RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 KLHL10Q6JEL2 608 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 SPATC1Q76KD6 591 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.5□□□□□ -1.85
CHD9-216ENST00000565803 SPATA5Q8NB90 893 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 MNS1Q8NEH6 495 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 ANKK1Q8NFD2 765 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 PPP1R14AQ96A00 147 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 MFSD3Q96ES6 412 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 RADILQ96JH8 1075 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 FAM210AQ96ND0 272 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 MCOLN1Q9GZU1 580 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 IFT80Q9P2H3 777 aaPredicted RBP3.5□□□□□ -1.85
CHD9-216ENST00000565803 GPSM3Q9Y4H4 160 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 WDR17Q8IZU2 1322 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 GPRASP1Q5JY77 1395 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 TMEM238LA0A1B0GVL6 79 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 SNUPNO95149 360 aaKnown RBP3.5□□□□□ -1.85
CHD9-216ENST00000565803 MTHFD1P11586 935 aaKnown RBP3.5□□□□□ -1.85
CHD9-216ENST00000565803 GJA8P48165 433 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 YARSP54577 528 aaKnown RBP3.5□□□□□ -1.85
CHD9-216ENST00000565803 ORC1Q13415 861 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 CBX2Q14781 532 aaPredicted RBP3.5□□□□□ -1.85
CHD9-216ENST00000565803 TAF1CQ15572 869 aaPredicted RBP3.5□□□□□ -1.85
CHD9-216ENST00000565803 ZC3H12AQ5D1E8 599 aaKnown RBP3.5□□□□□ -1.85
CHD9-216ENST00000565803 TTC39AQ5SRH9 613 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 HIBCHQ6NVY1 386 aaPredicted RBP3.5□□□□□ -1.85
CHD9-216ENST00000565803 CATIPQ7Z7H3 387 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 IQCF2Q8IXL9 164 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 CLIP3Q96DZ5 547 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 KCTD5Q9NXV2 234 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 FBXO10Q9UK96 956 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 CFAP45Q9UL16 551 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 ZBTB21Q9ULJ3 1066 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 JAG2Q9Y219 1238 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 SCN7AQ01118 1682 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 B4DLN1 442 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 FOXN3O00409 490 aaPredicted RBP3.49□□□□□ -1.85
CHD9-216ENST00000565803 MT-CO1P00395 513 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 CTSHP09668 335 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 GLULP15104 373 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 PAX7P23759 505 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 TMOD1P28289 359 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 STAT3P40763 770 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 FMR1Q06787 632 aaKnown RBP eCLIP3.49□□□□□ -1.85
CHD9-216ENST00000565803 GRM3Q14832 879 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 ABCB5Q2M3G0 1257 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 ANO4Q32M45 955 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 SLC45A4Q5BKX6 768 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 FKBP15Q5T1M5 1219 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 GALNT17Q6IS24 598 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 C4orf50Q6ZRC1 276 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 CATSPER4Q7RTX7 472 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 ANKRD13BQ86YJ7 626 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 MAGEB6Q8N7X4 407 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 GPKOWQ92917 476 aaPredicted RBP eCLIP3.49□□□□□ -1.851e-8■■■■■ 30.1
CHD9-216ENST00000565803 SNX27Q96L92 541 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 DMRTB1Q96MA1 342 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 RTFDC1Q9BY42 306 aaPredicted RBP3.49□□□□□ -1.85
CHD9-216ENST00000565803 ASPSCR1Q9BZE9 553 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 HCN4Q9Y3Q4 1203 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 ANKRD31Q8N7Z5 1873 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 GLTPD2A6NH11 291 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 MAP3K6O95382 1288 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 CNTFP26441 200 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 BCAMP50895 628 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 LBX1P52954 281 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 PPP2R3AQ06190 1150 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 ZBTB17Q13105 803 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 COL9A2Q14055 689 aaPredicted RBP3.49□□□□□ -1.85
CHD9-216ENST00000565803 MORC3Q14149 939 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 OCLNQ16625 522 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 UVSSAQ2YD98 709 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 KMT5BQ4FZB7 885 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 VPS53Q5VIR6 699 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 NUGGCQ68CJ6 796 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 PI16Q6UXB8 463 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 RUFY2Q8WXA3 655 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 TTC14Q96N46 770 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 IPO9Q96P70 1041 aaKnown RBP3.49□□□□□ -1.85
CHD9-216ENST00000565803 CDH19Q9H159 772 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 ZCCHC17Q9NP64 241 aaKnown RBP3.49□□□□□ -1.85
CHD9-216ENST00000565803 LRRC4BQ9NT99 713 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 UBP1Q9NZI7 540 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 TRHDEQ9UKU6 1024 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 DGKBQ9Y6T7 804 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 AKAP11Q9UKA4 1901 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 MAP3K19Q56UN5 1328 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 ARPC4-TTLL3A0A0A6YYG9 625 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 TOR1BO14657 336 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 FOXO3O43524 673 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 TMCC2O75069 709 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 CHGBP05060 677 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 CCT5P48643 541 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 LLGL1Q15334 1064 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 FXNQ16595 210 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 FAM102BQ5T8I3 360 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 LVRNQ6Q4G3 990 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 BLOC1S3Q6QNY0 202 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 UNC5DQ6UXZ4 953 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 BNC2Q6ZN30 1099 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms