RNA–Protein interactions for RNA: YAL011W

SWC3, Transcript of Protein of unknown function, yeast

Gene SWC3, Length 1,878 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWC3	YAL011W	IZH4	Q99393	312 aa		4.56	□□□□□ -1.68
SWC3	YAL011W	YPK1	P12688	680 aa	Known RBP	4.56	□□□□□ -1.68
SWC3	YAL011W	SNA3	P14359	133 aa		4.56	□□□□□ -1.68
SWC3	YAL011W	KSS1	P14681	368 aa		4.56	□□□□□ -1.68
SWC3	YAL011W	CAD1	P24813	409 aa	Known RBP	4.56	□□□□□ -1.68
SWC3	YAL011W	SPS22	P25380	463 aa		4.56	□□□□□ -1.68
SWC3	YAL011W	KRE6	P32486	720 aa		4.56	□□□□□ -1.68
SWC3	YAL011W	KES1	P35844	434 aa	Known RBP	4.56	□□□□□ -1.68
SWC3	YAL011W	TSL1	P38427	1098 aa	Known RBP	4.56	□□□□□ -1.68
SWC3	YAL011W	RFC3	P38629	340 aa		4.56	□□□□□ -1.68
SWC3	YAL011W	YJL206C	P39529	758 aa		4.56	□□□□□ -1.68
SWC3	YAL011W	GIP4	P39732	760 aa		4.56	□□□□□ -1.68
SWC3	YAL011W	INP51	P40559	946 aa	Known RBP	4.56	□□□□□ -1.68
SWC3	YAL011W	MAD2	P40958	196 aa		4.56	□□□□□ -1.68
SWC3	YAL011W	MAF1	P41910	395 aa		4.56	□□□□□ -1.68
SWC3	YAL011W	YJL107C	P42947	387 aa		4.56	□□□□□ -1.68
SWC3	YAL011W	YFL012W	P43580	148 aa		4.56	□□□□□ -1.68
SWC3	YAL011W	PAN2	P53010	1115 aa	Predicted RBP	4.56	□□□□□ -1.68
SWC3	YAL011W	YGR127W	P53275	312 aa		4.56	□□□□□ -1.68
SWC3	YAL011W	UBP2	Q01476	1272 aa		4.56	□□□□□ -1.68
SWC3	YAL011W	TRI1	Q05024	226 aa		4.56	□□□□□ -1.68
SWC3	YAL011W	YLR456W	Q06199	204 aa		4.56	□□□□□ -1.68
SWC3	YAL011W	TPO1	Q07824	586 aa		4.56	□□□□□ -1.68
SWC3	YAL011W	YIL002W-A	Q3E7Z5	69 aa		4.56	□□□□□ -1.68
SWC3	YAL011W	AI5_ALPHA	Q9ZZX1	630 aa		4.56	□□□□□ -1.68
SWC3	YAL011W	HTS1	P07263	546 aa	Known RBP	4.55	□□□□□ -1.68
SWC3	YAL011W	RPL11A	P0C0W9	174 aa	Known RBP	4.55	□□□□□ -1.68
SWC3	YAL011W	CBS1	P14066	229 aa		4.55	□□□□□ -1.68
SWC3	YAL011W	AMS1	P22855	1083 aa		4.55	□□□□□ -1.68
SWC3	YAL011W	MF(ALPHA)2	P32435	120 aa		4.55	□□□□□ -1.68
SWC3	YAL011W	YSC84	P32793	468 aa		4.55	□□□□□ -1.68
SWC3	YAL011W	YKR051W	P36142	418 aa		4.55	□□□□□ -1.68
SWC3	YAL011W	DRE2	P36152	348 aa		4.55	□□□□□ -1.68
SWC3	YAL011W	FZO1	P38297	855 aa		4.55	□□□□□ -1.68
SWC3	YAL011W	YEL057C	P39983	233 aa		4.55	□□□□□ -1.68
SWC3	YAL011W	VMA13	P41807	478 aa	Known RBP	4.55	□□□□□ -1.68
SWC3	YAL011W	RRT5	P43607	289 aa		4.55	□□□□□ -1.68
SWC3	YAL011W	RFX1	P48743	811 aa		4.55	□□□□□ -1.68
SWC3	YAL011W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
SWC3	YAL011W	SLU7	Q02775	382 aa	Known RBP	4.55	□□□□□ -1.68
SWC3	YAL011W	EFR3	Q03653	782 aa	Known RBP	4.55	□□□□□ -1.68
SWC3	YAL011W	RCO1	Q04779	684 aa		4.55	□□□□□ -1.68
SWC3	YAL011W	DFG5	Q05031	458 aa		4.55	□□□□□ -1.68
SWC3	YAL011W	SLP1	Q12232	587 aa		4.55	□□□□□ -1.68
SWC3	YAL011W	RPL11B	Q3E757	174 aa	Predicted RBP	4.55	□□□□□ -1.68
SWC3	YAL011W	TDH1	P00360	332 aa	Known RBP	4.54	□□□□□ -1.68
SWC3	YAL011W	GLN4	P13188	809 aa	Known RBP	4.54	□□□□□ -1.68
SWC3	YAL011W	RSA4	P25382	515 aa	Known RBP	4.54	□□□□□ -1.68
SWC3	YAL011W	GID7	P25569	745 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	GAC1	P28006	793 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	ACP1	P32463	125 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	DOA4	P32571	926 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	MRT4	P33201	236 aa	Known RBP	4.54	□□□□□ -1.68
SWC3	YAL011W	MSC7	P38694	644 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	PEP8	P40335	379 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	RLP7	P40693	322 aa	Known RBP	4.54	□□□□□ -1.68
SWC3	YAL011W	BST1	P43571	1029 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	FAR3	P46671	204 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	ALT2	P52892	507 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	YNL144C	P53907	740 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	YNL134C	P53912	376 aa	Known RBP	4.54	□□□□□ -1.68
SWC3	YAL011W	LGE1	Q02796	332 aa	Known RBP	4.54	□□□□□ -1.68
SWC3	YAL011W	RNY1	Q02933	434 aa	Known RBP	4.54	□□□□□ -1.68
SWC3	YAL011W	SEG1	Q04279	960 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	FMP45	Q07651	309 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	RCL1	Q08096	367 aa	Predicted RBP	4.54	□□□□□ -1.68
SWC3	YAL011W	RTK1	Q12100	620 aa	Predicted RBP	4.54	□□□□□ -1.68
SWC3	YAL011W	YOR022C	Q12204	715 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	TAF3	Q12297	353 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	SPE4	Q12455	300 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	YBR182C-A	Q8TGU6	64 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
SWC3	YAL011W	GPA2	P10823	449 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	SNT1	P25357	1226 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	URA10	P30402	227 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	MRP20	P32387	263 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	AIM26	P32858	118 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	CYM1	P32898	989 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	CSE2	P33308	149 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	ECM4	P36156	370 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	SRO77	P38163	1010 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	MUP3	P38734	546 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	FSH1	P38777	243 aa	Known RBP	4.54	□□□□□ -1.68
SWC3	YAL011W	SSZ1	P38788	538 aa	Known RBP	4.54	□□□□□ -1.68
SWC3	YAL011W	AIM18	P38884	321 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	PRK1	P40494	810 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	YIL077C	P40508	320 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	MND2	P40577	368 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	CHS6	P40955	746 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	AZR1	P50080	613 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	PPT1	P53043	513 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	USE1	P53146	245 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	NOP15	P53927	220 aa	Predicted RBP	4.54	□□□□□ -1.68
SWC3	YAL011W	SLT2	Q00772	484 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	BOP2	Q06150	570 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	DNL4	Q08387	944 aa	Predicted RBP	4.54	□□□□□ -1.68
SWC3	YAL011W	DDC1	Q08949	612 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	APC2	Q12440	853 aa		4.54	□□□□□ -1.68
SWC3	YAL011W	PFK27	Q12471	397 aa	Predicted RBP	4.54	□□□□□ -1.68
SWC3	YAL011W	MEI5	P32489	222 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms