RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 ERCC3P19447 782 aa10.47□□□□□ -0.73
SCARB2-225ENST00000640900 GNA11P29992 359 aa10.47□□□□□ -0.73
SCARB2-225ENST00000640900 MRPL12P52815 198 aaKnown RBP10.47□□□□□ -0.73
SCARB2-225ENST00000640900 NAPAP54920 295 aa10.47□□□□□ -0.73
SCARB2-225ENST00000640900 CCNA1P78396 465 aa10.47□□□□□ -0.73
SCARB2-225ENST00000640900 GSE1Q14687 1217 aa10.47□□□□□ -0.73
SCARB2-225ENST00000640900 USH1GQ495M9 461 aa10.47□□□□□ -0.73
SCARB2-225ENST00000640900 PAXIP1Q6ZW49 1069 aaPredicted RBP10.47□□□□□ -0.73
SCARB2-225ENST00000640900 BLIDQ8IZY5 108 aa10.47□□□□□ -0.73
SCARB2-225ENST00000640900 ANKRD13CQ8N6S4 541 aa10.47□□□□□ -0.73
SCARB2-225ENST00000640900 SPRYD3Q8NCJ5 442 aa10.47□□□□□ -0.73
SCARB2-225ENST00000640900 OXER1Q8TDS5 423 aa10.47□□□□□ -0.73
SCARB2-225ENST00000640900 CUL5Q93034 780 aa10.47□□□□□ -0.73
SCARB2-225ENST00000640900 ACAD9Q9H845 621 aa10.47□□□□□ -0.73
SCARB2-225ENST00000640900 C6orf50Q9HD87 102 aa10.47□□□□□ -0.73
SCARB2-225ENST00000640900 A1CFQ9NQ94 594 aaKnown RBP10.47□□□□□ -0.73
SCARB2-225ENST00000640900 RNF146Q9NTX7 359 aa10.47□□□□□ -0.73
SCARB2-225ENST00000640900 COL20A1Q9P218 1284 aa10.47□□□□□ -0.73
SCARB2-225ENST00000640900 FBXO40Q9UH90 709 aa10.47□□□□□ -0.73
SCARB2-225ENST00000640900 RPTORQ8N122 1335 aa10.47□□□□□ -0.73
SCARB2-225ENST00000640900 RBBP6Q7Z6E9 1792 aaKnown RBP10.47□□□□□ -0.73
SCARB2-225ENST00000640900 ZNF236Q9UL36 1845 aa10.47□□□□□ -0.73
SCARB2-225ENST00000640900 LCTP09848 1927 aa10.46□□□□□ -0.73
SCARB2-225ENST00000640900 BTBD18B2RXH4 712 aa10.46□□□□□ -0.73
SCARB2-225ENST00000640900 KIF28PB7ZC32 967 aa10.46□□□□□ -0.73
SCARB2-225ENST00000640900 STRNO43815 780 aa10.46□□□□□ -0.73
SCARB2-225ENST00000640900 ZSCAN22P10073 491 aaPredicted RBP10.46□□□□□ -0.73
SCARB2-225ENST00000640900 ALAS1P13196 640 aa10.46□□□□□ -0.73
SCARB2-225ENST00000640900 ADCY7P51828 1080 aa10.46□□□□□ -0.73
SCARB2-225ENST00000640900 NLRP5P59047 1200 aa10.46□□□□□ -0.73
SCARB2-225ENST00000640900 NUCB2P80303 420 aa10.46□□□□□ -0.73
SCARB2-225ENST00000640900 GUCY1B3Q02153 619 aa10.46□□□□□ -0.73
SCARB2-225ENST00000640900 RESTQ13127 1097 aa10.46□□□□□ -0.73
SCARB2-225ENST00000640900 EARS2Q5JPH6 523 aaKnown RBP10.46□□□□□ -0.73
SCARB2-225ENST00000640900 MCTP2Q6DN12 878 aa10.46□□□□□ -0.73
SCARB2-225ENST00000640900 MCF2L2Q86YR7 1114 aa10.46□□□□□ -0.73
SCARB2-225ENST00000640900 DIS3L2Q8IYB7 885 aaKnown RBP10.46□□□□□ -0.73
SCARB2-225ENST00000640900 JMYQ8N9B5 988 aa10.46□□□□□ -0.73
SCARB2-225ENST00000640900 FAM133AQ8N9E0 248 aa10.46□□□□□ -0.73
SCARB2-225ENST00000640900 BICD2Q8TD16 824 aa10.46□□□□□ -0.73
SCARB2-225ENST00000640900 SYTL5Q8TDW5 730 aaPredicted RBP10.46□□□□□ -0.73
SCARB2-225ENST00000640900 USP6NLQ92738 828 aa10.46□□□□□ -0.73
SCARB2-225ENST00000640900 FGD4Q96M96 766 aa10.46□□□□□ -0.73
SCARB2-225ENST00000640900 PAGR1Q9BTK6 254 aa10.46□□□□□ -0.73
SCARB2-225ENST00000640900 WBP1LQ9NX94 342 aa10.46□□□□□ -0.73
SCARB2-225ENST00000640900 CYP39A1Q9NYL5 469 aa10.46□□□□□ -0.73
SCARB2-225ENST00000640900 CPA4Q9UI42 421 aa10.46□□□□□ -0.73
SCARB2-225ENST00000640900 PCDHA6Q9UN73 950 aa10.46□□□□□ -0.73
SCARB2-225ENST00000640900 PCDHA8Q9Y5H6 950 aa10.46□□□□□ -0.73
SCARB2-225ENST00000640900 HTTP42858 3142 aa10.46□□□□□ -0.74
SCARB2-225ENST00000640900 DOCK3Q8IZD9 2030 aa10.45□□□□□ -0.74
SCARB2-225ENST00000640900 ASTN1O14525 1302 aa10.45□□□□□ -0.74
SCARB2-225ENST00000640900 PFASO15067 1338 aa10.45□□□□□ -0.74
SCARB2-225ENST00000640900 GCOM1H8Y6P7 765 aaPredicted RBP10.45□□□□□ -0.74
SCARB2-225ENST00000640900 FOSP01100 380 aaPredicted RBP10.45□□□□□ -0.74
SCARB2-225ENST00000640900 POLR2MP0CAP2 368 aa10.45□□□□□ -0.74
SCARB2-225ENST00000640900 CTGFP29279 349 aa10.45□□□□□ -0.74
SCARB2-225ENST00000640900 MAPK4P31152 587 aa10.45□□□□□ -0.74
SCARB2-225ENST00000640900 KRT2P35908 639 aa10.45□□□□□ -0.74
SCARB2-225ENST00000640900 MNX1P50219 401 aaPredicted RBP10.45□□□□□ -0.74
SCARB2-225ENST00000640900 RPS6P62753 249 aaKnown RBP10.45□□□□□ -0.74
SCARB2-225ENST00000640900 CAP1Q01518 475 aa10.45□□□□□ -0.74
SCARB2-225ENST00000640900 GRM1Q13255 1194 aa10.45□□□□□ -0.74
SCARB2-225ENST00000640900 NR5A1Q13285 461 aa10.45□□□□□ -0.74
SCARB2-225ENST00000640900 AP3B2Q13367 1082 aa10.45□□□□□ -0.74
SCARB2-225ENST00000640900 TRIM29Q14134 588 aa10.45□□□□□ -0.74
SCARB2-225ENST00000640900 GRB14Q14449 540 aa10.45□□□□□ -0.74
SCARB2-225ENST00000640900 MORN1Q5T089 497 aa10.45□□□□□ -0.74
SCARB2-225ENST00000640900 USP17L6PQ6QN14 398 aa10.45□□□□□ -0.74
SCARB2-225ENST00000640900 CLEC17AQ6ZS10 378 aa10.45□□□□□ -0.74
SCARB2-225ENST00000640900 NOSTRINQ8IVI9 506 aa10.45□□□□□ -0.74
SCARB2-225ENST00000640900 REXO1Q8N1G1 1221 aaKnown RBP10.45□□□□□ -0.74
SCARB2-225ENST00000640900 EFCC1Q9HA90 598 aa10.45□□□□□ -0.74
SCARB2-225ENST00000640900 CHMP5Q9NZZ3 219 aa10.45□□□□□ -0.74
SCARB2-225ENST00000640900 GJD2Q9UKL4 321 aa10.45□□□□□ -0.74
SCARB2-225ENST00000640900 CTDP1Q9Y5B0 961 aaPredicted RBP10.45□□□□□ -0.74
SCARB2-225ENST00000640900 ZNFX1Q9P2E3 1918 aaKnown RBP10.45□□□□□ -0.74
SCARB2-225ENST00000640900 PLXNB2O15031 1838 aa10.44□□□□□ -0.74
SCARB2-225ENST00000640900 LOC102724159A0A0B4J2E5 919 aa10.44□□□□□ -0.74
SCARB2-225ENST00000640900 H3BQV1 296 aa10.44□□□□□ -0.74
SCARB2-225ENST00000640900 F13A1P00488 732 aa10.44□□□□□ -0.74
SCARB2-225ENST00000640900 HOXC6P09630 235 aa10.44□□□□□ -0.74
SCARB2-225ENST00000640900 PTPREP23469 700 aa10.44□□□□□ -0.74
SCARB2-225ENST00000640900 EDNRBP24530 442 aa10.44□□□□□ -0.74
SCARB2-225ENST00000640900 SREBF1P36956 1147 aa10.44□□□□□ -0.74
SCARB2-225ENST00000640900 TOB1P50616 345 aaPredicted RBP10.44□□□□□ -0.74
SCARB2-225ENST00000640900 MAP2K1Q02750 393 aaPredicted RBP10.44□□□□□ -0.74
SCARB2-225ENST00000640900 BAATQ14032 418 aaPredicted RBP10.44□□□□□ -0.74
SCARB2-225ENST00000640900 PLS1Q14651 629 aa10.44□□□□□ -0.74
SCARB2-225ENST00000640900 PWP2Q15269 919 aaKnown RBP10.44□□□□□ -0.74
SCARB2-225ENST00000640900 SAFBQ15424 915 aaKnown RBP eCLIP10.44□□□□□ -0.74
SCARB2-225ENST00000640900 UBE2SQ16763 222 aa10.44□□□□□ -0.74
SCARB2-225ENST00000640900 ZNF792Q3KQV3 632 aa10.44□□□□□ -0.74
SCARB2-225ENST00000640900 IFFO2Q5TF58 517 aa10.44□□□□□ -0.74
SCARB2-225ENST00000640900 RNF207Q6ZRF8 634 aa10.44□□□□□ -0.74
SCARB2-225ENST00000640900 BRAPQ7Z569 592 aa10.44□□□□□ -0.74
SCARB2-225ENST00000640900 GPR142Q7Z601 462 aa10.44□□□□□ -0.74
SCARB2-225ENST00000640900 NCAPG2Q86XI2 1143 aa10.44□□□□□ -0.74
SCARB2-225ENST00000640900 RASGRP4Q8TDF6 673 aa10.44□□□□□ -0.74
SCARB2-225ENST00000640900 MORC4Q8TE76 937 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms