RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C ALY1P36117 915 aa6.75□□□□□ -1.33
TDP1YBR223C NTR2P36118 322 aaPredicted RBP6.75□□□□□ -1.33
TDP1YBR223C POA1P38218 177 aa6.75□□□□□ -1.33
TDP1YBR223C STB2P46679 850 aa6.75□□□□□ -1.33
TDP1YBR223C BFA1P47113 574 aa6.75□□□□□ -1.33
TDP1YBR223C CAF120P53836 1060 aa6.75□□□□□ -1.33
TDP1YBR223C RPL34AP87262 121 aaPredicted RBP6.75□□□□□ -1.33
TDP1YBR223C SPR6Q01684 191 aa6.75□□□□□ -1.33
TDP1YBR223C YKR005CQ02203 525 aa6.75□□□□□ -1.33
TDP1YBR223C RSN1Q03516 953 aa6.75□□□□□ -1.33
TDP1YBR223C RTN1Q04947 295 aaKnown RBP6.75□□□□□ -1.33
TDP1YBR223C YLL007CQ07799 665 aa6.75□□□□□ -1.33
TDP1YBR223C YLL032CQ07834 825 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33not detected
TDP1YBR223C RPN8Q08723 338 aaKnown RBP6.75□□□□□ -1.33
TDP1YBR223C BRR1Q99177 341 aaPredicted RBP6.75□□□□□ -1.33
TDP1YBR223C FRT1Q99332 602 aa6.75□□□□□ -1.33
TDP1YBR223C PRC1P00729 532 aa6.74□□□□□ -1.33
TDP1YBR223C TPK3P05986 398 aa6.74□□□□□ -1.33
TDP1YBR223C MRP13P12686 339 aa6.74□□□□□ -1.33
TDP1YBR223C CAD1P24813 409 aaKnown RBP6.74□□□□□ -1.33
TDP1YBR223C VMA6P32366 345 aaKnown RBP6.74□□□□□ -1.33
TDP1YBR223C MAE1P36013 669 aaKnown RBP6.74□□□□□ -1.33
TDP1YBR223C PCF11P39081 626 aaPredicted RBP6.74□□□□□ -1.33
TDP1YBR223C YFL052WP43551 465 aa6.74□□□□□ -1.33
TDP1YBR223C TY4A-JP47023 414 aa6.74□□□□□ -1.33
TDP1YBR223C RPA14P50106 137 aa6.74□□□□□ -1.33
TDP1YBR223C IPI3P53877 555 aa6.74□□□□□ -1.33
TDP1YBR223C IDP3P53982 420 aaKnown RBP6.74□□□□□ -1.33
TDP1YBR223C ORC3P54790 616 aa6.74□□□□□ -1.33
TDP1YBR223C HXT15P54854 567 aa6.74□□□□□ -1.33
TDP1YBR223C CLU1Q03690 1277 aaKnown RBP6.74□□□□□ -1.33
TDP1YBR223C YMR206WQ03695 313 aa6.74□□□□□ -1.33
TDP1YBR223C YPR114WQ06107 315 aa6.74□□□□□ -1.33
TDP1YBR223C PUS7Q08647 676 aaKnown RBP6.74□□□□□ -1.33
TDP1YBR223C YLL054CQ12244 843 aa6.74□□□□□ -1.33
TDP1YBR223C HER1Q12276 1246 aa6.74□□□□□ -1.33
TDP1YBR223C TIM9O74700 87 aa6.73□□□□□ -1.33
TDP1YBR223C REP1P03871 373 aa6.73□□□□□ -1.33
TDP1YBR223C ATP4P05626 244 aa6.73□□□□□ -1.33
TDP1YBR223C GPH1P06738 902 aaKnown RBP6.73□□□□□ -1.33
TDP1YBR223C RSR1P13856 272 aa6.73□□□□□ -1.33
TDP1YBR223C CBS2P14905 389 aa6.73□□□□□ -1.33
TDP1YBR223C MTF1P14908 341 aaKnown RBP6.73□□□□□ -1.33
TDP1YBR223C DAL81P21657 970 aa6.73□□□□□ -1.33
TDP1YBR223C ITR2P30606 609 aa6.73□□□□□ -1.33
TDP1YBR223C LIP5P32875 414 aa6.73□□□□□ -1.33
TDP1YBR223C SDH3P33421 198 aa6.73□□□□□ -1.33
TDP1YBR223C TIP20P33891 701 aa6.73□□□□□ -1.33
TDP1YBR223C EGD2P38879 174 aaKnown RBP6.73□□□□□ -1.33
TDP1YBR223C EMP65P40085 556 aa6.73□□□□□ -1.33
TDP1YBR223C GAB1P41733 394 aa6.73□□□□□ -1.33
TDP1YBR223C FAR7P43592 221 aa6.73□□□□□ -1.33
TDP1YBR223C AIM14P53109 570 aa6.73□□□□□ -1.33
TDP1YBR223C SWP1Q02795 286 aa6.73□□□□□ -1.33
TDP1YBR223C TLG1Q03322 224 aa6.73□□□□□ -1.33
TDP1YBR223C PPN1Q04119 674 aa6.73□□□□□ -1.33
TDP1YBR223C BCH1Q05029 724 aa6.73□□□□□ -1.33
TDP1YBR223C HBT1Q07653 1046 aaKnown RBP6.73□□□□□ -1.33
TDP1YBR223C IRC10Q08118 586 aa6.73□□□□□ -1.33
TDP1YBR223C YPQ1Q12010 308 aa6.73□□□□□ -1.33
TDP1YBR223C MNL2Q12205 849 aa6.73□□□□□ -1.33
TDP1YBR223C YLR046CQ12253 270 aa6.73□□□□□ -1.33
TDP1YBR223C MDM12Q92328 271 aa6.73□□□□□ -1.33
TDP1YBR223C MED11Q99278 115 aa6.73□□□□□ -1.33
TDP1YBR223C MET17P06106 444 aa6.72□□□□□ -1.33
TDP1YBR223C CDC21P06785 304 aa6.72□□□□□ -1.33
TDP1YBR223C ARF2P19146 181 aaKnown RBP6.72□□□□□ -1.33
TDP1YBR223C GEX1P25596 615 aa6.72□□□□□ -1.33
TDP1YBR223C PPZ1P26570 692 aa6.72□□□□□ -1.33
TDP1YBR223C NUP2P32499 720 aa6.72□□□□□ -1.33
TDP1YBR223C ATO2P32907 282 aa6.72□□□□□ -1.33
TDP1YBR223C LRG1P35688 1017 aa6.72□□□□□ -1.33
TDP1YBR223C GEX2P36173 615 aa6.72□□□□□ -1.33
TDP1YBR223C BMT2P38278 337 aa6.72□□□□□ -1.33
TDP1YBR223C YIL161WP40449 235 aaKnown RBP6.72□□□□□ -1.33
TDP1YBR223C YIR016WP40572 265 aa6.72□□□□□ -1.33
TDP1YBR223C SWP82P43554 623 aa6.72□□□□□ -1.33
TDP1YBR223C YGL176CP46945 554 aa6.72□□□□□ -1.33
TDP1YBR223C NNF1P47149 201 aa6.72□□□□□ -1.33
TDP1YBR223C TOM22P49334 152 aa6.72□□□□□ -1.33
TDP1YBR223C FOL2P51601 243 aaKnown RBP6.72□□□□□ -1.33
TDP1YBR223C VAC7P53950 1165 aa6.72□□□□□ -1.33
TDP1YBR223C MET31Q03081 177 aa6.72□□□□□ -1.33
TDP1YBR223C PML39Q03760 334 aa6.72□□□□□ -1.33
TDP1YBR223C RAD34Q06665 692 aa6.72□□□□□ -1.33
TDP1YBR223C YDL114WQ07530 308 aa6.72□□□□□ -1.33
TDP1YBR223C NDD1Q08887 554 aa6.72□□□□□ -1.33
TDP1YBR223C YPL191CQ08930 360 aa6.72□□□□□ -1.33
TDP1YBR223C RPN5Q12250 445 aaKnown RBP6.72□□□□□ -1.33
TDP1YBR223C SNF8Q12483 233 aa6.72□□□□□ -1.33
TDP1YBR223C TY4B-PA0A0B7P3V8 1104 aa6.72□□□□□ -1.33
TDP1YBR223C LEU1P07264 779 aaKnown RBP6.72□□□□□ -1.33
TDP1YBR223C PRP21P32524 280 aaPredicted RBP6.72□□□□□ -1.33
TDP1YBR223C HBS1P32769 611 aaKnown RBP6.72□□□□□ -1.33
TDP1YBR223C GLG1P36143 616 aa6.72□□□□□ -1.33
TDP1YBR223C YCR087C-AP37263 153 aa6.72□□□□□ -1.33
TDP1YBR223C ECM8P38246 354 aa6.72□□□□□ -1.33
TDP1YBR223C ERV46P39727 415 aa6.72□□□□□ -1.33
TDP1YBR223C KRE29P40026 464 aa6.72□□□□□ -1.33
TDP1YBR223C UTP18P40362 594 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms