RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C TEN1Q07921 160 aa6.62□□□□□ -1.35
LDB7YBL006C NUR1Q12066 484 aa6.62□□□□□ -1.35
LDB7YBL006C SLP1Q12232 587 aa6.62□□□□□ -1.35
LDB7YBL006C MDY2Q12285 212 aa6.62□□□□□ -1.35
LDB7YBL006C CDC8P00572 216 aa6.61□□□□□ -1.35
LDB7YBL006C PET111P08468 800 aa6.61□□□□□ -1.35
LDB7YBL006C RPB4P20433 221 aaPredicted RBP6.61□□□□□ -1.35
LDB7YBL006C SDH3P33421 198 aa6.61□□□□□ -1.35
LDB7YBL006C RRN10P38204 145 aa6.61□□□□□ -1.35
LDB7YBL006C CCT2P39076 527 aaKnown RBP6.61□□□□□ -1.35
LDB7YBL006C SSP120P39931 234 aaKnown RBP6.61□□□□□ -1.35
LDB7YBL006C JHD2P47156 728 aaPredicted RBP6.61□□□□□ -1.35
LDB7YBL006C ZIP2P53061 704 aa6.61□□□□□ -1.35
LDB7YBL006C KXD1P53158 218 aa6.61□□□□□ -1.35
LDB7YBL006C SHY1P53266 389 aa6.61□□□□□ -1.35
LDB7YBL006C YGR250CP53316 781 aaKnown RBP6.61□□□□□ -1.35
LDB7YBL006C YMR209CQ03648 457 aa6.61□□□□□ -1.35
LDB7YBL006C MCA1Q08601 432 aa6.61□□□□□ -1.35
LDB7YBL006C RGT2Q12300 763 aa6.61□□□□□ -1.35
LDB7YBL006C NOP14Q99207 810 aaKnown RBP6.61□□□□□ -1.35
LDB7YBL006C IPP1P00817 287 aaKnown RBP6.6□□□□□ -1.35
LDB7YBL006C ADH4P10127 382 aa6.6□□□□□ -1.35
LDB7YBL006C PRP6P19735 899 aaPredicted RBP6.6□□□□□ -1.35
LDB7YBL006C BAS1P22035 811 aa6.6□□□□□ -1.35
LDB7YBL006C HXT4P32467 576 aa6.6□□□□□ -1.35
LDB7YBL006C NIP1P32497 812 aaKnown RBP6.6□□□□□ -1.35
LDB7YBL006C KKQ8P36004 724 aa6.6□□□□□ -1.35
LDB7YBL006C VRP1P37370 817 aa6.6□□□□□ -1.35
LDB7YBL006C HXT6P39003 570 aaKnown RBP6.6□□□□□ -1.35
LDB7YBL006C HXT7P39004 570 aa6.6□□□□□ -1.35
LDB7YBL006C MET30P39014 640 aa6.6□□□□□ -1.35
LDB7YBL006C MNT3P40549 630 aa6.6□□□□□ -1.35
LDB7YBL006C AZF1P41696 914 aa6.6□□□□□ -1.35
LDB7YBL006C PAN2P53010 1115 aaPredicted RBP6.6□□□□□ -1.35
LDB7YBL006C RNY1Q02933 434 aaKnown RBP6.6□□□□□ -1.35
LDB7YBL006C HPT1Q04178 221 aaKnown RBP6.6□□□□□ -1.35
LDB7YBL006C RRB1Q04225 511 aaKnown RBP6.6□□□□□ -1.35
LDB7YBL006C YPR011CQ12251 326 aa6.6□□□□□ -1.35
LDB7YBL006C PNS1Q12412 539 aa6.6□□□□□ -1.35
LDB7YBL006C YPL247CQ12523 523 aa6.6□□□□□ -1.35
LDB7YBL006C SRN2Q99176 213 aa6.6□□□□□ -1.35
LDB7YBL006C RGS2Q99188 309 aa6.6□□□□□ -1.35
LDB7YBL006C SLH1P53327 1967 aaKnown RBP6.59□□□□□ -1.35
LDB7YBL006C HTA1P04911 132 aaKnown RBP6.59□□□□□ -1.35
LDB7YBL006C HTA2P04912 132 aa6.59□□□□□ -1.35
LDB7YBL006C RPS21AP0C0V8 87 aaKnown RBP6.59□□□□□ -1.35
LDB7YBL006C SSC1P0CS90 654 aaKnown RBP6.59□□□□□ -1.35
LDB7YBL006C HOM3P10869 527 aa6.59□□□□□ -1.35
LDB7YBL006C PRI2P20457 528 aa6.59□□□□□ -1.35
LDB7YBL006C CRM1P30822 1084 aaKnown RBP6.59□□□□□ -1.35
LDB7YBL006C YME1P32795 747 aa6.59□□□□□ -1.35
LDB7YBL006C UGP1P32861 499 aaKnown RBP6.59□□□□□ -1.35
LDB7YBL006C RRP14P36080 434 aaKnown RBP6.59□□□□□ -1.35
LDB7YBL006C SPP381P38282 291 aaPredicted RBP6.59□□□□□ -1.35
LDB7YBL006C YHR112CP38716 378 aa6.59□□□□□ -1.35
LDB7YBL006C YGL260WP53056 76 aa6.59□□□□□ -1.35
LDB7YBL006C YGR012WP53206 393 aa6.59□□□□□ -1.35
LDB7YBL006C LSC1P53598 329 aaKnown RBP6.59□□□□□ -1.35
LDB7YBL006C BIO4P53630 237 aa6.59□□□□□ -1.35
LDB7YBL006C YNR021WP53723 404 aaKnown RBP6.59□□□□□ -1.35
LDB7YBL006C CHS5Q12114 671 aaKnown RBP6.59□□□□□ -1.35
LDB7YBL006C YPL245WQ12179 454 aaKnown RBP6.59□□□□□ -1.35
LDB7YBL006C COX1P00401 534 aa6.58□□□□□ -1.36
LDB7YBL006C AI3P03877 415 aa6.58□□□□□ -1.36
LDB7YBL006C ILV2P07342 687 aaKnown RBP6.58□□□□□ -1.36
LDB7YBL006C MRPL25P23369 157 aa6.58□□□□□ -1.36
LDB7YBL006C MCM5P29496 775 aaKnown RBP6.58□□□□□ -1.36
LDB7YBL006C KAP122P32767 1081 aa6.58□□□□□ -1.36
LDB7YBL006C ASK1P35734 292 aa6.58□□□□□ -1.36
LDB7YBL006C YER034WP40022 185 aaKnown RBP6.58□□□□□ -1.36
LDB7YBL006C SMX2P40204 77 aaKnown RBP6.58□□□□□ -1.36
LDB7YBL006C YIL152WP40455 235 aa6.58□□□□□ -1.36
LDB7YBL006C SEC27P41811 889 aaKnown RBP6.58□□□□□ -1.36
LDB7YBL006C YRB1P41920 201 aaKnown RBP6.58□□□□□ -1.36
LDB7YBL006C YJR039WP47107 1121 aa6.58□□□□□ -1.36
LDB7YBL006C YNL260CP53846 198 aa6.58□□□□□ -1.36
LDB7YBL006C ERG13P54839 491 aaKnown RBP6.58□□□□□ -1.36
LDB7YBL006C TAF11Q04226 346 aa6.58□□□□□ -1.36
LDB7YBL006C RIF2Q06208 395 aa6.58□□□□□ -1.36
LDB7YBL006C RAD34Q06665 692 aa6.58□□□□□ -1.36
LDB7YBL006C FRA1Q07825 749 aa6.58□□□□□ -1.36
LDB7YBL006C YPL272CQ08984 517 aa6.58□□□□□ -1.36
LDB7YBL006C TMS1Q12116 473 aa6.58□□□□□ -1.36
LDB7YBL006C BRR1Q99177 341 aaPredicted RBP6.58□□□□□ -1.36
LDB7YBL006C RPL43AP0CX25 92 aaKnown RBP6.57□□□□□ -1.36
LDB7YBL006C RPL43BP0CX26 92 aa6.57□□□□□ -1.36
LDB7YBL006C GUK1P15454 187 aaKnown RBP6.57□□□□□ -1.36
LDB7YBL006C SEC62P21825 274 aa6.57□□□□□ -1.36
LDB7YBL006C MXR2P25566 168 aa6.57□□□□□ -1.36
LDB7YBL006C YCR090CP25654 182 aaKnown RBP6.57□□□□□ -1.36
LDB7YBL006C PHA2P32452 334 aa6.57□□□□□ -1.36
LDB7YBL006C MKK2P32491 506 aa6.57□□□□□ -1.36
LDB7YBL006C RMA1P36001 430 aaKnown RBP6.57□□□□□ -1.36
LDB7YBL006C CAB3P36076 571 aa6.57□□□□□ -1.36
LDB7YBL006C SPC97P38863 823 aa6.57□□□□□ -1.36
LDB7YBL006C MGS1P40151 587 aa6.57□□□□□ -1.36
LDB7YBL006C PEP8P40335 379 aa6.57□□□□□ -1.36
LDB7YBL006C APQ12P40532 138 aa6.57□□□□□ -1.36
LDB7YBL006C UBX6P47049 396 aa6.57□□□□□ -1.36
LDB7YBL006C HOC1P47124 396 aa6.57□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 48.5 ms