RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 DENND2CQ68D51 928 aa15.97■□□□□ 0.15
CACNB1-206ENST00000539338 LRRIQ1Q96JM4 1722 aa15.97■□□□□ 0.15
CACNB1-206ENST00000539338 IKBKBO14920 756 aa15.97■□□□□ 0.15
CACNB1-206ENST00000539338 GALNT17Q6IS24 598 aa15.97■□□□□ 0.15
CACNB1-206ENST00000539338 CEP128Q6ZU80 1094 aa15.97■□□□□ 0.15
CACNB1-206ENST00000539338 RETREG2Q8NC44 543 aa15.97■□□□□ 0.15
CACNB1-206ENST00000539338 CHURC1Q8WUH1 139 aa15.97■□□□□ 0.15
CACNB1-206ENST00000539338 RSRC1Q96IZ7 334 aaKnown RBP15.97■□□□□ 0.15
CACNB1-206ENST00000539338 MAN1B1Q9UKM7 699 aa15.97■□□□□ 0.15
CACNB1-206ENST00000539338 RAD17O75943 681 aa15.97■□□□□ 0.15
CACNB1-206ENST00000539338 VEGFAP15692 232 aaPredicted RBP15.97■□□□□ 0.15
CACNB1-206ENST00000539338 CDC25AP30304 524 aa15.97■□□□□ 0.15
CACNB1-206ENST00000539338 CYP4A11Q02928 519 aa15.97■□□□□ 0.15
CACNB1-206ENST00000539338 SLFNL1Q499Z3 407 aa15.97■□□□□ 0.15
CACNB1-206ENST00000539338 DPH5Q9H2P9 285 aa15.97■□□□□ 0.15
CACNB1-206ENST00000539338 SH2B2O14492 632 aaPredicted RBP15.96■□□□□ 0.15
CACNB1-206ENST00000539338 MAP7D1Q3KQU3 841 aa15.96■□□□□ 0.15
CACNB1-206ENST00000539338 RAB17Q9H0T7 212 aa15.96■□□□□ 0.15
CACNB1-206ENST00000539338 SOS2Q07890 1332 aaPredicted RBP15.96■□□□□ 0.15
CACNB1-206ENST00000539338 KRT15P19012 456 aa15.96■□□□□ 0.15
CACNB1-206ENST00000539338 VSIG1Q86XK7 387 aa15.96■□□□□ 0.15
CACNB1-206ENST00000539338 STMN2Q93045 179 aa15.96■□□□□ 0.15
CACNB1-206ENST00000539338 ZNF157P51786 506 aaPredicted RBP15.96■□□□□ 0.15
CACNB1-206ENST00000539338 FAM102BQ5T8I3 360 aa15.96■□□□□ 0.15
CACNB1-206ENST00000539338 CLEC4GQ6UXB4 293 aa15.96■□□□□ 0.15
CACNB1-206ENST00000539338 ZBED2Q9BTP6 218 aa15.96■□□□□ 0.15
CACNB1-206ENST00000539338 MMP1P03956 469 aa15.96■□□□□ 0.14
CACNB1-206ENST00000539338 ATP11AP98196 1134 aa15.96■□□□□ 0.14
CACNB1-206ENST00000539338 HHATQ5VTY9 493 aa15.96■□□□□ 0.14
CACNB1-206ENST00000539338 SMC1BQ8NDV3 1235 aa15.96■□□□□ 0.14
CACNB1-206ENST00000539338 PDE11AQ9HCR9 933 aa15.96■□□□□ 0.14
CACNB1-206ENST00000539338 ZSWIM5Q9P217 1185 aa15.96■□□□□ 0.14
CACNB1-206ENST00000539338 MKRN1Q9UHC7 482 aaKnown RBP15.96■□□□□ 0.14
CACNB1-206ENST00000539338 USP17L3A6NCW0 530 aa15.95■□□□□ 0.14
CACNB1-206ENST00000539338 USP17L4A6NCW7 530 aa15.95■□□□□ 0.14
CACNB1-206ENST00000539338 USP17L1Q7RTZ2 530 aa15.95■□□□□ 0.14
CACNB1-206ENST00000539338 ANKRD42Q8N9B4 389 aa15.95■□□□□ 0.14
CACNB1-206ENST00000539338 SAMSN1Q9NSI8 373 aaKnown RBP15.95■□□□□ 0.14
CACNB1-206ENST00000539338 MYCP01106 439 aaPredicted RBP15.95■□□□□ 0.14
CACNB1-206ENST00000539338 USP17L8P0C7I0 530 aa15.95■□□□□ 0.14
CACNB1-206ENST00000539338 TCP1P17987 556 aaKnown RBP15.95■□□□□ 0.14
CACNB1-206ENST00000539338 CDC23Q9UJX2 597 aa15.95■□□□□ 0.14
CACNB1-206ENST00000539338 RIMS1Q86UR5 1692 aaKnown RBP15.95■□□□□ 0.14
CACNB1-206ENST00000539338 ARHGAP25P42331 645 aa15.95■□□□□ 0.14
CACNB1-206ENST00000539338 RASSF7Q02833 373 aa15.95■□□□□ 0.14
CACNB1-206ENST00000539338 SPATA24Q86W54 205 aa15.95■□□□□ 0.14
CACNB1-206ENST00000539338 PPFIBP2Q8ND30 876 aa15.95■□□□□ 0.14
CACNB1-206ENST00000539338 TESPA1A2RU30 521 aaPredicted RBP15.95■□□□□ 0.14
CACNB1-206ENST00000539338 SORBS3O60504 671 aa15.95■□□□□ 0.14
CACNB1-206ENST00000539338 TBC1D8O95759 1140 aa15.95■□□□□ 0.14
CACNB1-206ENST00000539338 ZNF131P52739 623 aa15.95■□□□□ 0.14
CACNB1-206ENST00000539338 CERKLQ49MI3 558 aaPredicted RBP15.95■□□□□ 0.14
CACNB1-206ENST00000539338 SYNE4Q8N205 404 aa15.95■□□□□ 0.14
CACNB1-206ENST00000539338 RAB3IL1Q8TBN0 382 aa15.95■□□□□ 0.14
CACNB1-206ENST00000539338 PGBD1Q96JS3 809 aa15.95■□□□□ 0.14
CACNB1-206ENST00000539338 ERBB3P21860 1342 aa15.95■□□□□ 0.14
CACNB1-206ENST00000539338 GLI2P10070 1586 aa15.94■□□□□ 0.14
CACNB1-206ENST00000539338 MRPS9P82933 396 aaKnown RBP15.94■□□□□ 0.14
CACNB1-206ENST00000539338 CROCCP2Q86T23 111 aa15.94■□□□□ 0.14
CACNB1-206ENST00000539338 GJA10Q969M2 543 aa15.94■□□□□ 0.14
CACNB1-206ENST00000539338 FAM184BQ9ULE4 1060 aa15.94■□□□□ 0.14
CACNB1-206ENST00000539338 PCDHA4Q9UN74 947 aa15.94■□□□□ 0.14
CACNB1-206ENST00000539338 KIAA1024Q9UPX6 916 aa15.94■□□□□ 0.14
CACNB1-206ENST00000539338 CYP2D7A0A087X1C5 515 aa15.94■□□□□ 0.14
CACNB1-206ENST00000539338 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.94■□□□□ 0.14
CACNB1-206ENST00000539338 LMNB1P20700 586 aa15.94■□□□□ 0.14
CACNB1-206ENST00000539338 SRGAP1Q7Z6B7 1085 aa15.94■□□□□ 0.14
CACNB1-206ENST00000539338 NLRX1Q86UT6 975 aa15.94■□□□□ 0.14
CACNB1-206ENST00000539338 FBXO11Q86XK2 927 aa15.94■□□□□ 0.14
CACNB1-206ENST00000539338 FAM178BQ8IXR5 827 aa15.94■□□□□ 0.14
CACNB1-206ENST00000539338 SLFN12Q8IYM2 578 aa15.94■□□□□ 0.14
CACNB1-206ENST00000539338 PROCA1Q8NCQ7 364 aaPredicted RBP15.94■□□□□ 0.14
CACNB1-206ENST00000539338 GJB4Q9NTQ9 266 aa15.94■□□□□ 0.14
CACNB1-206ENST00000539338 K7ENM7 598 aa15.94■□□□□ 0.14
CACNB1-206ENST00000539338 PCP11498 1178 aaKnown RBP15.94■□□□□ 0.14
CACNB1-206ENST00000539338 VPS41P49754 854 aa15.94■□□□□ 0.14
CACNB1-206ENST00000539338 VPS37BQ9H9H4 285 aa15.94■□□□□ 0.14
CACNB1-206ENST00000539338 PCDHB6Q9Y5E3 794 aa15.94■□□□□ 0.14
CACNB1-206ENST00000539338 PCDHA1Q9Y5I3 950 aa15.94■□□□□ 0.14
CACNB1-206ENST00000539338 RGS16O15492 202 aaPredicted RBP15.94■□□□□ 0.14
CACNB1-206ENST00000539338 ICA1Q05084 483 aa15.94■□□□□ 0.14
CACNB1-206ENST00000539338 EHHADHQ08426 723 aa15.94■□□□□ 0.14
CACNB1-206ENST00000539338 NCAPG2Q86XI2 1143 aa15.94■□□□□ 0.14
CACNB1-206ENST00000539338 UHMK1Q8TAS1 419 aaKnown RBP15.94■□□□□ 0.14
CACNB1-206ENST00000539338 PLCB1Q9NQ66 1216 aa15.94■□□□□ 0.14
CACNB1-206ENST00000539338 PIH1D3Q9NQM4 214 aaKnown RBP15.94■□□□□ 0.14
CACNB1-206ENST00000539338 PPP2R5DQ14738 602 aa15.93■□□□□ 0.14
CACNB1-206ENST00000539338 LRRC41Q15345 812 aa15.93■□□□□ 0.14
CACNB1-206ENST00000539338 MFSD14CQ5VZR4 134 aa15.93■□□□□ 0.14
CACNB1-206ENST00000539338 NLRP10Q86W26 655 aa15.93■□□□□ 0.14
CACNB1-206ENST00000539338 RABGGTAQ92696 567 aa15.93■□□□□ 0.14
CACNB1-206ENST00000539338 NARFQ9UHQ1 456 aa15.93■□□□□ 0.14
CACNB1-206ENST00000539338 GAS8O95995 478 aa15.93■□□□□ 0.14
CACNB1-206ENST00000539338 ALAS1P13196 640 aa15.93■□□□□ 0.14
CACNB1-206ENST00000539338 SLC8A3P57103 927 aa15.93■□□□□ 0.14
CACNB1-206ENST00000539338 EPHA10Q5JZY3 1008 aa15.93■□□□□ 0.14
CACNB1-206ENST00000539338 NAA35Q5VZE5 725 aa15.93■□□□□ 0.14
CACNB1-206ENST00000539338 SLFN13Q68D06 897 aa15.93■□□□□ 0.14
CACNB1-206ENST00000539338 RNF34Q969K3 372 aa15.93■□□□□ 0.14
CACNB1-206ENST00000539338 ZFYVE28Q9HCC9 887 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms