RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C DBR1P24309 405 aaKnown RBP13.05□□□□□ -0.32
SSA1YAL005C COX13P32799 129 aa13.05□□□□□ -0.32
SSA1YAL005C RMA1P36001 430 aaKnown RBP13.05□□□□□ -0.32
SSA1YAL005C MDM34P53083 459 aa13.05□□□□□ -0.32
SSA1YAL005C SGF73P53165 657 aa13.05□□□□□ -0.32
SSA1YAL005C SWS2P53937 143 aa13.05□□□□□ -0.32
SSA1YAL005C TRM82Q03774 444 aa13.05□□□□□ -0.32
SSA1YAL005C MFB1Q04922 465 aa13.05□□□□□ -0.32
SSA1YAL005C YDR338CQ05497 695 aa13.05□□□□□ -0.32
SSA1YAL005C YPL245WQ12179 454 aaKnown RBP13.05□□□□□ -0.32
SSA1YAL005C SRN2Q99176 213 aa13.05□□□□□ -0.32
SSA1YAL005C PRP6P19735 899 aaPredicted RBP13.04□□□□□ -0.32
SSA1YAL005C TFB1P32776 642 aa13.04□□□□□ -0.32
SSA1YAL005C CTK1Q03957 528 aaKnown RBP13.04□□□□□ -0.32
SSA1YAL005C YMR034CQ05131 434 aaPredicted RBP13.04□□□□□ -0.32
SSA1YAL005C ATG34Q12292 412 aa13.04□□□□□ -0.32
SSA1YAL005C RGT2Q12300 763 aa13.04□□□□□ -0.32
SSA1YAL005C YBL029WP38201 376 aa13.03□□□□□ -0.32
SSA1YAL005C ARN1P38731 627 aa13.03□□□□□ -0.32
SSA1YAL005C GIC1P38785 314 aa13.03□□□□□ -0.32
SSA1YAL005C FRT2P39734 528 aa13.03□□□□□ -0.32
SSA1YAL005C COS12P53053 380 aa13.03□□□□□ -0.32
SSA1YAL005C SPC24Q04477 213 aa13.03□□□□□ -0.32
SSA1YAL005C AVO1Q08236 1176 aa13.03□□□□□ -0.32
SSA1YAL005C YPL225WQ08971 146 aaKnown RBP13.03□□□□□ -0.32
SSA1YAL005C SLF1Q12034 447 aaKnown RBP13.03□□□□□ -0.32
SSA1YAL005C YPR011CQ12251 326 aa13.03□□□□□ -0.32
SSA1YAL005C GPR1Q12361 961 aa13.03□□□□□ -0.32
SSA1YAL005C RRP36Q12481 300 aaPredicted RBP13.03□□□□□ -0.32
SSA1YAL005C MHT1Q12525 324 aa13.03□□□□□ -0.32
SSA1YAL005C STT4P37297 1900 aa13.03□□□□□ -0.32
SSA1YAL005C PPH21P23594 369 aa13.03□□□□□ -0.32
SSA1YAL005C YEN1P40028 759 aa13.03□□□□□ -0.32
SSA1YAL005C ZIM17P42844 174 aa13.03□□□□□ -0.32
SSA1YAL005C YNL260CP53846 198 aa13.03□□□□□ -0.32
SSA1YAL005C VHS1Q03785 461 aa13.03□□□□□ -0.32
SSA1YAL005C RRP9Q06506 573 aaKnown RBP13.03□□□□□ -0.32
SSA1YAL005C OSW1Q08692 278 aa13.03□□□□□ -0.32
SSA1YAL005C HXK2P04807 486 aaKnown RBP13.02□□□□□ -0.32
SSA1YAL005C RPL17AP05740 184 aaKnown RBP13.02□□□□□ -0.32
SSA1YAL005C PMR1P13586 950 aa13.02□□□□□ -0.32
SSA1YAL005C RED1P14291 827 aa13.02□□□□□ -0.32
SSA1YAL005C TRM1P15565 570 aaKnown RBP13.02□□□□□ -0.32
SSA1YAL005C PDB1P32473 366 aaKnown RBP13.02□□□□□ -0.32
SSA1YAL005C MRPL37P36532 105 aa13.02□□□□□ -0.32
SSA1YAL005C TSC10P38342 320 aa13.02□□□□□ -0.32
SSA1YAL005C YHL008CP38750 627 aa13.02□□□□□ -0.32
SSA1YAL005C PTR3P43606 678 aa13.02□□□□□ -0.32
SSA1YAL005C HSH49Q99181 213 aaPredicted RBP13.02□□□□□ -0.32
SSA1YAL005C SSU1P41930 458 aa13.01□□□□□ -0.33
SSA1YAL005C CIS3P47001 227 aa13.01□□□□□ -0.33
SSA1YAL005C YGR053CP53234 283 aa13.01□□□□□ -0.33
SSA1YAL005C GTR1Q00582 310 aa13.01□□□□□ -0.33
SSA1YAL005C SDH1Q00711 640 aa13.01□□□□□ -0.33
SSA1YAL005C IOC2Q12072 812 aa13.01□□□□□ -0.33
SSA1YAL005C ATG29Q12092 213 aa13.01□□□□□ -0.33
SSA1YAL005C CMR1Q12510 522 aaKnown RBP13.01□□□□□ -0.33
SSA1YAL005C DST1P07273 309 aa13.01□□□□□ -0.33
SSA1YAL005C HXT4P32467 576 aa13.01□□□□□ -0.33
SSA1YAL005C STE14P32584 239 aa13.01□□□□□ -0.33
SSA1YAL005C HXT6P39003 570 aaKnown RBP13.01□□□□□ -0.33
SSA1YAL005C HXT7P39004 570 aa13.01□□□□□ -0.33
SSA1YAL005C YPR202WQ08993 238 aa13.01□□□□□ -0.33
SSA1YAL005C HUA2Q12134 243 aa13.01□□□□□ -0.33
SSA1YAL005C SUL2Q12325 893 aa13.01□□□□□ -0.33
SSA1YAL005C EMC3P36039 253 aa13□□□□□ -0.33
SSA1YAL005C CUE2P36075 443 aaKnown RBP13□□□□□ -0.33
SSA1YAL005C BMT2P38278 337 aa13□□□□□ -0.33
SSA1YAL005C NDE1P40215 560 aa13□□□□□ -0.33
SSA1YAL005C NUP85P46673 744 aa13□□□□□ -0.33
SSA1YAL005C RPN8Q08723 338 aaKnown RBP13□□□□□ -0.33
SSA1YAL005C POL2P21951 2222 aaKnown RBP13□□□□□ -0.33
SSA1YAL005C OCA4P25366 362 aa13□□□□□ -0.33
SSA1YAL005C DGR2P32330 852 aa13□□□□□ -0.33
SSA1YAL005C YPS6P40583 537 aa13□□□□□ -0.33
SSA1YAL005C KEL2P50090 882 aa13□□□□□ -0.33
SSA1YAL005C SUN4P53616 420 aa13□□□□□ -0.33
SSA1YAL005C CDA1Q06702 301 aa13□□□□□ -0.33
SSA1YAL005C CDC31P06704 161 aaKnown RBP12.99□□□□□ -0.33
SSA1YAL005C CAF4P36130 643 aa12.99□□□□□ -0.33
SSA1YAL005C TRM7P38238 310 aaKnown RBP12.99□□□□□ -0.33
SSA1YAL005C NAS6P50086 228 aa12.99□□□□□ -0.33
SSA1YAL005C MPS1P54199 764 aa12.99□□□□□ -0.33
SSA1YAL005C RPS4AP0CX35 261 aaKnown RBP12.98□□□□□ -0.33
SSA1YAL005C RPS4BP0CX36 261 aaKnown RBP12.98□□□□□ -0.33
SSA1YAL005C SGV1P23293 657 aaKnown RBP12.98□□□□□ -0.33
SSA1YAL005C AZF1P41696 914 aa12.98□□□□□ -0.33
SSA1YAL005C EAF1Q06337 982 aa12.98□□□□□ -0.33
SSA1YAL005C AI3P03877 415 aa12.98□□□□□ -0.33
SSA1YAL005C ARD1P07347 238 aaPredicted RBP12.98□□□□□ -0.33
SSA1YAL005C ELO1P39540 310 aa12.98□□□□□ -0.33
SSA1YAL005C MEP2P41948 499 aa12.98□□□□□ -0.33
SSA1YAL005C CCT7P42943 550 aaKnown RBP12.98□□□□□ -0.33
SSA1YAL005C HXT16P47185 567 aa12.98□□□□□ -0.33
SSA1YAL005C HXT15P54854 567 aa12.98□□□□□ -0.33
SSA1YAL005C YDR124WQ04608 324 aa12.98□□□□□ -0.33
SSA1YAL005C GTB1Q04924 702 aa12.98□□□□□ -0.33
SSA1YAL005C BSC2Q05611 235 aa12.98□□□□□ -0.33
SSA1YAL005C THI73Q07904 523 aa12.98□□□□□ -0.33
SSA1YAL005C DBP10Q12389 995 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 5,963 RNA–protein pairs in 39.5 ms