RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C PEP5P12868 1029 aa5.67□□□□□ -1.5
MDH3YDL078C GLN4P13188 809 aaKnown RBP5.67□□□□□ -1.5
MDH3YDL078C MRPL25P23369 157 aa5.67□□□□□ -1.5
MDH3YDL078C CDC20P26309 610 aa5.67□□□□□ -1.5
MDH3YDL078C SSE1P32589 693 aaKnown RBP5.67□□□□□ -1.5
MDH3YDL078C SPR1P32603 445 aa5.67□□□□□ -1.5
MDH3YDL078C PRP18P33411 251 aaPredicted RBP5.67□□□□□ -1.5
MDH3YDL078C YKR015CP36111 568 aa5.67□□□□□ -1.5
MDH3YDL078C VPS51P36116 164 aa5.67□□□□□ -1.5
MDH3YDL078C GMH1P36125 273 aa5.67□□□□□ -1.5
MDH3YDL078C PCL5P38794 229 aa5.67□□□□□ -1.5
MDH3YDL078C YHR219WP38900 624 aa5.67□□□□□ -1.5
MDH3YDL078C REV7P38927 245 aa5.67□□□□□ -1.5
MDH3YDL078C TIM17P39515 158 aa5.67□□□□□ -1.5
MDH3YDL078C ELO1P39540 310 aa5.67□□□□□ -1.5
MDH3YDL078C LTP1P40347 161 aa5.67□□□□□ -1.5
MDH3YDL078C GTS1P40956 396 aa5.67□□□□□ -1.5
MDH3YDL078C NUP85P46673 744 aa5.67□□□□□ -1.5
MDH3YDL078C APS3P47064 194 aa5.67□□□□□ -1.5
MDH3YDL078C BIR1P47134 954 aa5.67□□□□□ -1.5
MDH3YDL078C SRB7P47822 140 aa5.67□□□□□ -1.5
MDH3YDL078C ARX1Q03862 593 aaKnown RBP5.67□□□□□ -1.5
MDH3YDL078C RSM24Q03976 319 aa5.67□□□□□ -1.5
MDH3YDL078C YMR027WQ04371 470 aa5.67□□□□□ -1.5
MDH3YDL078C YML096WQ04489 525 aa5.67□□□□□ -1.5
MDH3YDL078C ENT2Q05785 613 aa5.67□□□□□ -1.5
MDH3YDL078C BLS1Q06071 122 aa5.67□□□□□ -1.5
MDH3YDL078C VTA1Q06263 330 aa5.67□□□□□ -1.5
MDH3YDL078C PLB3Q08108 686 aa5.67□□□□□ -1.5
MDH3YDL078C CUE5Q08412 411 aaKnown RBP5.67□□□□□ -1.5
MDH3YDL078C SLD7Q08457 257 aa5.67□□□□□ -1.5
MDH3YDL078C TRM8Q12009 286 aa5.67□□□□□ -1.5
MDH3YDL078C RTC5Q12108 567 aaKnown RBP5.67□□□□□ -1.5
MDH3YDL078C BBP1Q12365 385 aa5.67□□□□□ -1.5
MDH3YDL078C GTT2Q12390 233 aa5.67□□□□□ -1.5
MDH3YDL078C DAT1P13483 248 aaKnown RBP5.66□□□□□ -1.5
MDH3YDL078C ATP12P22135 325 aa5.66□□□□□ -1.5
MDH3YDL078C DPB2P24482 689 aaPredicted RBP5.66□□□□□ -1.5
MDH3YDL078C MRPL9P31334 269 aa5.66□□□□□ -1.5
MDH3YDL078C TPS2P31688 896 aaKnown RBP5.66□□□□□ -1.5
MDH3YDL078C TOM20P35180 183 aa5.66□□□□□ -1.5
MDH3YDL078C ATP3P38077 311 aaKnown RBP5.66□□□□□ -1.5
MDH3YDL078C SNL1P40548 159 aa5.66□□□□□ -1.5
MDH3YDL078C RLP7P40693 322 aaKnown RBP5.66□□□□□ -1.5
MDH3YDL078C YNL320WP42840 284 aa5.66□□□□□ -1.5
MDH3YDL078C YFL012WP43580 148 aa5.66□□□□□ -1.5
MDH3YDL078C TMA22P47089 198 aaPredicted RBP5.66□□□□□ -1.5
MDH3YDL078C SSN8P47821 323 aa5.66□□□□□ -1.5
MDH3YDL078C RNR4P49723 345 aaKnown RBP5.66□□□□□ -1.5
MDH3YDL078C TEL2P53038 688 aa5.66□□□□□ -1.5
MDH3YDL078C MON1P53129 644 aa5.66□□□□□ -1.5
MDH3YDL078C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
MDH3YDL078C SRP1Q02821 542 aaKnown RBP5.66□□□□□ -1.5
MDH3YDL078C HFD1Q04458 532 aa5.66□□□□□ -1.5
MDH3YDL078C BNA5Q05979 453 aa5.66□□□□□ -1.5
MDH3YDL078C YLR456WQ06199 204 aa5.66□□□□□ -1.5
MDH3YDL078C UIP4Q08926 304 aa5.66□□□□□ -1.5
MDH3YDL078C YOR289WQ12012 251 aaPredicted RBP5.66□□□□□ -1.5
MDH3YDL078C ACF2Q12168 779 aa5.66□□□□□ -1.5
MDH3YDL078C MED4Q12343 284 aa5.66□□□□□ -1.5
MDH3YDL078C YOR012WQ12351 137 aa5.66□□□□□ -1.5
MDH3YDL078C STB3Q12427 513 aa5.66□□□□□ -1.5
MDH3YDL078C RMP1Q12530 201 aa5.66□□□□□ -1.5
MDH3YDL078C BRR2P32639 2163 aaKnown RBP5.65□□□□□ -1.5
MDH3YDL078C CDC8P00572 216 aa5.65□□□□□ -1.5
MDH3YDL078C PDE2P06776 526 aa5.65□□□□□ -1.5
MDH3YDL078C CDC4P07834 779 aa5.65□□□□□ -1.5
MDH3YDL078C ERG20P08524 352 aaKnown RBP5.65□□□□□ -1.5
MDH3YDL078C RPL1AP0CX43 217 aaKnown RBP5.65□□□□□ -1.5
MDH3YDL078C RPL1BP0CX44 217 aaKnown RBP5.65□□□□□ -1.5
MDH3YDL078C GPA2P10823 449 aa5.65□□□□□ -1.5
MDH3YDL078C RED1P14291 827 aa5.65□□□□□ -1.5
MDH3YDL078C NSP1P14907 823 aaKnown RBP5.65□□□□□ -1.5
MDH3YDL078C AMD1P15274 810 aaKnown RBP5.65□□□□□ -1.5
MDH3YDL078C SCL1P21243 252 aaKnown RBP5.65□□□□□ -1.5
MDH3YDL078C MSB1P21339 1137 aaKnown RBP5.65□□□□□ -1.5
MDH3YDL078C APN1P22936 367 aa5.65□□□□□ -1.5
MDH3YDL078C PPH21P23594 369 aa5.65□□□□□ -1.5
MDH3YDL078C CLB2P24869 491 aa5.65□□□□□ -1.5
MDH3YDL078C BEM1P29366 551 aa5.65□□□□□ -1.5
MDH3YDL078C SIN4P32259 974 aa5.65□□□□□ -1.5
MDH3YDL078C GDA1P32621 518 aa5.65□□□□□ -1.5
MDH3YDL078C PTR2P32901 601 aa5.65□□□□□ -1.5
MDH3YDL078C MRT4P33201 236 aaKnown RBP5.65□□□□□ -1.5
MDH3YDL078C CPR5P35176 225 aa5.65□□□□□ -1.5
MDH3YDL078C HEK2P38199 381 aaKnown RBP RIP-Chip data5.65□□□□□ -1.5not detected
MDH3YDL078C OCA5P38738 679 aa5.65□□□□□ -1.5
MDH3YDL078C QDR1P40475 563 aa5.65□□□□□ -1.5
MDH3YDL078C AXL1P40851 1208 aa5.65□□□□□ -1.5
MDH3YDL078C YJL107CP42947 387 aa5.65□□□□□ -1.5
MDH3YDL078C CIS3P47001 227 aa5.65□□□□□ -1.5
MDH3YDL078C NNF1P47149 201 aa5.65□□□□□ -1.5
MDH3YDL078C GPI8P49018 411 aa5.65□□□□□ -1.5
MDH3YDL078C YAT1P80235 687 aa5.65□□□□□ -1.5
MDH3YDL078C OSH6Q02201 448 aa5.65□□□□□ -1.5
MDH3YDL078C YPL109CQ02981 657 aa5.65□□□□□ -1.5
MDH3YDL078C RCO1Q04779 684 aa5.65□□□□□ -1.5
MDH3YDL078C ADE13Q05911 482 aaKnown RBP5.65□□□□□ -1.5
MDH3YDL078C YLR031WQ07978 186 aa5.65□□□□□ -1.5
MDH3YDL078C RKM5Q12367 367 aa5.65□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 125.9 ms