RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 B4DLN1 442 aa14.72□□□□□ -0.05
COPS7A-211ENST00000540408 ORC4O43929 436 aa14.72□□□□□ -0.05
COPS7A-211ENST00000540408 ACTN1P12814 892 aa14.72□□□□□ -0.05
COPS7A-211ENST00000540408 ATP2A2P16615 1042 aaKnown RBP14.72□□□□□ -0.05
COPS7A-211ENST00000540408 ALDH5A1P51649 535 aaPredicted RBP14.72□□□□□ -0.05
COPS7A-211ENST00000540408 MRPL12P52815 198 aaKnown RBP14.72□□□□□ -0.05
COPS7A-211ENST00000540408 RANBP17Q9H2T7 1088 aaKnown RBP14.72□□□□□ -0.05
COPS7A-211ENST00000540408 INCENPQ9NQS7 918 aa14.72□□□□□ -0.05
COPS7A-211ENST00000540408 YBX2Q9Y2T7 364 aaKnown RBP14.72□□□□□ -0.05
COPS7A-211ENST00000540408 PCDHA11Q9Y5I1 949 aa14.72□□□□□ -0.05
COPS7A-211ENST00000540408 DDX49Q9Y6V7 483 aaKnown RBP14.72□□□□□ -0.05
COPS7A-211ENST00000540408 NKRFO15226 690 aaKnown RBP eCLIP14.71□□□□□ -0.05
COPS7A-211ENST00000540408 KPNA6O60684 536 aa14.71□□□□□ -0.05
COPS7A-211ENST00000540408 MYL3P08590 195 aa14.71□□□□□ -0.05
COPS7A-211ENST00000540408 TOP1P11387 765 aaKnown RBP14.71□□□□□ -0.05
COPS7A-211ENST00000540408 SLC16A2P36021 539 aa14.71□□□□□ -0.05
COPS7A-211ENST00000540408 PDE4DQ08499 809 aa14.71□□□□□ -0.05
COPS7A-211ENST00000540408 ADGRE1Q14246 886 aa14.71□□□□□ -0.05
COPS7A-211ENST00000540408 RRP12Q5JTH9 1297 aaKnown RBP14.71□□□□□ -0.05
COPS7A-211ENST00000540408 SYDE2Q5VT97 1194 aa14.71□□□□□ -0.05
COPS7A-211ENST00000540408 BTNL9Q6UXG8 535 aa14.71□□□□□ -0.05
COPS7A-211ENST00000540408 OR6J1Q8NGC5 347 aa14.71□□□□□ -0.05
COPS7A-211ENST00000540408 EVI5LQ96CN4 794 aa14.71□□□□□ -0.05
COPS7A-211ENST00000540408 SCLYQ96I15 445 aa14.71□□□□□ -0.05
COPS7A-211ENST00000540408 PURBQ96QR8 312 aaKnown RBP14.71□□□□□ -0.05
COPS7A-211ENST00000540408 MTG1Q9BT17 334 aaPredicted RBP14.71□□□□□ -0.05
COPS7A-211ENST00000540408 WNT8AQ9H1J5 351 aa14.71□□□□□ -0.05
COPS7A-211ENST00000540408 GPCPD1Q9NPB8 672 aa14.71□□□□□ -0.05
COPS7A-211ENST00000540408 HELLSQ9NRZ9 838 aa14.71□□□□□ -0.05
COPS7A-211ENST00000540408 TNKSO95271 1327 aa14.7□□□□□ -0.06
COPS7A-211ENST00000540408 PTGS1P23219 599 aa14.7□□□□□ -0.06
COPS7A-211ENST00000540408 CALML3P27482 149 aa14.7□□□□□ -0.06
COPS7A-211ENST00000540408 NOVP48745 357 aa14.7□□□□□ -0.06
COPS7A-211ENST00000540408 RABGGTBP53611 331 aa14.7□□□□□ -0.06
COPS7A-211ENST00000540408 PURAQ00577 322 aaKnown RBP14.7□□□□□ -0.06
COPS7A-211ENST00000540408 ALX1Q15699 326 aa14.7□□□□□ -0.06
COPS7A-211ENST00000540408 AAK1Q2M2I8 961 aa14.7□□□□□ -0.06
COPS7A-211ENST00000540408 FAM47CQ5HY64 1035 aa14.7□□□□□ -0.06
COPS7A-211ENST00000540408 TMEM67Q5HYA8 995 aa14.7□□□□□ -0.06
COPS7A-211ENST00000540408 TMEM63BQ5T3F8 832 aa14.7□□□□□ -0.06
COPS7A-211ENST00000540408 TTBK2Q6IQ55 1244 aa14.7□□□□□ -0.06
COPS7A-211ENST00000540408 RNF207Q6ZRF8 634 aa14.7□□□□□ -0.06
COPS7A-211ENST00000540408 RETREG2Q8NC44 543 aa14.7□□□□□ -0.06
COPS7A-211ENST00000540408 OTUD7AQ8TE49 926 aaPredicted RBP14.7□□□□□ -0.06
COPS7A-211ENST00000540408 ADAMTS19Q8TE59 1207 aa14.7□□□□□ -0.06
COPS7A-211ENST00000540408 TCP11L1Q9NUJ3 509 aa14.7□□□□□ -0.06
COPS7A-211ENST00000540408 TRMT13Q9NUP7 481 aaKnown RBP14.7□□□□□ -0.06
COPS7A-211ENST00000540408 RBM47A0AV96 593 aaKnown RBP14.69□□□□□ -0.06
COPS7A-211ENST00000540408 KIF28PB7ZC32 967 aa14.69□□□□□ -0.06
COPS7A-211ENST00000540408 NFIBO00712 420 aa14.69□□□□□ -0.06
COPS7A-211ENST00000540408 GTPBP6O43824 516 aaPredicted RBP14.69□□□□□ -0.06
COPS7A-211ENST00000540408 FGRP09769 529 aa14.69□□□□□ -0.06
COPS7A-211ENST00000540408 CYP2C9P11712 490 aa14.69□□□□□ -0.06
COPS7A-211ENST00000540408 RFC2P35250 354 aa14.69□□□□□ -0.06
COPS7A-211ENST00000540408 PPP2R5BQ15173 497 aa14.69□□□□□ -0.06
COPS7A-211ENST00000540408 DEFB128Q7Z7B8 93 aa14.69□□□□□ -0.06
COPS7A-211ENST00000540408 MICALL1Q8N3F8 863 aa14.69□□□□□ -0.06
COPS7A-211ENST00000540408 UHRF1Q96T88 793 aaPredicted RBP14.69□□□□□ -0.06
COPS7A-211ENST00000540408 TMEM47Q9BQJ4 181 aa14.69□□□□□ -0.06
COPS7A-211ENST00000540408 NOD1Q9Y239 953 aa14.69□□□□□ -0.06
COPS7A-211ENST00000540408 FRMPD2Q68DX3 1309 aaPredicted RBP14.68□□□□□ -0.06
COPS7A-211ENST00000540408 COL9A1P20849 921 aa14.68□□□□□ -0.06
COPS7A-211ENST00000540408 PTPN11Q06124 597 aaPredicted RBP14.68□□□□□ -0.06
COPS7A-211ENST00000540408 BFSP2Q13515 415 aa14.68□□□□□ -0.06
COPS7A-211ENST00000540408 SKIV2LQ15477 1246 aaKnown RBP14.68□□□□□ -0.06
COPS7A-211ENST00000540408 NBPF20Q3BBV1 942 aa14.68□□□□□ -0.06
COPS7A-211ENST00000540408 ANKRD45Q5TZF3 282 aa14.68□□□□□ -0.06
COPS7A-211ENST00000540408 VPS53Q5VIR6 699 aa14.68□□□□□ -0.06
COPS7A-211ENST00000540408 NFRKBQ6P4R8 1299 aa14.68□□□□□ -0.06
COPS7A-211ENST00000540408 RASGRP2Q7LDG7 609 aa14.68□□□□□ -0.06
COPS7A-211ENST00000540408 DNERQ8NFT8 737 aa14.68□□□□□ -0.06
COPS7A-211ENST00000540408 SCFD2Q8WU76 684 aa14.68□□□□□ -0.06
COPS7A-211ENST00000540408 TTC14Q96N46 770 aa14.68□□□□□ -0.06
COPS7A-211ENST00000540408 SLC9A7Q96T83 725 aa14.68□□□□□ -0.06
COPS7A-211ENST00000540408 PCDHB15Q9Y5E8 787 aa14.68□□□□□ -0.06
COPS7A-211ENST00000540408 SPTBN5Q9NRC6 3674 aaKnown RBP14.67□□□□□ -0.06
COPS7A-211ENST00000540408 PITPNM1O00562 1244 aa14.67□□□□□ -0.06
COPS7A-211ENST00000540408 FOXP2O15409 715 aa14.67□□□□□ -0.06
COPS7A-211ENST00000540408 FGAP02671 866 aa14.67□□□□□ -0.06
COPS7A-211ENST00000540408 TXNP10599 105 aaKnown RBP14.67□□□□□ -0.06
COPS7A-211ENST00000540408 PCP11498 1178 aaKnown RBP14.67□□□□□ -0.06
COPS7A-211ENST00000540408 MYOGP15173 224 aa14.67□□□□□ -0.06
COPS7A-211ENST00000540408 TTLL4Q14679 1199 aa14.67□□□□□ -0.06
COPS7A-211ENST00000540408 MCMDC2Q4G0Z9 681 aa14.67□□□□□ -0.06
COPS7A-211ENST00000540408 MFSD6Q6ZSS7 791 aa14.67□□□□□ -0.06
COPS7A-211ENST00000540408 TICAM2Q86XR7 235 aa14.67□□□□□ -0.06
COPS7A-211ENST00000540408 PHOSPHO2Q8TCD6 241 aa14.67□□□□□ -0.06
COPS7A-211ENST00000540408 FTOQ9C0B1 505 aaKnown RBP eCLIP14.67□□□□□ -0.06
COPS7A-211ENST00000540408 MYO9BQ13459 2157 aa14.67□□□□□ -0.06
COPS7A-211ENST00000540408 A6NJR5 290 aa14.66□□□□□ -0.06
COPS7A-211ENST00000540408 CA3P07451 260 aa14.66□□□□□ -0.06
COPS7A-211ENST00000540408 PDHBP11177 359 aa14.66□□□□□ -0.06
COPS7A-211ENST00000540408 RPS6P62753 249 aaKnown RBP14.66□□□□□ -0.06
COPS7A-211ENST00000540408 SLC30A10Q6XR72 485 aa14.66□□□□□ -0.06
COPS7A-211ENST00000540408 CCDC155Q8N6L0 562 aa14.66□□□□□ -0.06
COPS7A-211ENST00000540408 CLEC4DQ8WXI8 215 aa14.66□□□□□ -0.06
COPS7A-211ENST00000540408 WDR19Q8NEZ3 1342 aa14.66□□□□□ -0.06
COPS7A-211ENST00000540408 IQCF3P0C7M6 154 aa14.65□□□□□ -0.06
COPS7A-211ENST00000540408 CHMP4BP1P59074 171 aa14.65□□□□□ -0.06
COPS7A-211ENST00000540408 ZNF543Q08ER8 600 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms