RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B ESA1Q08649 445 aa1.59□□□□□ -2.15
HTL1YCR020W-B TCO89Q08921 799 aa1.59□□□□□ -2.15
HTL1YCR020W-B SUP35P05453 685 aaKnown RBP1.58□□□□□ -2.16
HTL1YCR020W-B HIP1P06775 603 aa1.58□□□□□ -2.16
HTL1YCR020W-B RAD52P06778 471 aaKnown RBP1.58□□□□□ -2.16
HTL1YCR020W-B YCR007CP25354 239 aa1.58□□□□□ -2.16
HTL1YCR020W-B IMG1P25626 169 aa1.58□□□□□ -2.16
HTL1YCR020W-B YJR154WP47181 346 aa1.58□□□□□ -2.16
HTL1YCR020W-B LYS4P49367 693 aaPredicted RBP1.58□□□□□ -2.16
HTL1YCR020W-B CAF40P53829 373 aa1.58□□□□□ -2.16
HTL1YCR020W-B GOR1P53839 350 aa1.58□□□□□ -2.16
HTL1YCR020W-B RNY1Q02933 434 aaKnown RBP1.58□□□□□ -2.16
HTL1YCR020W-B TSR1Q07381 788 aaKnown RBP1.58□□□□□ -2.16
HTL1YCR020W-B ETT1Q08421 412 aaKnown RBP1.58□□□□□ -2.16
HTL1YCR020W-B SUI2P20459 304 aaKnown RBP1.57□□□□□ -2.16
HTL1YCR020W-B PCL1P24867 279 aa1.57□□□□□ -2.16
HTL1YCR020W-B ARO2P28777 376 aaKnown RBP1.57□□□□□ -2.16
HTL1YCR020W-B DBF20P32328 564 aa1.57□□□□□ -2.16
HTL1YCR020W-B UTR4P32626 227 aa1.57□□□□□ -2.16
HTL1YCR020W-B UBP11P36026 717 aa1.57□□□□□ -2.16
HTL1YCR020W-B PIM1P36775 1133 aa1.57□□□□□ -2.16
HTL1YCR020W-B NAT2P37293 288 aa1.57□□□□□ -2.16
HTL1YCR020W-B WWM1P43582 211 aaKnown RBP1.57□□□□□ -2.16
HTL1YCR020W-B BNA1P47096 177 aa1.57□□□□□ -2.16
HTL1YCR020W-B SHY1P53266 389 aa1.57□□□□□ -2.16
HTL1YCR020W-B HAL1Q01766 294 aa1.57□□□□□ -2.16
HTL1YCR020W-B MSC1Q03104 513 aa1.57□□□□□ -2.16
HTL1YCR020W-B VID22Q05934 901 aa1.57□□□□□ -2.16
HTL1YCR020W-B THP3Q12049 470 aaKnown RBP1.57□□□□□ -2.16
HTL1YCR020W-B NCE102Q12207 173 aaRIP-Chip data1.57□□□□□ -2.16not detected
HTL1YCR020W-B PUP3P25451 205 aaKnown RBP1.56□□□□□ -2.16
HTL1YCR020W-B CDC60P26637 1090 aaKnown RBP1.56□□□□□ -2.16
HTL1YCR020W-B NUP133P36161 1157 aa1.56□□□□□ -2.16
HTL1YCR020W-B MAL33P38157 468 aa1.56□□□□□ -2.16
HTL1YCR020W-B AFG3P39925 761 aa1.56□□□□□ -2.16
HTL1YCR020W-B FAR3P46671 204 aa1.56□□□□□ -2.16
HTL1YCR020W-B AAD10P47182 288 aa1.56□□□□□ -2.16
HTL1YCR020W-B DRN1P53255 507 aaKnown RBP1.56□□□□□ -2.16
HTL1YCR020W-B GPI1P53306 609 aa1.56□□□□□ -2.16
HTL1YCR020W-B TOF1P53840 1238 aa1.56□□□□□ -2.16
HTL1YCR020W-B EFM6P53970 246 aa1.56□□□□□ -2.16
HTL1YCR020W-B YMR027WQ04371 470 aa1.56□□□□□ -2.16
HTL1YCR020W-B SNO4Q04902 237 aa1.56□□□□□ -2.16
HTL1YCR020W-B RIX7Q07844 837 aaKnown RBP1.56□□□□□ -2.16
HTL1YCR020W-B HSP33Q08914 237 aaKnown RBP1.56□□□□□ -2.16
HTL1YCR020W-B HSP32Q08992 237 aa1.56□□□□□ -2.16
HTL1YCR020W-B NBP2Q12163 236 aa1.56□□□□□ -2.16
HTL1YCR020W-B HSH49Q99181 213 aaPredicted RBP1.56□□□□□ -2.16
HTL1YCR020W-B SDH3P33421 198 aa1.55□□□□□ -2.16
HTL1YCR020W-B YBR144CP34215 104 aa1.55□□□□□ -2.16
HTL1YCR020W-B FRE2P36033 711 aa1.55□□□□□ -2.16
HTL1YCR020W-B RSM22P36056 628 aa1.55□□□□□ -2.16
HTL1YCR020W-B YHR210CP38893 341 aa1.55□□□□□ -2.16
HTL1YCR020W-B FAU1P40099 211 aa1.55□□□□□ -2.16
HTL1YCR020W-B REE1P40893 198 aa1.55□□□□□ -2.16
HTL1YCR020W-B AVT4P50944 713 aa1.55□□□□□ -2.16
HTL1YCR020W-B YOR365CQ08844 703 aa1.55□□□□□ -2.16
HTL1YCR020W-B YLR108CQ12259 485 aa1.55□□□□□ -2.16
HTL1YCR020W-B WTM1Q12363 437 aaKnown RBP1.55□□□□□ -2.16
HTL1YCR020W-B SSM4P40318 1319 aa1.55□□□□□ -2.16
HTL1YCR020W-B SUC2P00724 532 aa1.54□□□□□ -2.16
HTL1YCR020W-B PET123P17558 318 aa1.54□□□□□ -2.16
HTL1YCR020W-B NDI1P32340 513 aa1.54□□□□□ -2.16
HTL1YCR020W-B SLC1P33333 303 aa1.54□□□□□ -2.16
HTL1YCR020W-B CIN4P39110 191 aa1.54□□□□□ -2.16
HTL1YCR020W-B UBX4P54730 416 aa1.54□□□□□ -2.16
HTL1YCR020W-B HRI1Q05905 244 aaKnown RBP1.54□□□□□ -2.16
HTL1YCR020W-B THP1Q08231 455 aa1.54□□□□□ -2.16
HTL1YCR020W-B YOL087CQ99247 1116 aa1.54□□□□□ -2.16
HTL1YCR020W-B MF(ALPHA)1P01149 165 aa1.53□□□□□ -2.16
HTL1YCR020W-B ARD1P07347 238 aaPredicted RBP1.53□□□□□ -2.16
HTL1YCR020W-B AUR1P36107 401 aaPredicted RBP1.53□□□□□ -2.16
HTL1YCR020W-B BNA4P38169 460 aa1.53□□□□□ -2.16
HTL1YCR020W-B PSY4P38193 441 aa1.53□□□□□ -2.16
HTL1YCR020W-B YER010CP40011 234 aa1.53□□□□□ -2.16
HTL1YCR020W-B TMA108P40462 946 aa1.53□□□□□ -2.16
HTL1YCR020W-B RAD30Q04049 632 aa1.53□□□□□ -2.16
HTL1YCR020W-B BUD22Q04347 519 aaKnown RBP1.53□□□□□ -2.16
HTL1YCR020W-B RBS1Q05672 457 aaKnown RBP1.53□□□□□ -2.16
HTL1YCR020W-B VIP1Q06685 1146 aaKnown RBP1.53□□□□□ -2.16
HTL1YCR020W-B LUC7Q07508 261 aaPredicted RBP1.53□□□□□ -2.16
HTL1YCR020W-B CFT2Q12102 859 aaPredicted RBP1.53□□□□□ -2.16
HTL1YCR020W-B MES1P00958 751 aaKnown RBP1.52□□□□□ -2.17
HTL1YCR020W-B PEP4P07267 405 aaKnown RBP1.52□□□□□ -2.17
HTL1YCR020W-B GLK1P17709 500 aaKnown RBP1.52□□□□□ -2.17
HTL1YCR020W-B PRE8P23639 250 aa1.52□□□□□ -2.17
HTL1YCR020W-B DAL2P25335 343 aa1.52□□□□□ -2.17
HTL1YCR020W-B SSE2P32590 693 aaKnown RBP1.52□□□□□ -2.17
HTL1YCR020W-B GLC7P32598 312 aaKnown RBP1.52□□□□□ -2.17
HTL1YCR020W-B SHP1P34223 423 aa1.52□□□□□ -2.17
HTL1YCR020W-B HCS1P34243 683 aa1.52□□□□□ -2.17
HTL1YCR020W-B DUG2P38149 878 aa1.52□□□□□ -2.17
HTL1YCR020W-B MRP21P38175 177 aa1.52□□□□□ -2.17
HTL1YCR020W-B TIF4631P39935 952 aaKnown RBP1.52□□□□□ -2.17
HTL1YCR020W-B PAN6P40459 309 aa1.52□□□□□ -2.17
HTL1YCR020W-B GCD10P41814 478 aa1.52□□□□□ -2.17
HTL1YCR020W-B NCA3P46955 337 aa1.52□□□□□ -2.17
HTL1YCR020W-B LCL3P53153 274 aa1.52□□□□□ -2.17
HTL1YCR020W-B ZPR1P53303 486 aaKnown RBP1.52□□□□□ -2.17
HTL1YCR020W-B PEX25Q02969 394 aa1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms