RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W DIA3P52290 468 aa9.28□□□□□ -0.92
SED1YDR077W MDM34P53083 459 aa9.28□□□□□ -0.92
SED1YDR077W NPY1P53164 384 aa9.28□□□□□ -0.92
SED1YDR077W GET1P53192 235 aa9.28□□□□□ -0.92
SED1YDR077W YGR015CP53208 328 aa9.28□□□□□ -0.92
SED1YDR077W YGR016WP53209 190 aa9.28□□□□□ -0.92
SED1YDR077W YNR061CP53747 219 aa9.28□□□□□ -0.92
SED1YDR077W TDA7P53882 636 aaPredicted RBP9.28□□□□□ -0.92
SED1YDR077W AQR1P53943 586 aa9.28□□□□□ -0.92
SED1YDR077W IDP3P53982 420 aaKnown RBP9.28□□□□□ -0.92
SED1YDR077W YDR124WQ04608 324 aa9.28□□□□□ -0.92
SED1YDR077W RAD34Q06665 692 aa9.28□□□□□ -0.92
SED1YDR077W ATG10Q07879 167 aa9.28□□□□□ -0.92
SED1YDR077W OPI10Q08202 246 aa9.28□□□□□ -0.92
SED1YDR077W THP2O13539 261 aaKnown RBP9.27□□□□□ -0.93
SED1YDR077W PRT1P06103 763 aaKnown RBP9.27□□□□□ -0.93
SED1YDR077W MSS18P08593 268 aa9.27□□□□□ -0.93
SED1YDR077W MSS116P15424 664 aaKnown RBP9.27□□□□□ -0.93
SED1YDR077W CHL1P22516 861 aaPredicted RBP9.27□□□□□ -0.93
SED1YDR077W ERG6P25087 383 aaKnown RBP9.27□□□□□ -0.93
SED1YDR077W BUD14P27637 709 aa9.27□□□□□ -0.93
SED1YDR077W SWH1P35845 1188 aa9.27□□□□□ -0.93
SED1YDR077W GIP4P39732 760 aa9.27□□□□□ -0.93
SED1YDR077W AYR1P40471 297 aa9.27□□□□□ -0.93
SED1YDR077W SEC27P41811 889 aaKnown RBP9.27□□□□□ -0.93
SED1YDR077W YGL176CP46945 554 aa9.27□□□□□ -0.93
SED1YDR077W BIR1P47134 954 aa9.27□□□□□ -0.93
SED1YDR077W UPF3P48412 387 aaKnown RBP9.27□□□□□ -0.93
SED1YDR077W NBP35P52920 328 aa9.27□□□□□ -0.93
SED1YDR077W MTO1P53070 669 aa9.27□□□□□ -0.93
SED1YDR077W MPS2P53159 387 aa9.27□□□□□ -0.93
SED1YDR077W GMC2Q06201 188 aa9.27□□□□□ -0.93
SED1YDR077W YPR084WQ06821 456 aa9.27□□□□□ -0.93
SED1YDR077W TRM8Q12009 286 aa9.27□□□□□ -0.93
SED1YDR077W YPL245WQ12179 454 aaKnown RBP9.27□□□□□ -0.93
SED1YDR077W YPR011CQ12251 326 aa9.27□□□□□ -0.93
SED1YDR077W BRR1Q99177 341 aaPredicted RBP9.27□□□□□ -0.93
SED1YDR077W RAS2P01120 322 aaKnown RBP9.26□□□□□ -0.93
SED1YDR077W DST1P07273 309 aa9.26□□□□□ -0.93
SED1YDR077W CLN2P20438 545 aa9.26□□□□□ -0.93
SED1YDR077W YSR3P23501 404 aa9.26□□□□□ -0.93
SED1YDR077W AAR2P32357 355 aaPredicted RBP9.26□□□□□ -0.93
SED1YDR077W DPH5P32469 300 aaPredicted RBP9.26□□□□□ -0.93
SED1YDR077W INM1P38710 295 aa9.26□□□□□ -0.93
SED1YDR077W YHR127WP38833 243 aaKnown RBP9.26□□□□□ -0.93
SED1YDR077W GIM4P40005 111 aaKnown RBP9.26□□□□□ -0.93
SED1YDR077W PFA3P42836 336 aa9.26□□□□□ -0.93
SED1YDR077W NOP9P47077 666 aaKnown RBP9.26□□□□□ -0.93
SED1YDR077W YJR030CP47101 745 aa9.26□□□□□ -0.93
SED1YDR077W YJR142WP47173 342 aa9.26□□□□□ -0.93
SED1YDR077W GPI1P53306 609 aa9.26□□□□□ -0.93
SED1YDR077W MAP1Q01662 387 aaKnown RBP RIP-Chip data9.26□□□□□ -0.93not detected
SED1YDR077W RPM2Q02773 1202 aa9.26□□□□□ -0.93
SED1YDR077W HOT1Q03213 719 aa9.26□□□□□ -0.93
SED1YDR077W VHS1Q03785 461 aa9.26□□□□□ -0.93
SED1YDR077W ATG29Q12092 213 aa9.26□□□□□ -0.93
SED1YDR077W YVC1Q12324 675 aa9.26□□□□□ -0.93
SED1YDR077W JLP1Q12358 412 aa9.26□□□□□ -0.93
SED1YDR077W FAB1P34756 2278 aa9.26□□□□□ -0.93
SED1YDR077W YPR117WQ06116 2489 aa9.26□□□□□ -0.93
SED1YDR077W ARG3P05150 338 aa9.25□□□□□ -0.93
SED1YDR077W FUM1P08417 488 aaKnown RBP9.25□□□□□ -0.93
SED1YDR077W RPS4AP0CX35 261 aaKnown RBP9.25□□□□□ -0.93
SED1YDR077W RPS4BP0CX36 261 aaKnown RBP9.25□□□□□ -0.93
SED1YDR077W MRP13P12686 339 aa9.25□□□□□ -0.93
SED1YDR077W GCD2P12754 651 aaPredicted RBP9.25□□□□□ -0.93
SED1YDR077W TOP3P13099 656 aa9.25□□□□□ -0.93
SED1YDR077W YAK1P14680 807 aa9.25□□□□□ -0.93
SED1YDR077W RVS161P25343 265 aaKnown RBP9.25□□□□□ -0.93
SED1YDR077W NGG1P32494 702 aa9.25□□□□□ -0.93
SED1YDR077W AST1P35183 429 aa9.25□□□□□ -0.93
SED1YDR077W SPT23P35210 1082 aa9.25□□□□□ -0.93
SED1YDR077W MRPL17P36528 281 aa9.25□□□□□ -0.93
SED1YDR077W SOL2P37262 315 aa9.25□□□□□ -0.93
SED1YDR077W ROT2P38138 954 aa9.25□□□□□ -0.93
SED1YDR077W RIO2P40160 425 aaKnown RBP9.25□□□□□ -0.93
SED1YDR077W SEC26P41810 973 aaKnown RBP9.25□□□□□ -0.93
SED1YDR077W PTR3P43606 678 aa9.25□□□□□ -0.93
SED1YDR077W MET12P46151 657 aa9.25□□□□□ -0.93
SED1YDR077W COQ5P49017 307 aa9.25□□□□□ -0.93
SED1YDR077W YNL033WP53964 284 aa9.25□□□□□ -0.93
SED1YDR077W YNL019CP53975 284 aa9.25□□□□□ -0.93
SED1YDR077W ECM9Q02202 377 aa9.25□□□□□ -0.93
SED1YDR077W IRC15Q02733 499 aa9.25□□□□□ -0.93
SED1YDR077W NAN1Q02931 896 aaKnown RBP9.25□□□□□ -0.93
SED1YDR077W SVL3Q03088 825 aaKnown RBP9.25□□□□□ -0.93
SED1YDR077W EFR3Q03653 782 aaKnown RBP9.25□□□□□ -0.93
SED1YDR077W VPS68Q12016 184 aa9.25□□□□□ -0.93
SED1YDR077W ULA1Q12059 462 aa9.25□□□□□ -0.93
SED1YDR077W TAF3Q12297 353 aa9.25□□□□□ -0.93
SED1YDR077W Q0182Q9ZZW1 134 aa9.25□□□□□ -0.93
SED1YDR077W ARG81P05085 880 aa9.24□□□□□ -0.93
SED1YDR077W TUB1P09733 447 aaKnown RBP9.24□□□□□ -0.93
SED1YDR077W PEX6P33760 1030 aa9.24□□□□□ -0.93
SED1YDR077W PDX3P38075 228 aaKnown RBP9.24□□□□□ -0.93
SED1YDR077W TDP1P38319 544 aa9.24□□□□□ -0.93
SED1YDR077W BEM4P39011 633 aa9.24□□□□□ -0.93
SED1YDR077W DSS1P39112 969 aa9.24□□□□□ -0.93
SED1YDR077W YEL073CP39974 107 aa9.24□□□□□ -0.93
SED1YDR077W NDE1P40215 560 aa9.24□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms