RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	Q0010	Q9ZZX9	128 aa		4.93	□□□□□ -1.62
SMP1	YBR182C	YMR084W	A2P2R3	262 aa		4.92	□□□□□ -1.62
SMP1	YBR182C	BUD5	P25300	642 aa	Predicted RBP	4.92	□□□□□ -1.62
SMP1	YBR182C	YIM1	P28625	365 aa		4.92	□□□□□ -1.62
SMP1	YBR182C	MCM4	P30665	933 aa	Known RBP	4.92	□□□□□ -1.62
SMP1	YBR182C	MRPL40	P36534	297 aa		4.92	□□□□□ -1.62
SMP1	YBR182C	IMD2	P38697	523 aa	Known RBP	4.92	□□□□□ -1.62
SMP1	YBR182C	DBP8	P38719	431 aa		4.92	□□□□□ -1.62
SMP1	YBR182C	MLH1	P38920	769 aa		4.92	□□□□□ -1.62
SMP1	YBR182C	BPL1	P48445	690 aa	Predicted RBP	4.92	□□□□□ -1.62
SMP1	YBR182C	SHE10	P53075	577 aa		4.92	□□□□□ -1.62
SMP1	YBR182C	YNL143C	P53908	130 aa		4.92	□□□□□ -1.62
SMP1	YBR182C	YMR160W	Q03823	816 aa		4.92	□□□□□ -1.62
SMP1	YBR182C	EMI2	Q04409	500 aa	Known RBP	4.92	□□□□□ -1.62
SMP1	YBR182C	DCS1	Q06151	350 aa		4.92	□□□□□ -1.62
SMP1	YBR182C	ARO10	Q06408	635 aa		4.92	□□□□□ -1.62
SMP1	YBR182C	APL5	Q08951	932 aa	Known RBP	4.92	□□□□□ -1.62
SMP1	YBR182C	AHA1	Q12449	350 aa	Known RBP	4.92	□□□□□ -1.62
SMP1	YBR182C	MTR10	Q99189	972 aa		4.92	□□□□□ -1.62
SMP1	YBR182C	GPH1	P06738	902 aa	Known RBP	4.91	□□□□□ -1.62
SMP1	YBR182C	PPR1	P07272	904 aa	Predicted RBP	4.91	□□□□□ -1.62
SMP1	YBR182C	MRP2	P10663	115 aa	Predicted RBP	4.91	□□□□□ -1.62
SMP1	YBR182C	DBP3	P20447	523 aa	Known RBP	4.91	□□□□□ -1.62
SMP1	YBR182C	UBA1	P22515	1024 aa	Known RBP	4.91	□□□□□ -1.62
SMP1	YBR182C	FAA1	P30624	700 aa	Known RBP	4.91	□□□□□ -1.62
SMP1	YBR182C	CRM1	P30822	1084 aa	Known RBP	4.91	□□□□□ -1.62
SMP1	YBR182C	NDI1	P32340	513 aa		4.91	□□□□□ -1.62
SMP1	YBR182C	VPS17	P32913	551 aa		4.91	□□□□□ -1.62
SMP1	YBR182C	ZTA1	P38230	334 aa	Known RBP	4.91	□□□□□ -1.62
SMP1	YBR182C	CBR1	P38626	284 aa	Known RBP	4.91	□□□□□ -1.62
SMP1	YBR182C	FAD1	P38913	306 aa		4.91	□□□□□ -1.62
SMP1	YBR182C	NDC80	P40460	691 aa		4.91	□□□□□ -1.62
SMP1	YBR182C	RPA34	P47006	233 aa	Predicted RBP	4.91	□□□□□ -1.62
SMP1	YBR182C	ECM27	P47144	725 aa		4.91	□□□□□ -1.62
SMP1	YBR182C	COP1	P53622	1201 aa	Known RBP	4.91	□□□□□ -1.62
SMP1	YBR182C	TIM11	P81449	96 aa	Predicted RBP	4.91	□□□□□ -1.62
SMP1	YBR182C	YMR178W	Q03219	274 aa	Known RBP	4.91	□□□□□ -1.62
SMP1	YBR182C	RTT109	Q07794	436 aa		4.91	□□□□□ -1.62
SMP1	YBR182C	MRH1	Q12117	320 aa	Predicted RBP	4.91	□□□□□ -1.62
SMP1	YBR182C	SGT2	Q12118	346 aa	Known RBP	4.91	□□□□□ -1.62
SMP1	YBR182C	VAM3	Q12241	283 aa		4.91	□□□□□ -1.62
SMP1	YBR182C	MDM20	Q12387	796 aa	Known RBP	4.91	□□□□□ -1.62
SMP1	YBR182C	RHO2	P06781	192 aa		4.91	□□□□□ -1.62
SMP1	YBR182C	PRP2	P20095	876 aa	Predicted RBP	4.91	□□□□□ -1.62
SMP1	YBR182C	IME2	P32581	645 aa		4.91	□□□□□ -1.62
SMP1	YBR182C	GLG1	P36143	616 aa		4.91	□□□□□ -1.62
SMP1	YBR182C	VHS2	P40463	436 aa		4.91	□□□□□ -1.62
SMP1	YBR182C	OPT1	P40897	799 aa		4.91	□□□□□ -1.62
SMP1	YBR182C	SEC27	P41811	889 aa	Known RBP	4.91	□□□□□ -1.62
SMP1	YBR182C	TOM22	P49334	152 aa		4.91	□□□□□ -1.62
SMP1	YBR182C	RMD9	P53140	646 aa	Known RBP	4.91	□□□□□ -1.62
SMP1	YBR182C	PRM1	P53835	661 aa		4.91	□□□□□ -1.62
SMP1	YBR182C	ALF1	P53904	254 aa		4.91	□□□□□ -1.62
SMP1	YBR182C	EGD1	Q02642	157 aa	Known RBP	4.91	□□□□□ -1.62
SMP1	YBR182C	COQ9	Q05779	260 aa		4.91	□□□□□ -1.62
SMP1	YBR182C	ECM30	Q06673	1274 aa		4.91	□□□□□ -1.62
SMP1	YBR182C	CAR1	P00812	333 aa	Known RBP	4.9	□□□□□ -1.63
SMP1	YBR182C	ARO3	P14843	370 aa	Known RBP	4.9	□□□□□ -1.63
SMP1	YBR182C	ELO2	P25358	347 aa		4.9	□□□□□ -1.63
SMP1	YBR182C	HIR2	P32480	875 aa		4.9	□□□□□ -1.63
SMP1	YBR182C	YPT53	P36019	220 aa		4.9	□□□□□ -1.63
SMP1	YBR182C	PPS1	P38148	807 aa		4.9	□□□□□ -1.63
SMP1	YBR182C	SPT8	P38915	602 aa		4.9	□□□□□ -1.63
SMP1	YBR182C	VPS41	P38959	992 aa		4.9	□□□□□ -1.63
SMP1	YBR182C	ATG27	P46989	271 aa		4.9	□□□□□ -1.63
SMP1	YBR182C	EFM3	P47163	339 aa		4.9	□□□□□ -1.63
SMP1	YBR182C	YGL108C	P53139	140 aa		4.9	□□□□□ -1.63
SMP1	YBR182C	SMX3	P54999	86 aa	Predicted RBP	4.9	□□□□□ -1.63
SMP1	YBR182C	RRB1	Q04225	511 aa	Known RBP	4.9	□□□□□ -1.63
SMP1	YBR182C	HRD3	Q05787	833 aa		4.9	□□□□□ -1.63
SMP1	YBR182C	DIS3	Q08162	1001 aa	Known RBP	4.9	□□□□□ -1.63
SMP1	YBR182C	CBP1	P07252	654 aa		4.89	□□□□□ -1.63
SMP1	YBR182C	GAL7	P08431	366 aa		4.89	□□□□□ -1.63
SMP1	YBR182C	RAP1	P11938	827 aa		4.89	□□□□□ -1.63
SMP1	YBR182C	OAR1	P35731	278 aa		4.89	□□□□□ -1.63
SMP1	YBR182C	MBB1	P39534	108 aa		4.89	□□□□□ -1.63
SMP1	YBR182C	ELP2	P42935	788 aa		4.89	□□□□□ -1.63
SMP1	YBR182C	AIP1	P46680	615 aa	Known RBP	4.89	□□□□□ -1.63
SMP1	YBR182C	RPN14	P53196	417 aa		4.89	□□□□□ -1.63
SMP1	YBR182C	YGR126W	P53274	230 aa		4.89	□□□□□ -1.63
SMP1	YBR182C	CPR8	P53728	308 aa		4.89	□□□□□ -1.63
SMP1	YBR182C	RRN5	Q02983	363 aa		4.89	□□□□□ -1.63
SMP1	YBR182C	MSC1	Q03104	513 aa		4.89	□□□□□ -1.63
SMP1	YBR182C	MRPL1	Q04599	285 aa		4.89	□□□□□ -1.63
SMP1	YBR182C	RNH1	Q04740	348 aa		4.89	□□□□□ -1.63
SMP1	YBR182C	CYK3	Q07533	885 aa		4.89	□□□□□ -1.63
SMP1	YBR182C	YOL159C	Q08300	171 aa		4.89	□□□□□ -1.63
SMP1	YBR182C	PCL8	Q08966	492 aa		4.89	□□□□□ -1.63
SMP1	YBR182C	YLR049C	Q12110	428 aa		4.89	□□□□□ -1.63
SMP1	YBR182C	BRR1	Q99177	341 aa	Predicted RBP	4.89	□□□□□ -1.63
SMP1	YBR182C	ILV5	P06168	395 aa	Known RBP	4.88	□□□□□ -1.63
SMP1	YBR182C	GCD2	P12754	651 aa	Predicted RBP	4.88	□□□□□ -1.63
SMP1	YBR182C	PMR1	P13586	950 aa		4.88	□□□□□ -1.63
SMP1	YBR182C	PUT4	P15380	627 aa		4.88	□□□□□ -1.63
SMP1	YBR182C	RIM1	P32445	135 aa	Known RBP	4.88	□□□□□ -1.63
SMP1	YBR182C	VHC1	P38329	1120 aa		4.88	□□□□□ -1.63
SMP1	YBR182C	SUL1	P38359	859 aa		4.88	□□□□□ -1.63
SMP1	YBR182C	PCL5	P38794	229 aa		4.88	□□□□□ -1.63
SMP1	YBR182C	SMC2	P38989	1170 aa	Known RBP	4.88	□□□□□ -1.63
SMP1	YBR182C	RSM23	Q01163	450 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms