RNA–Protein interactions for RNA: ENST00000568519.5

NEIL1-219, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 771 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-219ENST00000568519 RNF26Q9BY78 433 aaPredicted RBP16.43■□□□□ 0.22
NEIL1-219ENST00000568519 TPCN1Q9ULQ1 816 aa16.43■□□□□ 0.22
NEIL1-219ENST00000568519 DNAJC25-GNG10A0A024R161 153 aa16.42■□□□□ 0.22
NEIL1-219ENST00000568519 A0A1W2PPC1 479 aa16.42■□□□□ 0.22
NEIL1-219ENST00000568519 CDKL5O76039 1030 aa16.42■□□□□ 0.22
NEIL1-219ENST00000568519 ALAS1P13196 640 aa16.42■□□□□ 0.22
NEIL1-219ENST00000568519 MNX1P50219 401 aaPredicted RBP16.42■□□□□ 0.22
NEIL1-219ENST00000568519 TRIM32Q13049 653 aa16.42■□□□□ 0.22
NEIL1-219ENST00000568519 NTRK3Q16288 839 aa16.42■□□□□ 0.22
NEIL1-219ENST00000568519 WDR78Q5VTH9 848 aa16.42■□□□□ 0.22
NEIL1-219ENST00000568519 MCF2L2Q86YR7 1114 aa16.42■□□□□ 0.22
NEIL1-219ENST00000568519 CCDC144CPQ8IYA2 1237 aa16.42■□□□□ 0.22
NEIL1-219ENST00000568519 MSL3Q8N5Y2 521 aaKnown RBP16.42■□□□□ 0.22
NEIL1-219ENST00000568519 SLKQ9H2G2 1235 aaPredicted RBP16.42■□□□□ 0.22
NEIL1-219ENST00000568519 VAT1LQ9HCJ6 419 aa16.42■□□□□ 0.22
NEIL1-219ENST00000568519 PAK6Q9NQU5 681 aaPredicted RBP16.42■□□□□ 0.22
NEIL1-219ENST00000568519 NAP1L2Q9ULW6 460 aaPredicted RBP16.42■□□□□ 0.22
NEIL1-219ENST00000568519 LIMCH1Q9UPQ0 1083 aa16.42■□□□□ 0.22
NEIL1-219ENST00000568519 ZNFX1Q9P2E3 1918 aaKnown RBP16.42■□□□□ 0.22
NEIL1-219ENST00000568519 PRPF3O43395 683 aaKnown RBP16.41■□□□□ 0.22
NEIL1-219ENST00000568519 ADORA2AP29274 412 aa16.41■□□□□ 0.22
NEIL1-219ENST00000568519 ADD1P35611 737 aaKnown RBP16.41■□□□□ 0.22
NEIL1-219ENST00000568519 OLFML2BQ68BL8 750 aa16.41■□□□□ 0.22
NEIL1-219ENST00000568519 PPP1R18Q6NYC8 613 aa16.41■□□□□ 0.22
NEIL1-219ENST00000568519 ZNF467Q7Z7K2 595 aaPredicted RBP16.41■□□□□ 0.22
NEIL1-219ENST00000568519 CLEC4DQ8WXI8 215 aa16.41■□□□□ 0.22
NEIL1-219ENST00000568519 CRISPLD2Q9H0B8 497 aa16.41■□□□□ 0.22
NEIL1-219ENST00000568519 SH2B1Q9NRF2 756 aaPredicted RBP16.41■□□□□ 0.22
NEIL1-219ENST00000568519 PCDHA1Q9Y5I3 950 aa16.41■□□□□ 0.22
NEIL1-219ENST00000568519 BAZ2BQ9UIF8 2168 aaKnown RBP16.4■□□□□ 0.22
NEIL1-219ENST00000568519 CPLX1O14810 134 aa16.4■□□□□ 0.22
NEIL1-219ENST00000568519 PPP1R11O60927 126 aaPredicted RBP16.4■□□□□ 0.22
NEIL1-219ENST00000568519 IGHA2P01877 340 aa16.4■□□□□ 0.22
NEIL1-219ENST00000568519 SNAP25P60880 206 aa16.4■□□□□ 0.22
NEIL1-219ENST00000568519 ZNF792Q3KQV3 632 aa16.4■□□□□ 0.22
NEIL1-219ENST00000568519 HOMER1Q86YM7 354 aa16.4■□□□□ 0.22
NEIL1-219ENST00000568519 RAB11FIP4Q86YS3 637 aa16.4■□□□□ 0.22
NEIL1-219ENST00000568519 TRIM22Q8IYM9 498 aa16.4■□□□□ 0.22
NEIL1-219ENST00000568519 ANKRD35Q8N283 1001 aa16.4■□□□□ 0.22
NEIL1-219ENST00000568519 GTF3C6Q969F1 213 aa16.4■□□□□ 0.22
NEIL1-219ENST00000568519 COL25A1Q9BXS0 654 aaPredicted RBP16.4■□□□□ 0.22
NEIL1-219ENST00000568519 A1CFQ9NQ94 594 aaKnown RBP16.4■□□□□ 0.22
NEIL1-219ENST00000568519 STK36Q9NRP7 1315 aa16.4■□□□□ 0.22
NEIL1-219ENST00000568519 VCANP13611 3396 aa16.4■□□□□ 0.22
NEIL1-219ENST00000568519 PLXNA1Q9UIW2 1896 aa16.39■□□□□ 0.22
NEIL1-219ENST00000568519 EYSQ5T1H1 3165 aa16.39■□□□□ 0.21
NEIL1-219ENST00000568519 DPP9Q86TI2 863 aa16.39■□□□□ 0.21
NEIL1-219ENST00000568519 DDX11Q96FC9 970 aa16.39■□□□□ 0.21
NEIL1-219ENST00000568519 GLT8D2Q9H1C3 349 aa16.39■□□□□ 0.21
NEIL1-219ENST00000568519 HOMER2Q9NSB8 354 aa16.39■□□□□ 0.21
NEIL1-219ENST00000568519 MTMR10Q9NXD2 777 aa16.39■□□□□ 0.21
NEIL1-219ENST00000568519 CYP39A1Q9NYL5 469 aa16.39■□□□□ 0.21
NEIL1-219ENST00000568519 NRBP1Q9UHY1 535 aa16.39■□□□□ 0.21
NEIL1-219ENST00000568519 SMCHD1A6NHR9 2005 aa16.39■□□□□ 0.21
NEIL1-219ENST00000568519 MAGEA10P43363 369 aaPredicted RBP16.38■□□□□ 0.21
NEIL1-219ENST00000568519 HSD17B4P51659 736 aa16.38■□□□□ 0.21
NEIL1-219ENST00000568519 AKAP17AQ02040 695 aaKnown RBP16.38■□□□□ 0.21
NEIL1-219ENST00000568519 SCRN1Q12765 414 aa16.38■□□□□ 0.21
NEIL1-219ENST00000568519 ME3Q16798 604 aa16.38■□□□□ 0.21
NEIL1-219ENST00000568519 PFKFB3Q16875 520 aaPredicted RBP16.38■□□□□ 0.21
NEIL1-219ENST00000568519 USH1GQ495M9 461 aa16.38■□□□□ 0.21
NEIL1-219ENST00000568519 MUM1L1Q5H9M0 696 aa16.38■□□□□ 0.21
NEIL1-219ENST00000568519 MAMDC4Q6UXC1 1216 aa16.38■□□□□ 0.21
NEIL1-219ENST00000568519 RNF207Q6ZRF8 634 aa16.38■□□□□ 0.21
NEIL1-219ENST00000568519 CMTR1Q8N1G2 835 aaKnown RBP16.38■□□□□ 0.21
NEIL1-219ENST00000568519 FAM133AQ8N9E0 248 aa16.38■□□□□ 0.21
NEIL1-219ENST00000568519 CCDC12Q8WUD4 166 aaPredicted RBP16.38■□□□□ 0.21
NEIL1-219ENST00000568519 LLPHQ9BRT6 129 aaKnown RBP16.38■□□□□ 0.21
NEIL1-219ENST00000568519 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.38■□□□□ 0.21
NEIL1-219ENST00000568519 V9GY48 417 aaPredicted RBP16.38■□□□□ 0.21
NEIL1-219ENST00000568519 SPTBN5Q9NRC6 3674 aaKnown RBP16.37■□□□□ 0.21
NEIL1-219ENST00000568519 ESYT2A0FGR8 921 aa16.37■□□□□ 0.21
NEIL1-219ENST00000568519 POTEB2H3BUK9 544 aa16.37■□□□□ 0.21
NEIL1-219ENST00000568519 PIK3CDO00329 1044 aa16.37■□□□□ 0.21
NEIL1-219ENST00000568519 NFIBO00712 420 aa16.37■□□□□ 0.21
NEIL1-219ENST00000568519 COBLO75128 1261 aa16.37■□□□□ 0.21
NEIL1-219ENST00000568519 DEXIO95424 95 aa16.37■□□□□ 0.21
NEIL1-219ENST00000568519 HMGCRP04035 888 aa16.37■□□□□ 0.21
NEIL1-219ENST00000568519 SCG2P13521 617 aa16.37■□□□□ 0.21
NEIL1-219ENST00000568519 CAPN2P17655 700 aa16.37■□□□□ 0.21
NEIL1-219ENST00000568519 CCT2P78371 535 aaKnown RBP16.37■□□□□ 0.21
NEIL1-219ENST00000568519 NECAB2Q7Z6G3 386 aa16.37■□□□□ 0.21
NEIL1-219ENST00000568519 DNERQ8NFT8 737 aa16.37■□□□□ 0.21
NEIL1-219ENST00000568519 MAML3Q96JK9 1138 aa16.37■□□□□ 0.21
NEIL1-219ENST00000568519 NCOA5Q9HCD5 579 aaKnown RBP16.37■□□□□ 0.21
NEIL1-219ENST00000568519 SH3GLB2Q9NR46 395 aa16.37■□□□□ 0.21
NEIL1-219ENST00000568519 BARHL2Q9NY43 387 aa16.37■□□□□ 0.21
NEIL1-219ENST00000568519 ADD3Q9UEY8 706 aaKnown RBP16.37■□□□□ 0.21
NEIL1-219ENST00000568519 SYNGAP1Q96PV0 1343 aa16.37■□□□□ 0.21
NEIL1-219ENST00000568519 B4DLN1 442 aa16.36■□□□□ 0.21
NEIL1-219ENST00000568519 OPLAHO14841 1288 aa16.36■□□□□ 0.21
NEIL1-219ENST00000568519 BMP8BP34820 402 aa16.36■□□□□ 0.21
NEIL1-219ENST00000568519 SLC4A3P48751 1232 aa16.36■□□□□ 0.21
NEIL1-219ENST00000568519 MRPL12P52815 198 aaKnown RBP16.36■□□□□ 0.21
NEIL1-219ENST00000568519 SSRP1Q08945 709 aaKnown RBP16.36■□□□□ 0.21
NEIL1-219ENST00000568519 NSMFQ6X4W1 530 aa16.36■□□□□ 0.21
NEIL1-219ENST00000568519 CCDC82Q8N4S0 544 aa16.36■□□□□ 0.21
NEIL1-219ENST00000568519 MPHOSPH6Q99547 160 aaKnown RBP16.36■□□□□ 0.21
NEIL1-219ENST00000568519 STXBP5LQ9Y2K9 1186 aa16.36■□□□□ 0.21
NEIL1-219ENST00000568519 DNAH12Q6ZR08 3092 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms