 aa2.56□□□□□ -2
VPS41YDR080W GDA1P32621 518 aa2.56□□□□□ -2
VPS41YDR080W PXL1P36166 706 aa2.56□□□□□ -2
VPS41YDR080W SER33P40510 469 aa2.56□□□□□ -2
VPS41YDR080W ERV41Q04651 352 aa2.56□□□□□ -2
VPS41YDR080W YAP7Q08182 245 aa2.56□□□□□ -2
VPS41YDR080W VPS54Q12071 889 aa2.56□□□□□ -2
VPS41YDR080W HSP42Q12329 375 aa2.56□□□□□ -2
VPS41YDR080W RPL19AP0CX82 189 aaKnown RBP2.56□□□□□ -2
VPS41YDR080W RPL19BP0CX83 189 aaPredicted RBP2.56□□□□□ -2
VPS41YDR080W MIA40P36046 403 aa2.56□□□□□ -2
VPS41YDR080W YAL037WP39728 267 aa2.56□□□□□ -2
VPS41YDR080W GAT1P43574 510 aa2.56□□□□□ -2
VPS41YDR080W PUS4P48567 403 aaKnown RBP2.56□□□□□ -2
VPS41YDR080W TEP1P53916 434 aa2.56□□□□□ -2
VPS41YDR080W EGD1Q02642 157 aaKnown RBP2.56□□□□□ -2
VPS41YDR080W PIR1Q03178 341 aa2.56□□□□□ -2
VPS41YDR080W YLR046CQ12253 270 aa2.56□□□□□ -2
VPS41YDR080W ARP7Q12406 477 aa2.56□□□□□ -2
VPS41YDR080W BRR2P32639 2163 aaKnown RBP2.56□□□□□ -2
VPS41YDR080W YPK1P12688 680 aaKnown RBP2.55□□□□□ -2
VPS41YDR080W ARF2P19146 181 aaKnown RBP2.55□□□□□ -2
VPS41YDR080W MNE1P24720 663 aa2.55□□□□□ -2
VPS41YDR080W CWP1P28319 239 aa2.55□□□□□ -2
VPS41YDR080W SDH8P38345 138 aa2.55□□□□□ -2
VPS41YDR080W EFM2P38347 419 aa2.55□□□□□ -2
VPS41YDR080W FAU1P40099 211 aa2.55□□□□□ -2
VPS41YDR080W ATP23P53722 227 aa2.55□□□□□ -2
VPS41YDR080W SPG3Q04398 127 aaPredicted RBP2.55□□□□□ -2
VPS41YDR080W FMP45Q07651 309 aa2.55□□□□□ -2
VPS41YDR080W SLX4Q12098 748 aa2.55□□□□□ -2
VPS41YDR080W YOR338WQ99326 363 aa2.55□□□□□ -2
VPS41YDR080W YKR104WP0CE69 306 aa2.55□□□□□ -2
VPS41YDR080W GEX1P25596 615 aa2.55□□□□□ -2
VPS41YDR080W RDS1P25611 832 aa2.55□□□□□ -2
VPS41YDR080W GEX2P36173 615 aa2.55□□□□□ -2
VPS41YDR080W MRPL37P36532 105 aa2.55□□□□□ -2
VPS41YDR080W PIM1P36775 1133 aa2.55□□□□□ -2
VPS41YDR080W MTG2P38860 518 aa2.55□□□□□ -2
VPS41YDR080W PRM9P39551 298 aa2.55□□□□□ -2
VPS41YDR080W RPS10BP46784 105 aaKnown RBP2.55□□□□□ -2
VPS41YDR080W CYK3Q07533 885 aa2.55□□□□□ -2
VPS41YDR080W RPS10AQ08745 105 aaPredicted RBP2.55□□□□□ -2
VPS41YDR080W RDL1Q12305 139 aaKnown RBP2.55□□□□□ -2
VPS41YDR080W DBP10Q12389 995 aaKnown RBP2.55□□□□□ -2
VPS41YDR080W MDM35O60200 86 aa2.55□□□□□ -2
VPS41YDR080W PUT4P15380 627 aa2.55□□□□□ -2
VPS41YDR080W YIH1P25637 258 aa2.55□□□□□ -2
VPS41YDR080W BEM3P32873 1128 aa2.55□□□□□ -2
VPS41YDR080W LOT5P34234 306 aa2.55□□□□□ -2
VPS41YDR080W IMD2P38697 523 aaKnown RBP2.55□□□□□ -2
VPS41YDR080W RRP3P38712 501 aaKnown RBP2.55□□□□□ -2
VPS41YDR080W RPH1P39956 796 aa2.55□□□□□ -2
VPS41YDR080W CIS3P47001 227 aa2.55□□□□□ -2
VPS41YDR080W GLG2P47011 380 aa2.55□□□□□ -2
VPS41YDR080W IMD3P50095 523 aaKnown RBP2.55□□□□□ -2
VPS41YDR080W SND1Q04007 877 aa2.55□□□□□ -2
VPS41YDR080W DIC1Q06143 298 aa2.55□□□□□ -2
VPS41YDR080W BSC6Q08280 497 aa2.55□□□□□ -2
VPS41YDR080W RRP6Q12149 733 aaKnown RBP2.55□□□□□ -2
VPS41YDR080W YBR056W-AI2HB52 66 aa2.54□□□□□ -2
VPS41YDR080W YMR085WP0CF18 432 aa2.54□□□□□ -2
VPS41YDR080W EST1P17214 699 aaPredicted RBP2.54□□□□□ -2
VPS41YDR080W PHO84P25297 587 aaKnown RBP2.54□□□□□ -2
VPS41YDR080W PRE2P30656 287 aaKnown RBP2.54□□□□□ -2
VPS41YDR080W RPC34P32910 317 aa2.54□□□□□ -2
VPS41YDR080W MAL33P38157 468 aa2.54□□□□□ -2
VPS41YDR080W MSR1P38714 643 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms