RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 YOD1Q5VVQ6 348 aaPredicted RBP6.49□□□□□ -1.37
PALB2-203ENST00000565038 BICRALQ6AI39 1079 aa6.49□□□□□ -1.37
PALB2-203ENST00000565038 IRF2BP1Q8IU81 584 aa6.49□□□□□ -1.37
PALB2-203ENST00000565038 CCDC103Q8IW40 242 aa6.49□□□□□ -1.37
PALB2-203ENST00000565038 LRRC47Q8N1G4 583 aaKnown RBP6.49□□□□□ -1.37
PALB2-203ENST00000565038 CCDC140Q96MF4 163 aa6.49□□□□□ -1.37
PALB2-203ENST00000565038 AARSD1Q9BTE6 412 aaKnown RBP6.49□□□□□ -1.37
PALB2-203ENST00000565038 PDLIM7Q9NR12 457 aa6.49□□□□□ -1.37
PALB2-203ENST00000565038 BTG4Q9NY30 223 aa6.49□□□□□ -1.37
PALB2-203ENST00000565038 TRBV23OR9-2A0A075B6M9 112 aa6.48□□□□□ -1.37
PALB2-203ENST00000565038 OR14I1A6ND48 311 aa6.48□□□□□ -1.37
PALB2-203ENST00000565038 NUDT19A8MXV4 375 aa6.48□□□□□ -1.37
PALB2-203ENST00000565038 DLX3O60479 287 aa6.48□□□□□ -1.37
PALB2-203ENST00000565038 NPHS1O60500 1241 aa6.48□□□□□ -1.37
PALB2-203ENST00000565038 CPP00450 1065 aa6.48□□□□□ -1.37
PALB2-203ENST00000565038 MESP2Q0VG99 397 aa6.48□□□□□ -1.37
PALB2-203ENST00000565038 IFRD2Q12894 506 aaPredicted RBP6.48□□□□□ -1.37
PALB2-203ENST00000565038 UBXN4Q92575 508 aa6.48□□□□□ -1.37
PALB2-203ENST00000565038 MMP19Q99542 508 aa6.48□□□□□ -1.37
PALB2-203ENST00000565038 DNAJC7Q99615 494 aa6.48□□□□□ -1.37
PALB2-203ENST00000565038 OSBPL2Q9H1P3 480 aa6.48□□□□□ -1.37
PALB2-203ENST00000565038 FBLN5Q9UBX5 448 aa6.48□□□□□ -1.37
PALB2-203ENST00000565038 MEFVO15553 781 aaPredicted RBP6.47□□□□□ -1.37
PALB2-203ENST00000565038 FARP2O94887 1054 aaPredicted RBP6.47□□□□□ -1.37
PALB2-203ENST00000565038 MPOP05164 745 aa6.47□□□□□ -1.37
PALB2-203ENST00000565038 TXKP42681 527 aa6.47□□□□□ -1.37
PALB2-203ENST00000565038 ERVFRD-1P60508 538 aa6.47□□□□□ -1.37
PALB2-203ENST00000565038 BMS1Q14692 1282 aaKnown RBP6.47□□□□□ -1.37
PALB2-203ENST00000565038 RAB3GAP1Q15042 981 aa6.47□□□□□ -1.37
PALB2-203ENST00000565038 PPIL6Q8IXY8 311 aa6.47□□□□□ -1.37
PALB2-203ENST00000565038 LZTR1Q8N653 840 aa6.47□□□□□ -1.37
PALB2-203ENST00000565038 NLGN2Q8NFZ4 835 aa6.47□□□□□ -1.37
PALB2-203ENST00000565038 KCTD13Q8WZ19 329 aa6.47□□□□□ -1.37
PALB2-203ENST00000565038 DPF3Q92784 378 aa6.47□□□□□ -1.37
PALB2-203ENST00000565038 DIO2Q92813 273 aa6.47□□□□□ -1.37
PALB2-203ENST00000565038 OSBP2Q969R2 916 aa6.47□□□□□ -1.37
PALB2-203ENST00000565038 ZNF669Q96BR6 464 aaPredicted RBP6.47□□□□□ -1.37
PALB2-203ENST00000565038 C1orf159Q96HA4 380 aa6.47□□□□□ -1.37
PALB2-203ENST00000565038 ZNF552Q9H707 407 aaPredicted RBP6.47□□□□□ -1.37
PALB2-203ENST00000565038 TNFRSF12AQ9NP84 129 aa6.47□□□□□ -1.37
PALB2-203ENST00000565038 KDM2BQ8NHM5 1336 aa6.47□□□□□ -1.37
PALB2-203ENST00000565038 TRAV20A0A0B4J274 112 aa6.46□□□□□ -1.38
PALB2-203ENST00000565038 MYOCOSA0A1B0GUC4 107 aa6.46□□□□□ -1.38
PALB2-203ENST00000565038 ADCY3O60266 1144 aa6.46□□□□□ -1.38
PALB2-203ENST00000565038 FUCA1P04066 466 aa6.46□□□□□ -1.38
PALB2-203ENST00000565038 FAM153BP0C7A2 387 aa6.46□□□□□ -1.38
PALB2-203ENST00000565038 PABPC1P11940 636 aaKnown RBP6.46□□□□□ -1.38
PALB2-203ENST00000565038 LCP1P13796 627 aa6.46□□□□□ -1.38
PALB2-203ENST00000565038 CORO7P57737 925 aa6.46□□□□□ -1.38
PALB2-203ENST00000565038 MAP4K2Q12851 820 aa6.46□□□□□ -1.38
PALB2-203ENST00000565038 SLC35F1Q5T1Q4 408 aa6.46□□□□□ -1.38
PALB2-203ENST00000565038 NSMFQ6X4W1 530 aa6.46□□□□□ -1.38
PALB2-203ENST00000565038 SYDE1Q6ZW31 735 aaPredicted RBP6.46□□□□□ -1.38
PALB2-203ENST00000565038 USP53Q70EK8 1073 aa6.46□□□□□ -1.38
PALB2-203ENST00000565038 LRP10Q7Z4F1 713 aa6.46□□□□□ -1.38
PALB2-203ENST00000565038 POU5F2Q8N7G0 328 aa6.46□□□□□ -1.38
PALB2-203ENST00000565038 FBXO15Q8NCQ5 510 aaPredicted RBP6.46□□□□□ -1.38
PALB2-203ENST00000565038 USP33Q8TEY7 942 aa6.46□□□□□ -1.38
PALB2-203ENST00000565038 MKL1Q969V6 931 aa6.46□□□□□ -1.38
PALB2-203ENST00000565038 MTA3Q9BTC8 594 aa6.46□□□□□ -1.38
PALB2-203ENST00000565038 LNPKQ9C0E8 428 aa6.46□□□□□ -1.38
PALB2-203ENST00000565038 MCOLN1Q9GZU1 580 aa6.46□□□□□ -1.38
PALB2-203ENST00000565038 RXFP1Q9HBX9 757 aa6.46□□□□□ -1.38
PALB2-203ENST00000565038 BLACEA4D250 179 aa6.45□□□□□ -1.38
PALB2-203ENST00000565038 FGFR1P11362 822 aa6.45□□□□□ -1.38
PALB2-203ENST00000565038 VIPR1P32241 457 aa6.45□□□□□ -1.38
PALB2-203ENST00000565038 FOXB2Q5VYV0 432 aa6.45□□□□□ -1.38
PALB2-203ENST00000565038 E4F1Q66K89 784 aaPredicted RBP6.45□□□□□ -1.38
PALB2-203ENST00000565038 IQCEQ6IPM2 695 aa6.45□□□□□ -1.38
PALB2-203ENST00000565038 RPTNQ6XPR3 784 aa6.45□□□□□ -1.38
PALB2-203ENST00000565038 RCBTB1Q8NDN9 531 aa6.45□□□□□ -1.38
PALB2-203ENST00000565038 FAM84AQ96KN4 292 aa6.45□□□□□ -1.38
PALB2-203ENST00000565038 KRTAP4-8Q9BYQ9 185 aa6.45□□□□□ -1.38
PALB2-203ENST00000565038 ZSWIM4Q9H7M6 989 aa6.45□□□□□ -1.38
PALB2-203ENST00000565038 MARCH2Q9P0N8 246 aa6.45□□□□□ -1.38
PALB2-203ENST00000565038 KLHL14Q9P2G3 628 aa6.45□□□□□ -1.38
PALB2-203ENST00000565038 CDK11AQ9UQ88 783 aaPredicted RBP6.45□□□□□ -1.38
PALB2-203ENST00000565038 ZC3H12DA2A288 527 aaKnown RBP6.44□□□□□ -1.38
PALB2-203ENST00000565038 DBHP09172 617 aa6.44□□□□□ -1.38
PALB2-203ENST00000565038 LTBRP36941 435 aa6.44□□□□□ -1.38
PALB2-203ENST00000565038 SRSF3P84103 164 aaKnown RBP6.44□□□□□ -1.38
PALB2-203ENST00000565038 KCNAB2Q13303 367 aa6.44□□□□□ -1.38
PALB2-203ENST00000565038 ZNF124Q15973 351 aa6.44□□□□□ -1.38
PALB2-203ENST00000565038 CCDC144BQ3MJ40 725 aa6.44□□□□□ -1.38
PALB2-203ENST00000565038 FAM209AQ5JX71 171 aa6.44□□□□□ -1.38
PALB2-203ENST00000565038 ACBD5Q5T8D3 534 aaPredicted RBP6.44□□□□□ -1.38
PALB2-203ENST00000565038 TMEM132EQ6IEE7 984 aa6.44□□□□□ -1.38
PALB2-203ENST00000565038 TEX2Q8IWB9 1127 aa6.44□□□□□ -1.38
PALB2-203ENST00000565038 ZBTB38Q8NAP3 1195 aaPredicted RBP6.44□□□□□ -1.38
PALB2-203ENST00000565038 KCNN1Q92952 543 aa6.44□□□□□ -1.38
PALB2-203ENST00000565038 CDC6Q99741 560 aa6.44□□□□□ -1.38
PALB2-203ENST00000565038 SGPP1Q9BX95 441 aa6.44□□□□□ -1.38
PALB2-203ENST00000565038 FBXL7Q9UJT9 491 aa6.44□□□□□ -1.38
PALB2-203ENST00000565038 PCDHA2Q9Y5H9 948 aa6.44□□□□□ -1.38
PALB2-203ENST00000565038 TIMM13Q9Y5L4 95 aaPredicted RBP6.44□□□□□ -1.38
PALB2-203ENST00000565038 HCFC2Q9Y5Z7 792 aa6.44□□□□□ -1.38
PALB2-203ENST00000565038 F8W031 263 aaPredicted RBP6.43□□□□□ -1.38
PALB2-203ENST00000565038 GLI4P10075 376 aa6.43□□□□□ -1.38
PALB2-203ENST00000565038 FPR2P25090 351 aa6.43□□□□□ -1.38
PALB2-203ENST00000565038 BCL6P41182 706 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms