RNA–Protein interactions for RNA: ENST00000590701.5

ERCC1-211, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-211ENST00000590701 SUPT20HL2P0C7V6 817 aa17.39■□□□□ 0.37
ERCC1-211ENST00000590701 TSPY3P0CV98 308 aa17.39■□□□□ 0.37
ERCC1-211ENST00000590701 TSPY8P0CW00 308 aa17.39■□□□□ 0.37
ERCC1-211ENST00000590701 TDO2P48775 406 aa17.39■□□□□ 0.37
ERCC1-211ENST00000590701 PURAQ00577 322 aaKnown RBP17.39■□□□□ 0.37
ERCC1-211ENST00000590701 NBPF20Q3BBV1 942 aa17.39■□□□□ 0.37
ERCC1-211ENST00000590701 TKFCQ3LXA3 575 aa17.39■□□□□ 0.37
ERCC1-211ENST00000590701 DUSP28Q4G0W2 176 aa17.39■□□□□ 0.37
ERCC1-211ENST00000590701 FAM47CQ5HY64 1035 aa17.39■□□□□ 0.37
ERCC1-211ENST00000590701 RASGRP2Q7LDG7 609 aa17.39■□□□□ 0.37
ERCC1-211ENST00000590701 FAM160B2Q86V87 743 aa17.39■□□□□ 0.37
ERCC1-211ENST00000590701 HERC6Q8IVU3 1022 aa17.39■□□□□ 0.37
ERCC1-211ENST00000590701 WDR11Q9BZH6 1224 aa17.39■□□□□ 0.37
ERCC1-211ENST00000590701 FTOQ9C0B1 505 aaKnown RBP eCLIP17.39■□□□□ 0.37
ERCC1-211ENST00000590701 ZBTB40Q9NUA8 1239 aa17.39■□□□□ 0.37
ERCC1-211ENST00000590701 PTPRSQ13332 1948 aa17.39■□□□□ 0.37
ERCC1-211ENST00000590701 M0R2C6 588 aa17.38■□□□□ 0.37
ERCC1-211ENST00000590701 GPAA1O43292 621 aa17.38■□□□□ 0.37
ERCC1-211ENST00000590701 LPXNO60711 386 aa17.38■□□□□ 0.37
ERCC1-211ENST00000590701 GPR37L1O60883 481 aa17.38■□□□□ 0.37
ERCC1-211ENST00000590701 PFKMP08237 780 aa17.38■□□□□ 0.37
ERCC1-211ENST00000590701 ACTN1P12814 892 aa17.38■□□□□ 0.37
ERCC1-211ENST00000590701 SLC1A4P43007 532 aa17.38■□□□□ 0.37
ERCC1-211ENST00000590701 TMCO2Q7Z6W1 182 aaPredicted RBP17.38■□□□□ 0.37
ERCC1-211ENST00000590701 IFNL3Q8IZI9 196 aa17.38■□□□□ 0.37
ERCC1-211ENST00000590701 SLC9A7Q96T83 725 aa17.38■□□□□ 0.37
ERCC1-211ENST00000590701 VTA1Q9NP79 307 aa17.38■□□□□ 0.37
ERCC1-211ENST00000590701 INCENPQ9NQS7 918 aa17.38■□□□□ 0.37
ERCC1-211ENST00000590701 PRR12Q9ULL5 1215 aa17.38■□□□□ 0.37
ERCC1-211ENST00000590701 MTMR7Q9Y216 660 aa17.38■□□□□ 0.37
ERCC1-211ENST00000590701 PATL2C9JE40 543 aaKnown RBP17.37■□□□□ 0.37
ERCC1-211ENST00000590701 RNF113AO15541 343 aaKnown RBP17.37■□□□□ 0.37
ERCC1-211ENST00000590701 BAATQ14032 418 aaPredicted RBP17.37■□□□□ 0.37
ERCC1-211ENST00000590701 RCSD1Q6JBY9 416 aa17.37■□□□□ 0.37
ERCC1-211ENST00000590701 RETREG2Q8NC44 543 aa17.37■□□□□ 0.37
ERCC1-211ENST00000590701 PHOSPHO2Q8TCD6 241 aa17.37■□□□□ 0.37
ERCC1-211ENST00000590701 MORC4Q8TE76 937 aa17.37■□□□□ 0.37
ERCC1-211ENST00000590701 APPBP2Q92624 585 aa17.37■□□□□ 0.37
ERCC1-211ENST00000590701 GMCL1Q96IK5 515 aa17.37■□□□□ 0.37
ERCC1-211ENST00000590701 ZNF287Q9HBT7 754 aa17.37■□□□□ 0.37
ERCC1-211ENST00000590701 POLR3EQ9NVU0 708 aa17.37■□□□□ 0.37
ERCC1-211ENST00000590701 SYNPO2Q9UMS6 1093 aa17.37■□□□□ 0.37
ERCC1-211ENST00000590701 BRWD1Q9NSI6 2320 aa17.36■□□□□ 0.37
ERCC1-211ENST00000590701 LCHNA4D1U4 455 aa17.36■□□□□ 0.37
ERCC1-211ENST00000590701 KIF28PB7ZC32 967 aa17.36■□□□□ 0.37
ERCC1-211ENST00000590701 TSHZ3Q63HK5 1081 aa17.36■□□□□ 0.37
ERCC1-211ENST00000590701 ALYREFQ86V81 257 aaKnown RBP17.36■□□□□ 0.37
ERCC1-211ENST00000590701 KBTBD3Q8NAB2 608 aa17.36■□□□□ 0.37
ERCC1-211ENST00000590701 COPS5Q92905 334 aa17.36■□□□□ 0.37
ERCC1-211ENST00000590701 SEC62Q99442 399 aaKnown RBP17.36■□□□□ 0.37
ERCC1-211ENST00000590701 MTG1Q9BT17 334 aaPredicted RBP17.36■□□□□ 0.37
ERCC1-211ENST00000590701 GPHNQ9NQX3 736 aaPredicted RBP17.36■□□□□ 0.37
ERCC1-211ENST00000590701 CCPG1Q9ULG6 757 aa17.36■□□□□ 0.37
ERCC1-211ENST00000590701 SCN10AQ9Y5Y9 1956 aa17.35■□□□□ 0.37
ERCC1-211ENST00000590701 PI4K2BG5E9Z4 385 aa17.35■□□□□ 0.37
ERCC1-211ENST00000590701 NMT2O60551 498 aa17.35■□□□□ 0.37
ERCC1-211ENST00000590701 CHMP4BP1P59074 171 aa17.35■□□□□ 0.37
ERCC1-211ENST00000590701 TTBK2Q6IQ55 1244 aa17.35■□□□□ 0.37
ERCC1-211ENST00000590701 OR6J1Q8NGC5 347 aa17.35■□□□□ 0.37
ERCC1-211ENST00000590701 LRRCC1Q9C099 1032 aa17.35■□□□□ 0.37
ERCC1-211ENST00000590701 ECHDC1Q9NTX5 307 aa17.35■□□□□ 0.37
ERCC1-211ENST00000590701 RBM47A0AV96 593 aaKnown RBP17.34■□□□□ 0.37
ERCC1-211ENST00000590701 PLA2G6O60733 806 aa17.34■□□□□ 0.37
ERCC1-211ENST00000590701 RFC2P35250 354 aa17.34■□□□□ 0.37
ERCC1-211ENST00000590701 ALDH5A1P51649 535 aaPredicted RBP17.34■□□□□ 0.37
ERCC1-211ENST00000590701 HNRNPUQ00839 825 aaKnown RBP eCLIP17.34■□□□□ 0.37
ERCC1-211ENST00000590701 GPNMBQ14956 572 aa17.34■□□□□ 0.37
ERCC1-211ENST00000590701 IL17RBQ9NRM6 502 aa17.34■□□□□ 0.37
ERCC1-211ENST00000590701 STX8Q9UNK0 236 aa17.34■□□□□ 0.37
ERCC1-211ENST00000590701 NFIBO00712 420 aa17.33■□□□□ 0.36
ERCC1-211ENST00000590701 GNAT2P19087 354 aa17.33■□□□□ 0.36
ERCC1-211ENST00000590701 SLC16A2P36021 539 aa17.33■□□□□ 0.36
ERCC1-211ENST00000590701 CPT1AP50416 773 aa17.33■□□□□ 0.36
ERCC1-211ENST00000590701 PDE4BQ07343 736 aa17.33■□□□□ 0.36
ERCC1-211ENST00000590701 GDPD5Q8WTR4 605 aa17.33■□□□□ 0.36
ERCC1-211ENST00000590701 MTUS1Q9ULD2 1270 aa17.33■□□□□ 0.36
ERCC1-211ENST00000590701 COL4A4P53420 1690 aaPredicted RBP17.32■□□□□ 0.36
ERCC1-211ENST00000590701 PLIN4Q96Q06 1357 aa17.32■□□□□ 0.36
ERCC1-211ENST00000590701 PTPDC1A2A3K4 754 aa17.32■□□□□ 0.36
ERCC1-211ENST00000590701 PITPNM1O00562 1244 aa17.32■□□□□ 0.36
ERCC1-211ENST00000590701 ICAM1P05362 532 aa17.32■□□□□ 0.36
ERCC1-211ENST00000590701 CTDSPL2Q05D32 466 aa17.32■□□□□ 0.36
ERCC1-211ENST00000590701 ZBED2Q9BTP6 218 aa17.32■□□□□ 0.36
ERCC1-211ENST00000590701 ADD3Q9UEY8 706 aaKnown RBP17.32■□□□□ 0.36
ERCC1-211ENST00000590701 DDX19BQ9UMR2 479 aa17.32■□□□□ 0.36
ERCC1-211ENST00000590701 MUC6Q6W4X9 2439 aa17.32■□□□□ 0.36
ERCC1-211ENST00000590701 CALML3P27482 149 aa17.31■□□□□ 0.36
ERCC1-211ENST00000590701 KCNJ6P48051 423 aa17.31■□□□□ 0.36
ERCC1-211ENST00000590701 WDR5P61964 334 aaKnown RBP17.31■□□□□ 0.36
ERCC1-211ENST00000590701 DEFB103AP81534 67 aa17.31■□□□□ 0.36
ERCC1-211ENST00000590701 PPARAQ07869 468 aa17.31■□□□□ 0.36
ERCC1-211ENST00000590701 TCTN1Q2MV58 587 aa17.31■□□□□ 0.36
ERCC1-211ENST00000590701 NFRKBQ6P4R8 1299 aa17.31■□□□□ 0.36
ERCC1-211ENST00000590701 SUGCTQ9HAC7 445 aa17.31■□□□□ 0.36
ERCC1-211ENST00000590701 TANC1Q9C0D5 1861 aa17.31■□□□□ 0.36
ERCC1-211ENST00000590701 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.3■□□□□ 0.36
ERCC1-211ENST00000590701 A6NJR5 290 aa17.3■□□□□ 0.36
ERCC1-211ENST00000590701 BFSP2Q13515 415 aa17.3■□□□□ 0.36
ERCC1-211ENST00000590701 PTGISQ16647 500 aa17.3■□□□□ 0.36
ERCC1-211ENST00000590701 CCDC96Q2M329 555 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms