RNA–Protein interactions for RNA: ENST00000557273.5

RDH11-209, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-209ENST00000557273 KIAA1211Q6ZU35 1233 aa11.96□□□□□ -0.49
RDH11-209ENST00000557273 OTOP2Q7RTS6 562 aa11.96□□□□□ -0.49
RDH11-209ENST00000557273 TICAM2Q86XR7 235 aa11.96□□□□□ -0.49
RDH11-209ENST00000557273 TRPV6Q9H1D0 765 aa11.96□□□□□ -0.49
RDH11-209ENST00000557273 NKX2-4Q9H2Z4 354 aa11.96□□□□□ -0.49
RDH11-209ENST00000557273 TCP11L1Q9NUJ3 509 aa11.96□□□□□ -0.49
RDH11-209ENST00000557273 POLR3EQ9NVU0 708 aa11.96□□□□□ -0.49
RDH11-209ENST00000557273 ISY1Q9ULR0 285 aaKnown RBP11.96□□□□□ -0.49
RDH11-209ENST00000557273 PCDHA11Q9Y5I1 949 aa11.96□□□□□ -0.49
RDH11-209ENST00000557273 BDP1A6H8Y1 2624 aa11.96□□□□□ -0.5
RDH11-209ENST00000557273 TET1Q8NFU7 2136 aa11.96□□□□□ -0.5
RDH11-209ENST00000557273 ZMYM6O95789 1325 aa11.95□□□□□ -0.5
RDH11-209ENST00000557273 NMT2O60551 498 aa11.95□□□□□ -0.5
RDH11-209ENST00000557273 POU3F3P20264 500 aaPredicted RBP11.95□□□□□ -0.5
RDH11-209ENST00000557273 PTGS1P23219 599 aa11.95□□□□□ -0.5
RDH11-209ENST00000557273 CPT1AP50416 773 aa11.95□□□□□ -0.5
RDH11-209ENST00000557273 CCL23P55773 120 aa11.95□□□□□ -0.5
RDH11-209ENST00000557273 PURAQ00577 322 aaKnown RBP11.95□□□□□ -0.5
RDH11-209ENST00000557273 NSMFQ6X4W1 530 aa11.95□□□□□ -0.5
RDH11-209ENST00000557273 EEPD1Q7L9B9 569 aa11.95□□□□□ -0.5
RDH11-209ENST00000557273 RASGRP2Q7LDG7 609 aa11.95□□□□□ -0.5
RDH11-209ENST00000557273 SLC4A7Q9Y6M7 1214 aa11.95□□□□□ -0.5
RDH11-209ENST00000557273 DDX49Q9Y6V7 483 aaKnown RBP11.95□□□□□ -0.5
RDH11-209ENST00000557273 TRIP12Q14669 1992 aaPredicted RBP11.94□□□□□ -0.5
RDH11-209ENST00000557273 TNKSO95271 1327 aa11.94□□□□□ -0.5
RDH11-209ENST00000557273 WDR19Q8NEZ3 1342 aa11.94□□□□□ -0.5
RDH11-209ENST00000557273 NKRFO15226 690 aaKnown RBP eCLIP11.94□□□□□ -0.5
RDH11-209ENST00000557273 EDNRBP24530 442 aa11.94□□□□□ -0.5
RDH11-209ENST00000557273 RFC2P35250 354 aa11.94□□□□□ -0.5
RDH11-209ENST00000557273 PSMC6P62333 389 aa11.94□□□□□ -0.5
RDH11-209ENST00000557273 CTDSPL2Q05D32 466 aa11.94□□□□□ -0.5
RDH11-209ENST00000557273 BAATQ14032 418 aaPredicted RBP11.94□□□□□ -0.5
RDH11-209ENST00000557273 TMEM63BQ5T3F8 832 aa11.94□□□□□ -0.5
RDH11-209ENST00000557273 SYDE2Q5VT97 1194 aa11.94□□□□□ -0.5
RDH11-209ENST00000557273 OTUD7AQ8TE49 926 aaPredicted RBP11.94□□□□□ -0.5
RDH11-209ENST00000557273 ADAMTS19Q8TE59 1207 aa11.94□□□□□ -0.5
RDH11-209ENST00000557273 WDR11Q9BZH6 1224 aa11.94□□□□□ -0.5
RDH11-209ENST00000557273 MAF1Q9H063 256 aa11.94□□□□□ -0.5
RDH11-209ENST00000557273 HELLSQ9NRZ9 838 aa11.94□□□□□ -0.5
RDH11-209ENST00000557273 TRANK1O15050 2925 aa11.94□□□□□ -0.5
RDH11-209ENST00000557273 TCF20Q9UGU0 1960 aaKnown RBP11.94□□□□□ -0.5
RDH11-209ENST00000557273 KIAA1217Q5T5P2 1943 aa11.94□□□□□ -0.5
RDH11-209ENST00000557273 BRWD1Q9NSI6 2320 aa11.93□□□□□ -0.5
RDH11-209ENST00000557273 RAD50Q92878 1312 aa11.93□□□□□ -0.5
RDH11-209ENST00000557273 PITPNM1O00562 1244 aa11.93□□□□□ -0.5
RDH11-209ENST00000557273 NFIBO00712 420 aa11.93□□□□□ -0.5
RDH11-209ENST00000557273 RANBP6O60518 1105 aaKnown RBP11.93□□□□□ -0.5
RDH11-209ENST00000557273 KPNA6O60684 536 aa11.93□□□□□ -0.5
RDH11-209ENST00000557273 SNHG28P0DPA3 235 aa11.93□□□□□ -0.5
RDH11-209ENST00000557273 TOP1P11387 765 aaKnown RBP11.93□□□□□ -0.5
RDH11-209ENST00000557273 ATP2A2P16615 1042 aaKnown RBP11.93□□□□□ -0.5
RDH11-209ENST00000557273 IGFBP4P22692 258 aa11.93□□□□□ -0.5
RDH11-209ENST00000557273 SNAP25P60880 206 aa11.93□□□□□ -0.5
RDH11-209ENST00000557273 PTPN11Q06124 597 aaPredicted RBP11.93□□□□□ -0.5
RDH11-209ENST00000557273 CCDC96Q2M329 555 aa11.93□□□□□ -0.5
RDH11-209ENST00000557273 BRDTQ58F21 947 aaPredicted RBP11.93□□□□□ -0.5
RDH11-209ENST00000557273 VPS53Q5VIR6 699 aa11.93□□□□□ -0.5
RDH11-209ENST00000557273 PPP2R2DQ66LE6 453 aa11.93□□□□□ -0.5
RDH11-209ENST00000557273 TTBK2Q6IQ55 1244 aa11.93□□□□□ -0.5
RDH11-209ENST00000557273 NFRKBQ6P4R8 1299 aa11.93□□□□□ -0.5
RDH11-209ENST00000557273 DNERQ8NFT8 737 aa11.93□□□□□ -0.5
RDH11-209ENST00000557273 PHOSPHO2Q8TCD6 241 aa11.93□□□□□ -0.5
RDH11-209ENST00000557273 CLEC4DQ8WXI8 215 aa11.93□□□□□ -0.5
RDH11-209ENST00000557273 PPM1EQ8WY54 764 aa11.93□□□□□ -0.5
RDH11-209ENST00000557273 EVI5LQ96CN4 794 aa11.93□□□□□ -0.5
RDH11-209ENST00000557273 SCLYQ96I15 445 aa11.93□□□□□ -0.5
RDH11-209ENST00000557273 PURBQ96QR8 312 aaKnown RBP11.93□□□□□ -0.5
RDH11-209ENST00000557273 MTG1Q9BT17 334 aaPredicted RBP11.93□□□□□ -0.5
RDH11-209ENST00000557273 INCENPQ9NQS7 918 aa11.93□□□□□ -0.5
RDH11-209ENST00000557273 TRMT13Q9NUP7 481 aaKnown RBP11.93□□□□□ -0.5
RDH11-209ENST00000557273 PCDHB15Q9Y5E8 787 aa11.93□□□□□ -0.5
RDH11-209ENST00000557273 PTPRSQ13332 1948 aa11.93□□□□□ -0.5
RDH11-209ENST00000557273 A6NJR5 290 aa11.92□□□□□ -0.5
RDH11-209ENST00000557273 PDHBP11177 359 aa11.92□□□□□ -0.5
RDH11-209ENST00000557273 PCP11498 1178 aaKnown RBP11.92□□□□□ -0.5
RDH11-209ENST00000557273 COL9A1P20849 921 aa11.92□□□□□ -0.5
RDH11-209ENST00000557273 RABGGTBP53611 331 aa11.92□□□□□ -0.5
RDH11-209ENST00000557273 TTLL4Q14679 1199 aa11.92□□□□□ -0.5
RDH11-209ENST00000557273 SCFD2Q8WU76 684 aa11.92□□□□□ -0.5
RDH11-209ENST00000557273 TTC14Q96N46 770 aa11.92□□□□□ -0.5
RDH11-209ENST00000557273 SLC9A7Q96T83 725 aa11.92□□□□□ -0.5
RDH11-209ENST00000557273 UHRF1Q96T88 793 aaPredicted RBP11.92□□□□□ -0.5
RDH11-209ENST00000557273 MPHOSPH6Q99547 160 aaKnown RBP11.92□□□□□ -0.5
RDH11-209ENST00000557273 TMEM47Q9BQJ4 181 aa11.92□□□□□ -0.5
RDH11-209ENST00000557273 TSPYL2Q9H2G4 693 aaPredicted RBP11.92□□□□□ -0.5
RDH11-209ENST00000557273 LAMA4Q16363 1823 aa11.92□□□□□ -0.5
RDH11-209ENST00000557273 MYH6P13533 1939 aa11.92□□□□□ -0.5
RDH11-209ENST00000557273 PTPDC1A2A3K4 754 aa11.91□□□□□ -0.5
RDH11-209ENST00000557273 ZBBXA8MT70 800 aa11.91□□□□□ -0.5
RDH11-209ENST00000557273 FGAP02671 866 aa11.91□□□□□ -0.5
RDH11-209ENST00000557273 CYP2C9P11712 490 aa11.91□□□□□ -0.5
RDH11-209ENST00000557273 ACTN1P12814 892 aa11.91□□□□□ -0.5
RDH11-209ENST00000557273 MYOGP15173 224 aa11.91□□□□□ -0.5
RDH11-209ENST00000557273 SLC16A2P36021 539 aa11.91□□□□□ -0.5
RDH11-209ENST00000557273 NT5C2P49902 561 aa11.91□□□□□ -0.5
RDH11-209ENST00000557273 RPS6P62753 249 aaKnown RBP11.91□□□□□ -0.5
RDH11-209ENST00000557273 ZNF543Q08ER8 600 aa11.91□□□□□ -0.5
RDH11-209ENST00000557273 PPP2R5BQ15173 497 aa11.91□□□□□ -0.5
RDH11-209ENST00000557273 CCDC85BQ15834 202 aaPredicted RBP11.91□□□□□ -0.5
RDH11-209ENST00000557273 TMEM67Q5HYA8 995 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms