RNA–Protein interactions for RNA: YBR058C-A

TSC3, Transcript of Protein that stimulates the activity of serine palmitoyltransferase, yeastyeast

Gene TSC3, Length 243 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSC3YBR058C-A YDL057WQ07379 328 aa2.38□□□□□ -2.03
TSC3YBR058C-A FMP40Q08968 688 aaPredicted RBP2.38□□□□□ -2.03
TSC3YBR058C-A NOP1P15646 327 aaKnown RBP2.37□□□□□ -2.03
TSC3YBR058C-A SWH1P35845 1188 aa2.37□□□□□ -2.03
TSC3YBR058C-A UBP11P36026 717 aa2.37□□□□□ -2.03
TSC3YBR058C-A MUD2P36084 527 aaKnown RBP2.37□□□□□ -2.03
TSC3YBR058C-A TUL1P36096 758 aa2.37□□□□□ -2.03
TSC3YBR058C-A TIF4631P39935 952 aaKnown RBP2.37□□□□□ -2.03
TSC3YBR058C-A HAT2P39984 401 aa2.37□□□□□ -2.03
TSC3YBR058C-A SHO1P40073 367 aa2.37□□□□□ -2.03
TSC3YBR058C-A DUO1P53168 247 aaKnown RBP2.37□□□□□ -2.03
TSC3YBR058C-A IVY1Q04934 453 aa2.37□□□□□ -2.03
TSC3YBR058C-A MRPL51Q06090 140 aaPredicted RBP2.37□□□□□ -2.03
TSC3YBR058C-A NOP58Q12499 511 aaKnown RBP2.37□□□□□ -2.03
TSC3YBR058C-A HSH49Q99181 213 aaPredicted RBP2.37□□□□□ -2.03
TSC3YBR058C-A PMR1P13586 950 aa2.36□□□□□ -2.03
TSC3YBR058C-A ART10P18634 518 aaKnown RBP2.36□□□□□ -2.03
TSC3YBR058C-A MCM10P32354 571 aa2.36□□□□□ -2.03
TSC3YBR058C-A PAH1P32567 862 aa2.36□□□□□ -2.03
TSC3YBR058C-A UTR4P32626 227 aa2.36□□□□□ -2.03
TSC3YBR058C-A MSN2P33748 704 aa2.36□□□□□ -2.03
TSC3YBR058C-A RFS1P38234 210 aaKnown RBP2.36□□□□□ -2.03
TSC3YBR058C-A YEL068CP39977 110 aa2.36□□□□□ -2.03
TSC3YBR058C-A ALG8P40351 577 aa2.36□□□□□ -2.03
TSC3YBR058C-A MSO1P53604 210 aaKnown RBP2.36□□□□□ -2.03
TSC3YBR058C-A WSC2P53832 503 aa2.36□□□□□ -2.03
TSC3YBR058C-A PHO92Q06390 306 aa2.36□□□□□ -2.03
TSC3YBR058C-A CFT2Q12102 859 aaPredicted RBP2.36□□□□□ -2.03
TSC3YBR058C-A LSP1Q12230 341 aaKnown RBP2.36□□□□□ -2.03
TSC3YBR058C-A CTF3Q12748 733 aa2.36□□□□□ -2.03
TSC3YBR058C-A YBR126W-AQ8TGU7 68 aa2.36□□□□□ -2.03
TSC3YBR058C-A SSH4P32343 579 aa2.35□□□□□ -2.03
TSC3YBR058C-A YBL029WP38201 376 aa2.35□□□□□ -2.03
TSC3YBR058C-A FLC2P39719 783 aa2.35□□□□□ -2.03
TSC3YBR058C-A NPR2P39923 615 aa2.35□□□□□ -2.03
TSC3YBR058C-A ARK1P53974 638 aa2.35□□□□□ -2.03
TSC3YBR058C-A YMR018WQ04364 514 aa2.35□□□□□ -2.03
TSC3YBR058C-A HNT3Q08702 217 aa2.35□□□□□ -2.03
TSC3YBR058C-A KEL3Q08979 651 aaPredicted RBP2.35□□□□□ -2.03
TSC3YBR058C-A NMD4Q12129 218 aa2.35□□□□□ -2.03
TSC3YBR058C-A YER078W-AQ3E7A2 54 aa2.35□□□□□ -2.03
TSC3YBR058C-A YPT6Q99260 215 aa2.35□□□□□ -2.03
TSC3YBR058C-A DUG2P38149 878 aa2.34□□□□□ -2.03
TSC3YBR058C-A TCM62P38228 572 aaKnown RBP2.34□□□□□ -2.03
TSC3YBR058C-A MUM2P38236 366 aa2.34□□□□□ -2.03
TSC3YBR058C-A AFG3P39925 761 aa2.34□□□□□ -2.03
TSC3YBR058C-A MKT1P40850 830 aaKnown RBP2.34□□□□□ -2.03
TSC3YBR058C-A ALK1P43633 760 aaKnown RBP2.34□□□□□ -2.03
TSC3YBR058C-A GWT1P47026 490 aa2.34□□□□□ -2.03
TSC3YBR058C-A IMD4P50094 524 aaKnown RBP2.34□□□□□ -2.03
TSC3YBR058C-A IPI3P53877 555 aa2.34□□□□□ -2.03
TSC3YBR058C-A IRC15Q02733 499 aa2.34□□□□□ -2.03
TSC3YBR058C-A RBS1Q05672 457 aaKnown RBP2.34□□□□□ -2.03
TSC3YBR058C-A YEH1Q07804 573 aa2.34□□□□□ -2.03
TSC3YBR058C-A THP1Q08231 455 aa2.34□□□□□ -2.03
TSC3YBR058C-A RKM5Q12367 367 aa2.34□□□□□ -2.03
TSC3YBR058C-A SEM1O94742 89 aa2.33□□□□□ -2.04
TSC3YBR058C-A EST1P17214 699 aaPredicted RBP2.33□□□□□ -2.04
TSC3YBR058C-A ATP11P32453 318 aa2.33□□□□□ -2.04
TSC3YBR058C-A SHP1P34223 423 aa2.33□□□□□ -2.04
TSC3YBR058C-A SEF1P34228 1148 aa2.33□□□□□ -2.04
TSC3YBR058C-A MRPL4P36517 319 aa2.33□□□□□ -2.04
TSC3YBR058C-A BNA4P38169 460 aa2.33□□□□□ -2.04
TSC3YBR058C-A DED81P38707 554 aaKnown RBP2.33□□□□□ -2.04
TSC3YBR058C-A KEL1P38853 1164 aaKnown RBP2.33□□□□□ -2.04
TSC3YBR058C-A FAU1P40099 211 aa2.33□□□□□ -2.04
TSC3YBR058C-A SGN1P40561 250 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
TSC3YBR058C-A GCD10P41814 478 aa2.33□□□□□ -2.04
TSC3YBR058C-A UPF3P48412 387 aaKnown RBP2.33□□□□□ -2.04
TSC3YBR058C-A SHE10P53075 577 aa2.33□□□□□ -2.04
TSC3YBR058C-A GPI1P53306 609 aa2.33□□□□□ -2.04
TSC3YBR058C-A HEF3P53978 1044 aaKnown RBP2.33□□□□□ -2.04
TSC3YBR058C-A TOF2Q02208 771 aa2.33□□□□□ -2.04
TSC3YBR058C-A VPS74Q06385 345 aa2.33□□□□□ -2.04
TSC3YBR058C-A RLM1Q12224 676 aa2.33□□□□□ -2.04
TSC3YBR058C-A AAC3P18238 307 aa2.32□□□□□ -2.04
TSC3YBR058C-A PRD1P25375 712 aa2.32□□□□□ -2.04
TSC3YBR058C-A LDB16P25587 256 aa2.32□□□□□ -2.04
TSC3YBR058C-A DPB3P27344 201 aa2.32□□□□□ -2.04
TSC3YBR058C-A TCD2P36101 447 aaKnown RBP2.32□□□□□ -2.04
TSC3YBR058C-A YBP1P38315 674 aa2.32□□□□□ -2.04
TSC3YBR058C-A ALG5P40350 334 aa2.32□□□□□ -2.04
TSC3YBR058C-A MRX6P48564 524 aa2.32□□□□□ -2.04
TSC3YBR058C-A VID30P53076 958 aa2.32□□□□□ -2.04
TSC3YBR058C-A MES1P00958 751 aaKnown RBP2.31□□□□□ -2.04
TSC3YBR058C-A LPD1P09624 499 aaKnown RBP2.31□□□□□ -2.04
TSC3YBR058C-A GLK1P17709 500 aaKnown RBP2.31□□□□□ -2.04
TSC3YBR058C-A EXO70P19658 623 aa2.31□□□□□ -2.04
TSC3YBR058C-A PRP2P20095 876 aaPredicted RBP2.31□□□□□ -2.04
TSC3YBR058C-A FUN19P28003 413 aaPredicted RBP2.31□□□□□ -2.04
TSC3YBR058C-A MSR1P38714 643 aa2.31□□□□□ -2.04
TSC3YBR058C-A RRT5P43607 289 aa2.31□□□□□ -2.04
TSC3YBR058C-A YGL242CP53066 181 aa2.31□□□□□ -2.04
TSC3YBR058C-A SLG1P54867 378 aa2.31□□□□□ -2.04
TSC3YBR058C-A SVL3Q03088 825 aaKnown RBP2.31□□□□□ -2.04
TSC3YBR058C-A YDR056CQ12025 205 aa2.31□□□□□ -2.04
TSC3YBR058C-A HUA2Q12134 243 aa2.31□□□□□ -2.04
TSC3YBR058C-A ERV2Q12284 196 aa2.31□□□□□ -2.04
TSC3YBR058C-A RRP12Q12754 1228 aaKnown RBP2.31□□□□□ -2.04
TSC3YBR058C-A YJR112W-AQ3E743 109 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms