RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 ALAS1P13196 640 aa14.97□□□□□ -0.01
PSEN1-221ENST00000557293 NBPF20Q3BBV1 942 aa14.97□□□□□ -0.01
PSEN1-221ENST00000557293 ZNF444Q8N0Y2 327 aaPredicted RBP14.97□□□□□ -0.01
PSEN1-221ENST00000557293 NEDD1Q8NHV4 660 aa14.97□□□□□ -0.01
PSEN1-221ENST00000557293 VTA1Q9NP79 307 aa14.97□□□□□ -0.01
PSEN1-221ENST00000557293 LCTP09848 1927 aa14.97□□□□□ -0.01
PSEN1-221ENST00000557293 ACTN1P12814 892 aa14.96□□□□□ -0.01
PSEN1-221ENST00000557293 RFC2P35250 354 aa14.96□□□□□ -0.01
PSEN1-221ENST00000557293 ZSCAN25Q6NSZ9 544 aa14.96□□□□□ -0.01
PSEN1-221ENST00000557293 FAM160B2Q86V87 743 aa14.96□□□□□ -0.01
PSEN1-221ENST00000557293 CHURC1Q8WUH1 139 aa14.96□□□□□ -0.01
PSEN1-221ENST00000557293 CHMP4CQ96CF2 233 aa14.96□□□□□ -0.01
PSEN1-221ENST00000557293 GMCL1Q96IK5 515 aa14.96□□□□□ -0.01
PSEN1-221ENST00000557293 POLR3EQ9NVU0 708 aa14.96□□□□□ -0.01
PSEN1-221ENST00000557293 LMCD1Q9NZU5 365 aa14.96□□□□□ -0.01
PSEN1-221ENST00000557293 MYH7P12883 1935 aa14.96□□□□□ -0.02
PSEN1-221ENST00000557293 PTPRSQ13332 1948 aa14.96□□□□□ -0.02
PSEN1-221ENST00000557293 BRWD1Q9NSI6 2320 aa14.95□□□□□ -0.02
PSEN1-221ENST00000557293 SCN10AQ9Y5Y9 1956 aa14.95□□□□□ -0.02
PSEN1-221ENST00000557293 PITPNM1O00562 1244 aa14.95□□□□□ -0.02
PSEN1-221ENST00000557293 MYL3P08590 195 aa14.95□□□□□ -0.02
PSEN1-221ENST00000557293 MCCP23508 829 aa14.95□□□□□ -0.02
PSEN1-221ENST00000557293 STAT2P52630 851 aa14.95□□□□□ -0.02
PSEN1-221ENST00000557293 TMCO2Q7Z6W1 182 aaPredicted RBP14.95□□□□□ -0.02
PSEN1-221ENST00000557293 FAM178BQ8IXR5 827 aa14.95□□□□□ -0.02
PSEN1-221ENST00000557293 CTAGE1Q96RT6 745 aa14.95□□□□□ -0.02
PSEN1-221ENST00000557293 WDR11Q9BZH6 1224 aa14.95□□□□□ -0.02
PSEN1-221ENST00000557293 KIF28PB7ZC32 967 aa14.94□□□□□ -0.02
PSEN1-221ENST00000557293 CCER2I3L3R5 266 aa14.94□□□□□ -0.02
PSEN1-221ENST00000557293 BAATQ14032 418 aaPredicted RBP14.94□□□□□ -0.02
PSEN1-221ENST00000557293 TCTN1Q2MV58 587 aa14.94□□□□□ -0.02
PSEN1-221ENST00000557293 RCSD1Q6JBY9 416 aa14.94□□□□□ -0.02
PSEN1-221ENST00000557293 NSMFQ6X4W1 530 aa14.94□□□□□ -0.02
PSEN1-221ENST00000557293 KCTD1Q719H9 257 aa14.94□□□□□ -0.02
PSEN1-221ENST00000557293 RASGRP2Q7LDG7 609 aa14.94□□□□□ -0.02
PSEN1-221ENST00000557293 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.94□□□□□ -0.02
PSEN1-221ENST00000557293 MTG1Q9BT17 334 aaPredicted RBP14.94□□□□□ -0.02
PSEN1-221ENST00000557293 SUGCTQ9HAC7 445 aa14.94□□□□□ -0.02
PSEN1-221ENST00000557293 ZBTB40Q9NUA8 1239 aa14.94□□□□□ -0.02
PSEN1-221ENST00000557293 PRR12Q9ULL5 1215 aa14.94□□□□□ -0.02
PSEN1-221ENST00000557293 PLIN4Q96Q06 1357 aa14.94□□□□□ -0.02
PSEN1-221ENST00000557293 PRR33A8MZF0 331 aa14.93□□□□□ -0.02
PSEN1-221ENST00000557293 TFAP4Q01664 338 aa14.93□□□□□ -0.02
PSEN1-221ENST00000557293 NFRKBQ6P4R8 1299 aa14.93□□□□□ -0.02
PSEN1-221ENST00000557293 IFNL3Q8IZI9 196 aa14.93□□□□□ -0.02
PSEN1-221ENST00000557293 RETREG2Q8NC44 543 aa14.93□□□□□ -0.02
PSEN1-221ENST00000557293 GDPD5Q8WTR4 605 aa14.93□□□□□ -0.02
PSEN1-221ENST00000557293 COPS5Q92905 334 aa14.93□□□□□ -0.02
PSEN1-221ENST00000557293 FTOQ9C0B1 505 aaKnown RBP eCLIP14.93□□□□□ -0.02
PSEN1-221ENST00000557293 A6NJR5 290 aa14.92□□□□□ -0.02
PSEN1-221ENST00000557293 PATL2C9JE40 543 aaKnown RBP14.92□□□□□ -0.02
PSEN1-221ENST00000557293 M0R2C6 588 aa14.92□□□□□ -0.02
PSEN1-221ENST00000557293 GPAA1O43292 621 aa14.92□□□□□ -0.02
PSEN1-221ENST00000557293 SLC1A4P43007 532 aa14.92□□□□□ -0.02
PSEN1-221ENST00000557293 ALDH5A1P51649 535 aaPredicted RBP14.92□□□□□ -0.02
PSEN1-221ENST00000557293 WDR5P61964 334 aaKnown RBP14.92□□□□□ -0.02
PSEN1-221ENST00000557293 PTPN11Q06124 597 aaPredicted RBP14.92□□□□□ -0.02
PSEN1-221ENST00000557293 LEXMQ3ZCV2 418 aa14.92□□□□□ -0.02
PSEN1-221ENST00000557293 FAM47CQ5HY64 1035 aa14.92□□□□□ -0.02
PSEN1-221ENST00000557293 GJD3Q8N144 294 aa14.92□□□□□ -0.02
PSEN1-221ENST00000557293 KBTBD3Q8NAB2 608 aa14.92□□□□□ -0.02
PSEN1-221ENST00000557293 APPBP2Q92624 585 aa14.92□□□□□ -0.02
PSEN1-221ENST00000557293 UBE2ZQ9H832 354 aaPredicted RBP14.92□□□□□ -0.02
PSEN1-221ENST00000557293 IL17RBQ9NRM6 502 aa14.92□□□□□ -0.02
PSEN1-221ENST00000557293 RNF113AO15541 343 aaKnown RBP14.91□□□□□ -0.02
PSEN1-221ENST00000557293 SMARCA5O60264 1052 aaPredicted RBP14.91□□□□□ -0.02
PSEN1-221ENST00000557293 BAIAP3O94812 1187 aa14.91□□□□□ -0.02
PSEN1-221ENST00000557293 ICAM1P05362 532 aa14.91□□□□□ -0.02
PSEN1-221ENST00000557293 MRE11P49959 708 aa14.91□□□□□ -0.02
PSEN1-221ENST00000557293 CPT1AP50416 773 aa14.91□□□□□ -0.02
PSEN1-221ENST00000557293 ERVK-21P61565 698 aa14.91□□□□□ -0.02
PSEN1-221ENST00000557293 DEFB103AP81534 67 aa14.91□□□□□ -0.02
PSEN1-221ENST00000557293 OR6J1Q8NGC5 347 aa14.91□□□□□ -0.02
PSEN1-221ENST00000557293 INCENPQ9NQS7 918 aa14.91□□□□□ -0.02
PSEN1-221ENST00000557293 TRIP12Q14669 1992 aaPredicted RBP14.91□□□□□ -0.02
PSEN1-221ENST00000557293 COL4A4P53420 1690 aaPredicted RBP14.9□□□□□ -0.02
PSEN1-221ENST00000557293 LOC102724159A0A0B4J2E5 919 aa14.9□□□□□ -0.02
PSEN1-221ENST00000557293 POTEB3A0JP26 581 aa14.9□□□□□ -0.02
PSEN1-221ENST00000557293 NFIBO00712 420 aa14.9□□□□□ -0.02
PSEN1-221ENST00000557293 HMMRO75330 724 aa14.9□□□□□ -0.02
PSEN1-221ENST00000557293 TSPY3P0CV98 308 aa14.9□□□□□ -0.02
PSEN1-221ENST00000557293 TSPY8P0CW00 308 aa14.9□□□□□ -0.02
PSEN1-221ENST00000557293 IL9P15248 144 aa14.9□□□□□ -0.02
PSEN1-221ENST00000557293 NOVP48745 357 aa14.9□□□□□ -0.02
PSEN1-221ENST00000557293 TDO2P48775 406 aa14.9□□□□□ -0.02
PSEN1-221ENST00000557293 IKQ13123 557 aaPredicted RBP14.9□□□□□ -0.02
PSEN1-221ENST00000557293 BFSP2Q13515 415 aa14.9□□□□□ -0.02
PSEN1-221ENST00000557293 PWP2Q15269 919 aaKnown RBP14.9□□□□□ -0.02
PSEN1-221ENST00000557293 TTBK2Q6IQ55 1244 aa14.9□□□□□ -0.02
PSEN1-221ENST00000557293 POTEBQ6S5H4 581 aa14.9□□□□□ -0.02
PSEN1-221ENST00000557293 CLEC4DQ8WXI8 215 aa14.9□□□□□ -0.02
PSEN1-221ENST00000557293 DHX38Q92620 1227 aaKnown RBP14.9□□□□□ -0.02
PSEN1-221ENST00000557293 SEC62Q99442 399 aaKnown RBP14.9□□□□□ -0.02
PSEN1-221ENST00000557293 ZNF287Q9HBT7 754 aa14.9□□□□□ -0.02
PSEN1-221ENST00000557293 GPHNQ9NQX3 736 aaPredicted RBP14.9□□□□□ -0.02
PSEN1-221ENST00000557293 CCPG1Q9ULG6 757 aa14.9□□□□□ -0.02
PSEN1-221ENST00000557293 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.9□□□□□ -0.02
PSEN1-221ENST00000557293 LINC01553A4QN01 128 aa14.89□□□□□ -0.03
PSEN1-221ENST00000557293 NMT2O60551 498 aa14.89□□□□□ -0.03
PSEN1-221ENST00000557293 KPNA6O60684 536 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms