RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C YIM1P28625 365 aa2.58□□□□□ -2
RPB5YBR154C SPR1P32603 445 aa2.58□□□□□ -2
RPB5YBR154C UTR4P32626 227 aa2.58□□□□□ -2
RPB5YBR154C YHR210CP38893 341 aa2.58□□□□□ -2
RPB5YBR154C CIN4P39110 191 aa2.58□□□□□ -2
RPB5YBR154C YER010CP40011 234 aa2.58□□□□□ -2
RPB5YBR154C BNA1P47096 177 aa2.58□□□□□ -2
RPB5YBR154C ARK1P53974 638 aa2.58□□□□□ -2
RPB5YBR154C RIX7Q07844 837 aaKnown RBP2.58□□□□□ -2
RPB5YBR154C ERV2Q12284 196 aa2.58□□□□□ -2
RPB5YBR154C SOD1P00445 154 aaKnown RBP2.57□□□□□ -2
RPB5YBR154C ISY1P21374 235 aaPredicted RBP2.57□□□□□ -2
RPB5YBR154C DPB3P27344 201 aa2.57□□□□□ -2
RPB5YBR154C SYN8P31377 255 aa2.57□□□□□ -2
RPB5YBR154C SLC1P33333 303 aa2.57□□□□□ -2
RPB5YBR154C FUI1P38196 639 aa2.57□□□□□ -2
RPB5YBR154C RFS1P38234 210 aaKnown RBP2.57□□□□□ -2
RPB5YBR154C KAP123P40069 1113 aaKnown RBP2.57□□□□□ -2
RPB5YBR154C CAF40P53829 373 aa2.57□□□□□ -2
RPB5YBR154C YLR152CP54072 576 aa2.57□□□□□ -2
RPB5YBR154C VPS72Q03388 795 aa2.57□□□□□ -2
RPB5YBR154C ATG16Q03818 150 aa2.57□□□□□ -2
RPB5YBR154C YDL057WQ07379 328 aa2.57□□□□□ -2
RPB5YBR154C HEM15P16622 393 aa2.56□□□□□ -2
RPB5YBR154C TRX2P22803 104 aaKnown RBP2.56□□□□□ -2
RPB5YBR154C NAB3P38996 802 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
RPB5YBR154C IES5P40060 125 aa2.56□□□□□ -2
RPB5YBR154C GWT1P47026 490 aa2.56□□□□□ -2
RPB5YBR154C YGR021WP53212 290 aa2.56□□□□□ -2
RPB5YBR154C BUD21Q08492 214 aaPredicted RBP2.56□□□□□ -2
RPB5YBR154C ESA1Q08649 445 aa2.56□□□□□ -2
RPB5YBR154C YOR365CQ08844 703 aa2.56□□□□□ -2
RPB5YBR154C YOL087CQ99247 1116 aa2.56□□□□□ -2
RPB5YBR154C MF(ALPHA)1P01149 165 aa2.55□□□□□ -2
RPB5YBR154C HIP1P06775 603 aa2.55□□□□□ -2
RPB5YBR154C YIL067CP40514 678 aa2.55□□□□□ -2
RPB5YBR154C TIS11P47977 285 aa2.55□□□□□ -2
RPB5YBR154C APT1P49435 187 aaKnown RBP2.55□□□□□ -2
RPB5YBR154C GPI1P53306 609 aa2.55□□□□□ -2
RPB5YBR154C APJ1P53940 528 aa2.55□□□□□ -2
RPB5YBR154C MSC1Q03104 513 aa2.55□□□□□ -2
RPB5YBR154C BUD22Q04347 519 aaKnown RBP2.55□□□□□ -2
RPB5YBR154C SNO4Q04902 237 aa2.55□□□□□ -2
RPB5YBR154C HSP33Q08914 237 aaKnown RBP2.55□□□□□ -2
RPB5YBR154C HSP32Q08992 237 aa2.55□□□□□ -2
RPB5YBR154C TMS1Q12116 473 aa2.55□□□□□ -2
RPB5YBR154C NCE102Q12207 173 aaRIP-Chip data2.55□□□□□ -2not detected
RPB5YBR154C HRT3Q12347 344 aa2.55□□□□□ -2
RPB5YBR154C RAD52P06778 471 aaKnown RBP2.54□□□□□ -2
RPB5YBR154C KGD1P20967 1014 aaKnown RBP2.54□□□□□ -2
RPB5YBR154C SSE2P32590 693 aaKnown RBP2.54□□□□□ -2
RPB5YBR154C SDH3P33421 198 aa2.54□□□□□ -2
RPB5YBR154C YBR144CP34215 104 aa2.54□□□□□ -2
RPB5YBR154C MAL33P38157 468 aa2.54□□□□□ -2
RPB5YBR154C ARC1P46672 376 aaKnown RBP2.54□□□□□ -2
RPB5YBR154C GTR1Q00582 310 aa2.54□□□□□ -2
RPB5YBR154C PIR3Q03180 325 aa2.54□□□□□ -2
RPB5YBR154C PHO92Q06390 306 aa2.54□□□□□ -2
RPB5YBR154C SUC2P00724 532 aa2.53□□□□□ -2
RPB5YBR154C ARD1P07347 238 aaPredicted RBP2.53□□□□□ -2
RPB5YBR154C MRS6P32864 603 aaKnown RBP2.53□□□□□ -2
RPB5YBR154C AUR1P36107 401 aaPredicted RBP2.53□□□□□ -2
RPB5YBR154C AFG3P39925 761 aa2.53□□□□□ -2
RPB5YBR154C REE1P40893 198 aa2.53□□□□□ -2
RPB5YBR154C ALK1P43633 760 aaKnown RBP2.53□□□□□ -2
RPB5YBR154C YDL121CQ07541 149 aa2.53□□□□□ -2
RPB5YBR154C HSH49Q99181 213 aaPredicted RBP2.53□□□□□ -2
RPB5YBR154C CDC24P11433 854 aaPredicted RBP2.52□□□□□ -2.01
RPB5YBR154C CLN3P13365 580 aa2.52□□□□□ -2.01
RPB5YBR154C RVS161P25343 265 aaKnown RBP2.52□□□□□ -2.01
RPB5YBR154C YIH1P25637 258 aa2.52□□□□□ -2.01
RPB5YBR154C CRM1P30822 1084 aaKnown RBP2.52□□□□□ -2.01
RPB5YBR154C SHP1P34223 423 aa2.52□□□□□ -2.01
RPB5YBR154C RSM22P36056 628 aa2.52□□□□□ -2.01
RPB5YBR154C SWD3P38123 315 aa2.52□□□□□ -2.01
RPB5YBR154C LYS4P49367 693 aaPredicted RBP2.52□□□□□ -2.01
RPB5YBR154C YMR027WQ04371 470 aa2.52□□□□□ -2.01
RPB5YBR154C RBS1Q05672 457 aaKnown RBP2.52□□□□□ -2.01
RPB5YBR154C LUC7Q07508 261 aaPredicted RBP2.52□□□□□ -2.01
RPB5YBR154C FMP40Q08968 688 aaPredicted RBP2.52□□□□□ -2.01
RPB5YBR154C CPR4P25334 318 aa2.51□□□□□ -2.01
RPB5YBR154C NAT2P37293 288 aa2.51□□□□□ -2.01
RPB5YBR154C SIP4P46954 829 aa2.51□□□□□ -2.01
RPB5YBR154C DRN1P53255 507 aaKnown RBP2.51□□□□□ -2.01
RPB5YBR154C SHY1P53266 389 aa2.51□□□□□ -2.01
RPB5YBR154C BSC5P53755 489 aa2.51□□□□□ -2.01
RPB5YBR154C IBD2P53892 351 aa2.51□□□□□ -2.01
RPB5YBR154C RAD30Q04049 632 aa2.51□□□□□ -2.01
RPB5YBR154C THP1Q08231 455 aa2.51□□□□□ -2.01
RPB5YBR154C YLR108CQ12259 485 aa2.51□□□□□ -2.01
RPB5YBR154C SKM1Q12469 655 aa2.51□□□□□ -2.01
RPB5YBR154C PEP4P07267 405 aaKnown RBP2.5□□□□□ -2.01
RPB5YBR154C NDI1P32340 513 aa2.5□□□□□ -2.01
RPB5YBR154C UBP11P36026 717 aa2.5□□□□□ -2.01
RPB5YBR154C DUG2P38149 878 aa2.5□□□□□ -2.01
RPB5YBR154C BNA4P38169 460 aa2.5□□□□□ -2.01
RPB5YBR154C AXL2P38928 823 aa2.5□□□□□ -2.01
RPB5YBR154C CBK1P53894 756 aa2.5□□□□□ -2.01
RPB5YBR154C TOF2Q02208 771 aa2.5□□□□□ -2.01
RPB5YBR154C SVL3Q03088 825 aaKnown RBP2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms