RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 MBD3O95983 291 aa14.51□□□□□ -0.09
VMP1-202ENST00000585847 MAPK8IP2Q13387 824 aaPredicted RBP14.51□□□□□ -0.09
VMP1-202ENST00000585847 PPP1R18Q6NYC8 613 aa14.51□□□□□ -0.09
VMP1-202ENST00000585847 FBXO11Q86XK2 927 aa14.51□□□□□ -0.09
VMP1-202ENST00000585847 COA7Q96BR5 231 aa14.51□□□□□ -0.09
VMP1-202ENST00000585847 ZNF396Q96N95 335 aaPredicted RBP14.51□□□□□ -0.09
VMP1-202ENST00000585847 GLT8D2Q9H1C3 349 aa14.51□□□□□ -0.09
VMP1-202ENST00000585847 SEC63Q9UGP8 760 aaKnown RBP14.51□□□□□ -0.09
VMP1-202ENST00000585847 GJD2Q9UKL4 321 aa14.51□□□□□ -0.09
VMP1-202ENST00000585847 PNMA2Q9UL42 364 aa14.51□□□□□ -0.09
VMP1-202ENST00000585847 CCPG1Q9ULG6 757 aa14.51□□□□□ -0.09
VMP1-202ENST00000585847 PTPN22Q9Y2R2 807 aa14.51□□□□□ -0.09
VMP1-202ENST00000585847 RBBP6Q7Z6E9 1792 aaKnown RBP14.51□□□□□ -0.09
VMP1-202ENST00000585847 POTEFA5A3E0 1075 aa14.5□□□□□ -0.09
VMP1-202ENST00000585847 NFIBO00712 420 aa14.5□□□□□ -0.09
VMP1-202ENST00000585847 SLC25A27O95847 323 aa14.5□□□□□ -0.09
VMP1-202ENST00000585847 ALAS1P13196 640 aa14.5□□□□□ -0.09
VMP1-202ENST00000585847 PFKFB3Q16875 520 aaPredicted RBP14.5□□□□□ -0.09
VMP1-202ENST00000585847 USH1GQ495M9 461 aa14.5□□□□□ -0.09
VMP1-202ENST00000585847 WWC2Q6AWC2 1192 aa14.5□□□□□ -0.09
VMP1-202ENST00000585847 GPR142Q7Z601 462 aa14.5□□□□□ -0.09
VMP1-202ENST00000585847 NCAPG2Q86XI2 1143 aa14.5□□□□□ -0.09
VMP1-202ENST00000585847 TBC1D5Q92609 795 aa14.5□□□□□ -0.09
VMP1-202ENST00000585847 GPKOWQ92917 476 aaPredicted RBP eCLIP14.5□□□□□ -0.09
VMP1-202ENST00000585847 RRP36Q96EU6 259 aaKnown RBP14.5□□□□□ -0.09
VMP1-202ENST00000585847 AIFM3Q96NN9 605 aa14.5□□□□□ -0.09
VMP1-202ENST00000585847 TRERF1Q96PN7 1200 aa14.5□□□□□ -0.09
VMP1-202ENST00000585847 AMNQ9BXJ7 453 aa14.5□□□□□ -0.09
VMP1-202ENST00000585847 FOXP1Q9H334 677 aaPredicted RBP14.5□□□□□ -0.09
VMP1-202ENST00000585847 RNF146Q9NTX7 359 aa14.5□□□□□ -0.09
VMP1-202ENST00000585847 PLXNA1Q9UIW2 1896 aa14.5□□□□□ -0.09
VMP1-202ENST00000585847 STXBP3O00186 592 aa14.49□□□□□ -0.09
VMP1-202ENST00000585847 ADAMTS3O15072 1205 aa14.49□□□□□ -0.09
VMP1-202ENST00000585847 SCG2P13521 617 aa14.49□□□□□ -0.09
VMP1-202ENST00000585847 NCLP19338 710 aaKnown RBP14.49□□□□□ -0.09
VMP1-202ENST00000585847 PTPREP23469 700 aa14.49□□□□□ -0.09
VMP1-202ENST00000585847 PSMC4P43686 418 aa14.49□□□□□ -0.09
VMP1-202ENST00000585847 PKP1Q13835 747 aa14.49□□□□□ -0.09
VMP1-202ENST00000585847 ARHGEF6Q15052 776 aa14.49□□□□□ -0.09
VMP1-202ENST00000585847 TKFCQ3LXA3 575 aa14.49□□□□□ -0.09
VMP1-202ENST00000585847 MORN1Q5T089 497 aa14.49□□□□□ -0.09
VMP1-202ENST00000585847 MCTP2Q6DN12 878 aa14.49□□□□□ -0.09
VMP1-202ENST00000585847 CHST13Q8NET6 341 aa14.49□□□□□ -0.09
VMP1-202ENST00000585847 USP6NLQ92738 828 aa14.49□□□□□ -0.09
VMP1-202ENST00000585847 TMEM106CQ9BVX2 250 aa14.49□□□□□ -0.09
VMP1-202ENST00000585847 MROH8Q9H579 483 aa14.49□□□□□ -0.09
VMP1-202ENST00000585847 HOMER2Q9NSB8 354 aa14.49□□□□□ -0.09
VMP1-202ENST00000585847 GABRQQ9UN88 632 aa14.49□□□□□ -0.09
VMP1-202ENST00000585847 CTDP1Q9Y5B0 961 aaPredicted RBP14.49□□□□□ -0.09
VMP1-202ENST00000585847 MORC2Q9Y6X9 1032 aaPredicted RBP14.49□□□□□ -0.09
VMP1-202ENST00000585847 ABCB11O95342 1321 aa14.48□□□□□ -0.09
VMP1-202ENST00000585847 BMP15O95972 392 aa14.48□□□□□ -0.09
VMP1-202ENST00000585847 MMP1P03956 469 aa14.48□□□□□ -0.09
VMP1-202ENST00000585847 U2AF2P26368 475 aaKnown RBP eCLIP14.48□□□□□ -0.09
VMP1-202ENST00000585847 MAPK4P31152 587 aa14.48□□□□□ -0.09
VMP1-202ENST00000585847 CCNA1P78396 465 aa14.48□□□□□ -0.09
VMP1-202ENST00000585847 GHRHRQ02643 423 aa14.48□□□□□ -0.09
VMP1-202ENST00000585847 RESTQ13127 1097 aa14.48□□□□□ -0.09
VMP1-202ENST00000585847 GNL2Q13823 731 aaKnown RBP14.48□□□□□ -0.09
VMP1-202ENST00000585847 GRB14Q14449 540 aa14.48□□□□□ -0.09
VMP1-202ENST00000585847 PLEKHH3Q7Z736 793 aa14.48□□□□□ -0.09
VMP1-202ENST00000585847 BICD2Q8TD16 824 aa14.48□□□□□ -0.09
VMP1-202ENST00000585847 FGD4Q96M96 766 aa14.48□□□□□ -0.09
VMP1-202ENST00000585847 A1CFQ9NQ94 594 aaKnown RBP14.48□□□□□ -0.09
VMP1-202ENST00000585847 PCDHA1Q9Y5I3 950 aa14.48□□□□□ -0.09
VMP1-202ENST00000585847 HTTP42858 3142 aa14.47□□□□□ -0.09
VMP1-202ENST00000585847 DNAJC25-GNG10A0A024R161 153 aa14.47□□□□□ -0.09
VMP1-202ENST00000585847 ESYT2A0FGR8 921 aa14.47□□□□□ -0.09
VMP1-202ENST00000585847 COBLO75128 1261 aa14.47□□□□□ -0.09
VMP1-202ENST00000585847 COPB2P35606 906 aa14.47□□□□□ -0.09
VMP1-202ENST00000585847 FCGRTP55899 365 aa14.47□□□□□ -0.09
VMP1-202ENST00000585847 HABP4Q5JVS0 413 aaKnown RBP14.47□□□□□ -0.09
VMP1-202ENST00000585847 KRT40Q6A162 431 aa14.47□□□□□ -0.09
VMP1-202ENST00000585847 DAGLBQ8NCG7 672 aa14.47□□□□□ -0.09
VMP1-202ENST00000585847 PURBQ96QR8 312 aaKnown RBP14.47□□□□□ -0.09
VMP1-202ENST00000585847 ACAD9Q9H845 621 aa14.47□□□□□ -0.09
VMP1-202ENST00000585847 GJB4Q9NTQ9 266 aa14.47□□□□□ -0.09
VMP1-202ENST00000585847 BARHL2Q9NY43 387 aa14.47□□□□□ -0.09
VMP1-202ENST00000585847 ASTN1O14525 1302 aa14.46□□□□□ -0.09
VMP1-202ENST00000585847 MCM3APO60318 1980 aa14.46□□□□□ -0.09
VMP1-202ENST00000585847 GNA11P29992 359 aa14.46□□□□□ -0.09
VMP1-202ENST00000585847 TRAPPC10P48553 1259 aa14.46□□□□□ -0.09
VMP1-202ENST00000585847 NPY5RQ15761 445 aa14.46□□□□□ -0.09
VMP1-202ENST00000585847 SLC9C1Q4G0N8 1177 aa14.46□□□□□ -0.09
VMP1-202ENST00000585847 RILPL1Q5EBL4 403 aa14.46□□□□□ -0.09
VMP1-202ENST00000585847 SLC30A10Q6XR72 485 aa14.46□□□□□ -0.09
VMP1-202ENST00000585847 HEATR3Q7Z4Q2 680 aa14.46□□□□□ -0.09
VMP1-202ENST00000585847 ABRAQ8N0Z2 381 aa14.46□□□□□ -0.09
VMP1-202ENST00000585847 NPLOC4Q8TAT6 608 aa14.46□□□□□ -0.09
VMP1-202ENST00000585847 ARMC5Q96C12 935 aa14.46□□□□□ -0.09
VMP1-202ENST00000585847 CYP39A1Q9NYL5 469 aa14.46□□□□□ -0.09
VMP1-202ENST00000585847 COL20A1Q9P218 1284 aa14.46□□□□□ -0.09
VMP1-202ENST00000585847 MRPL11Q9Y3B7 192 aaKnown RBP14.46□□□□□ -0.09
VMP1-202ENST00000585847 SLC15A5A6NIM6 579 aa14.45□□□□□ -0.1
VMP1-202ENST00000585847 MEIS2O14770 477 aa14.45□□□□□ -0.1
VMP1-202ENST00000585847 TNPO2O14787 897 aaKnown RBP14.45□□□□□ -0.1
VMP1-202ENST00000585847 YEATS4O95619 227 aa14.45□□□□□ -0.1
VMP1-202ENST00000585847 IGHA2P01877 340 aa14.45□□□□□ -0.1
VMP1-202ENST00000585847 EN2P19622 333 aaPredicted RBP14.45□□□□□ -0.1
VMP1-202ENST00000585847 ADORA2AP29274 412 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms