RNA–Protein interactions for RNA: YCR093W

CDC39, Transcript of Component of the CCR4-NOT1 core complex, yeastyeast

Gene CDC39, Length 6,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC39YCR093W NDE1P40215 560 aa1.21□□□□□ -2.22
CDC39YCR093W SPO22P40511 975 aa1.21□□□□□ -2.22
CDC39YCR093W YJL055WP47044 245 aa1.21□□□□□ -2.22
CDC39YCR093W PIB2P53191 635 aa1.21□□□□□ -2.22
CDC39YCR093W MRPL19P53875 158 aa1.21□□□□□ -2.22
CDC39YCR093W SMA1Q02651 245 aa1.21□□□□□ -2.22
CDC39YCR093W CYK3Q07533 885 aa1.21□□□□□ -2.22
CDC39YCR093W GLE1Q12315 538 aa1.21□□□□□ -2.22
CDC39YCR093W RPB2P08518 1224 aaKnown RBP1.21□□□□□ -2.22
CDC39YCR093W YML002WP0CF17 737 aa1.21□□□□□ -2.22
CDC39YCR093W STE4P18851 423 aa1.21□□□□□ -2.22
CDC39YCR093W YCK1P23291 538 aa1.21□□□□□ -2.22
CDC39YCR093W YBR225WP38321 900 aa1.21□□□□□ -2.22
CDC39YCR093W GDI1P39958 451 aaKnown RBP1.21□□□□□ -2.22
CDC39YCR093W STB2P46679 850 aa1.21□□□□□ -2.22
CDC39YCR093W COS5P47187 383 aa1.21□□□□□ -2.22
CDC39YCR093W DSD1P53095 428 aa1.21□□□□□ -2.22
CDC39YCR093W TRM112P53738 135 aaPredicted RBP1.21□□□□□ -2.22
CDC39YCR093W TOF1P53840 1238 aa1.21□□□□□ -2.22
CDC39YCR093W RRB1Q04225 511 aaKnown RBP1.21□□□□□ -2.22
CDC39YCR093W RSF1Q05043 376 aa1.21□□□□□ -2.22
CDC39YCR093W COS7Q07788 383 aa1.21□□□□□ -2.22
CDC39YCR093W BUD7Q08754 746 aa1.21□□□□□ -2.22
CDC39YCR093W PPT2Q12036 173 aa1.21□□□□□ -2.22
CDC39YCR093W LDB17Q12342 491 aa1.21□□□□□ -2.22
CDC39YCR093W ERP4Q12450 207 aa1.21□□□□□ -2.22
CDC39YCR093W YIL002W-AQ3E7Z5 69 aa1.21□□□□□ -2.22
CDC39YCR093W HSH49Q99181 213 aaPredicted RBP1.21□□□□□ -2.22
CDC39YCR093W SNQ2P32568 1501 aaKnown RBP1.21□□□□□ -2.22
CDC39YCR093W TOP2P06786 1428 aaKnown RBP1.21□□□□□ -2.22
CDC39YCR093W PRP4P20053 465 aaKnown RBP1.21□□□□□ -2.22
CDC39YCR093W SAN1P22470 610 aa1.21□□□□□ -2.22
CDC39YCR093W RPI1P23250 407 aaKnown RBP1.21□□□□□ -2.22
CDC39YCR093W GID7P25569 745 aa1.21□□□□□ -2.22
CDC39YCR093W AAD3P25612 363 aa1.21□□□□□ -2.22
CDC39YCR093W SYN8P31377 255 aa1.21□□□□□ -2.22
CDC39YCR093W ARO9P38840 513 aaPredicted RBP1.21□□□□□ -2.22
CDC39YCR093W TPA1P40032 644 aaKnown RBP1.21□□□□□ -2.22
CDC39YCR093W PRM1P53835 661 aa1.21□□□□□ -2.22
CDC39YCR093W PNG1Q02890 363 aa1.21□□□□□ -2.22
CDC39YCR093W YLR455WQ06188 304 aa1.21□□□□□ -2.22
CDC39YCR093W APL5Q08951 932 aaKnown RBP1.21□□□□□ -2.22
CDC39YCR093W YPL199CQ08954 240 aa1.21□□□□□ -2.22
CDC39YCR093W DIN7Q12086 430 aa1.21□□□□□ -2.22
CDC39YCR093W HIF1Q12373 385 aa1.21□□□□□ -2.22
CDC39YCR093W HMS1Q12398 434 aa1.21□□□□□ -2.22
CDC39YCR093W NBL1Q3E7Y6 73 aa1.21□□□□□ -2.22
CDC39YCR093W MYO4P32492 1471 aa1.2□□□□□ -2.22
CDC39YCR093W PDX1P16451 410 aa1.2□□□□□ -2.22
CDC39YCR093W ERG6P25087 383 aaKnown RBP1.2□□□□□ -2.22
CDC39YCR093W SLM5P25345 492 aaKnown RBP1.2□□□□□ -2.22
CDC39YCR093W VHC1P38329 1120 aa1.2□□□□□ -2.22
CDC39YCR093W ELO1P39540 310 aa1.2□□□□□ -2.22
CDC39YCR093W IES5P40060 125 aa1.2□□□□□ -2.22
CDC39YCR093W TDA10P42938 290 aa1.2□□□□□ -2.22
CDC39YCR093W PET130P47065 347 aa1.2□□□□□ -2.22
CDC39YCR093W SCW4P53334 386 aaKnown RBP1.2□□□□□ -2.22
CDC39YCR093W ENT4Q07872 247 aa1.2□□□□□ -2.22
CDC39YCR093W RRG1Q12167 365 aaPredicted RBP1.2□□□□□ -2.22
CDC39YCR093W YRF1-4O13559 1382 aa1.2□□□□□ -2.22
CDC39YCR093W ARD1P07347 238 aaPredicted RBP1.2□□□□□ -2.22
CDC39YCR093W RPL3P14126 387 aaKnown RBP1.2□□□□□ -2.22
CDC39YCR093W CPR2P23285 205 aa1.2□□□□□ -2.22
CDC39YCR093W GDA1P32621 518 aa1.2□□□□□ -2.22
CDC39YCR093W SET3P36124 751 aa1.2□□□□□ -2.22
CDC39YCR093W YFL067WP43537 175 aa1.2□□□□□ -2.22
CDC39YCR093W PIL1P53252 339 aaKnown RBP1.2□□□□□ -2.22
CDC39YCR093W RRP46P53256 223 aaPredicted RBP1.2□□□□□ -2.22
CDC39YCR093W SKO1Q02100 647 aa1.2□□□□□ -2.22
CDC39YCR093W YDL218WQ07629 317 aa1.2□□□□□ -2.22
CDC39YCR093W SHS1Q07657 551 aa1.2□□□□□ -2.22
CDC39YCR093W THP1Q08231 455 aa1.2□□□□□ -2.22
CDC39YCR093W HHF1P02309 103 aaKnown RBP1.2□□□□□ -2.22
CDC39YCR093W PMS1P14242 873 aa1.2□□□□□ -2.22
CDC39YCR093W STE50P25344 346 aa1.2□□□□□ -2.22
CDC39YCR093W NDI1P32340 513 aa1.2□□□□□ -2.22
CDC39YCR093W NPL6P32832 435 aa1.2□□□□□ -2.22
CDC39YCR093W ASK1P35734 292 aa1.2□□□□□ -2.22
CDC39YCR093W PCI8P40512 444 aa1.2□□□□□ -2.22
CDC39YCR093W YIL024CP40543 189 aa1.2□□□□□ -2.22
CDC39YCR093W MET28P40573 187 aa1.2□□□□□ -2.22
CDC39YCR093W SNM1P40993 198 aa1.2□□□□□ -2.22
CDC39YCR093W MDV1P47025 714 aa1.2□□□□□ -2.22
CDC39YCR093W YJR154WP47181 346 aa1.2□□□□□ -2.22
CDC39YCR093W IRC15Q02733 499 aa1.2□□□□□ -2.22
CDC39YCR093W LOT6Q07923 191 aa1.2□□□□□ -2.22
CDC39YCR093W RRI1Q12468 440 aa1.2□□□□□ -2.22
CDC39YCR093W YDL007C-AQ2V2Q0 85 aa1.2□□□□□ -2.22
CDC39YCR093W COX1P00401 534 aa1.2□□□□□ -2.22
CDC39YCR093W MRPL8P22353 238 aa1.2□□□□□ -2.22
CDC39YCR093W MRE11P32829 692 aa1.2□□□□□ -2.22
CDC39YCR093W PTR2P32901 601 aa1.2□□□□□ -2.22
CDC39YCR093W SDH3P33421 198 aa1.2□□□□□ -2.22
CDC39YCR093W YHR097CP38809 366 aaKnown RBP1.2□□□□□ -2.22
CDC39YCR093W DOT5P40553 215 aa1.2□□□□□ -2.22
CDC39YCR093W YFL015CP43578 164 aa1.2□□□□□ -2.22
CDC39YCR093W YOL159CQ08300 171 aa1.2□□□□□ -2.22
CDC39YCR093W FRE3Q08905 711 aa1.2□□□□□ -2.22
CDC39YCR093W IDH2P28241 369 aaKnown RBP1.2□□□□□ -2.22
CDC39YCR093W BRF1P29056 596 aa1.2□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms