RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 SLC25A27O95847 323 aa14.07□□□□□ -0.16
SCARB1-204ENST00000535005 NCLP19338 710 aaKnown RBP14.07□□□□□ -0.16
SCARB1-204ENST00000535005 GNA11P29992 359 aa14.07□□□□□ -0.16
SCARB1-204ENST00000535005 MRPL12P52815 198 aaKnown RBP14.07□□□□□ -0.16
SCARB1-204ENST00000535005 NLRP5P59047 1200 aa14.07□□□□□ -0.16
SCARB1-204ENST00000535005 ERVK-9P63128 1117 aa14.07□□□□□ -0.16
SCARB1-204ENST00000535005 ERVK-24P63145 666 aa14.07□□□□□ -0.16
SCARB1-204ENST00000535005 Q3C1V9 767 aa14.07□□□□□ -0.16
SCARB1-204ENST00000535005 IFFO2Q5TF58 517 aa14.07□□□□□ -0.16
SCARB1-204ENST00000535005 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.07□□□□□ -0.161e-7■□□□□ 8.9
SCARB1-204ENST00000535005 SHCBP1Q8NEM2 672 aa14.07□□□□□ -0.16
SCARB1-204ENST00000535005 CHST13Q8NET6 341 aa14.07□□□□□ -0.16
SCARB1-204ENST00000535005 GPRC5AQ8NFJ5 357 aa14.07□□□□□ -0.16
SCARB1-204ENST00000535005 PAGR1Q9BTK6 254 aa14.07□□□□□ -0.16
SCARB1-204ENST00000535005 MOV10L1Q9BXT6 1211 aaKnown RBP14.07□□□□□ -0.16
SCARB1-204ENST00000535005 C6orf50Q9HD87 102 aa14.07□□□□□ -0.16
SCARB1-204ENST00000535005 RIC8AQ9NPQ8 531 aa14.07□□□□□ -0.16
SCARB1-204ENST00000535005 PCDHA4Q9UN74 947 aa14.07□□□□□ -0.16
SCARB1-204ENST00000535005 KCNJ14Q9UNX9 436 aa14.07□□□□□ -0.16
SCARB1-204ENST00000535005 RIPK3Q9Y572 518 aa14.07□□□□□ -0.16
SCARB1-204ENST00000535005 BCRP11274 1271 aa14.06□□□□□ -0.16
SCARB1-204ENST00000535005 ALAS1P13196 640 aa14.06□□□□□ -0.16
SCARB1-204ENST00000535005 GUCY1B3Q02153 619 aa14.06□□□□□ -0.16
SCARB1-204ENST00000535005 FAM110CQ1W6H9 321 aa14.06□□□□□ -0.16
SCARB1-204ENST00000535005 C17orf99Q6UX52 265 aa14.06□□□□□ -0.16
SCARB1-204ENST00000535005 GPT2Q8TD30 523 aa14.06□□□□□ -0.16
SCARB1-204ENST00000535005 TRERF1Q96PN7 1200 aa14.06□□□□□ -0.16
SCARB1-204ENST00000535005 PSTPIP2Q9H939 334 aa14.06□□□□□ -0.16
SCARB1-204ENST00000535005 COL11A1P12107 1806 aaPredicted RBP14.06□□□□□ -0.16
SCARB1-204ENST00000535005 PIK3CDO00329 1044 aa14.06□□□□□ -0.16
SCARB1-204ENST00000535005 PRPF40AO75400 957 aaKnown RBP14.06□□□□□ -0.16
SCARB1-204ENST00000535005 BRD1O95696 1058 aa14.06□□□□□ -0.16
SCARB1-204ENST00000535005 TAL1P17542 331 aaPredicted RBP14.06□□□□□ -0.16
SCARB1-204ENST00000535005 ADCY7P51828 1080 aa14.06□□□□□ -0.16
SCARB1-204ENST00000535005 FOSBP53539 338 aa14.06□□□□□ -0.16
SCARB1-204ENST00000535005 CCNA1P78396 465 aa14.06□□□□□ -0.16
SCARB1-204ENST00000535005 PLS1Q14651 629 aa14.06□□□□□ -0.16
SCARB1-204ENST00000535005 SAFBQ15424 915 aaKnown RBP eCLIP14.06□□□□□ -0.162e-6■■□□□ 11.8
SCARB1-204ENST00000535005 UTP14CQ5TAP6 766 aaKnown RBP14.06□□□□□ -0.16
SCARB1-204ENST00000535005 MCF2L2Q86YR7 1114 aa14.06□□□□□ -0.16
SCARB1-204ENST00000535005 BLIDQ8IZY5 108 aa14.06□□□□□ -0.16
SCARB1-204ENST00000535005 BICD2Q8TD16 824 aa14.06□□□□□ -0.16
SCARB1-204ENST00000535005 CUL5Q93034 780 aa14.06□□□□□ -0.16
SCARB1-204ENST00000535005 RNF146Q9NTX7 359 aa14.06□□□□□ -0.16
SCARB1-204ENST00000535005 MAP3K20Q9NYL2 800 aaKnown RBP14.06□□□□□ -0.16
SCARB1-204ENST00000535005 FBXO40Q9UH90 709 aa14.06□□□□□ -0.16
SCARB1-204ENST00000535005 VPS37CA5D8V6 355 aaPredicted RBP14.05□□□□□ -0.16
SCARB1-204ENST00000535005 M0R2N6 131 aa14.05□□□□□ -0.16
SCARB1-204ENST00000535005 PEX10O60683 326 aa14.05□□□□□ -0.16
SCARB1-204ENST00000535005 CRHR2Q13324 411 aa14.05□□□□□ -0.16
SCARB1-204ENST00000535005 MUM1L1Q5H9M0 696 aa14.05□□□□□ -0.16
SCARB1-204ENST00000535005 MCTP2Q6DN12 878 aa14.05□□□□□ -0.16
SCARB1-204ENST00000535005 DIS3L2Q8IYB7 885 aaKnown RBP14.05□□□□□ -0.16
SCARB1-204ENST00000535005 ANKRD13CQ8N6S4 541 aa14.05□□□□□ -0.16
SCARB1-204ENST00000535005 FOXP1Q9H334 677 aaPredicted RBP14.05□□□□□ -0.16
SCARB1-204ENST00000535005 MROH8Q9H579 483 aa14.05□□□□□ -0.16
SCARB1-204ENST00000535005 ACAD9Q9H845 621 aa14.05□□□□□ -0.16
SCARB1-204ENST00000535005 BRMS1Q9HCU9 246 aa14.05□□□□□ -0.16
SCARB1-204ENST00000535005 PRDM4Q9UKN5 801 aa14.05□□□□□ -0.16
SCARB1-204ENST00000535005 MEIS2O14770 477 aa14.04□□□□□ -0.16
SCARB1-204ENST00000535005 ZSCAN22P10073 491 aaPredicted RBP14.04□□□□□ -0.16
SCARB1-204ENST00000535005 U2AF2P26368 475 aaKnown RBP eCLIP14.04□□□□□ -0.16
SCARB1-204ENST00000535005 KRT2P35908 639 aa14.04□□□□□ -0.16
SCARB1-204ENST00000535005 CLK2P49760 499 aaKnown RBP14.04□□□□□ -0.16
SCARB1-204ENST00000535005 PKP1Q13835 747 aa14.04□□□□□ -0.16
SCARB1-204ENST00000535005 TNFRSF25Q93038 417 aa14.04□□□□□ -0.16
SCARB1-204ENST00000535005 TSPY26PQ9H489 355 aa14.04□□□□□ -0.16
SCARB1-204ENST00000535005 FAM13BQ9NYF5 915 aa14.04□□□□□ -0.16
SCARB1-204ENST00000535005 CPA4Q9UI42 421 aa14.04□□□□□ -0.16
SCARB1-204ENST00000535005 ZDHHC9Q9Y397 364 aa14.04□□□□□ -0.16
SCARB1-204ENST00000535005 SMCHD1A6NHR9 2005 aa14.04□□□□□ -0.16
SCARB1-204ENST00000535005 BTBD18B2RXH4 712 aa14.04□□□□□ -0.16
SCARB1-204ENST00000535005 NFIBO00712 420 aa14.04□□□□□ -0.16
SCARB1-204ENST00000535005 ERCC3P19447 782 aa14.04□□□□□ -0.16
SCARB1-204ENST00000535005 HSD17B4P51659 736 aa14.04□□□□□ -0.16
SCARB1-204ENST00000535005 MYRIPQ8NFW9 859 aa14.04□□□□□ -0.16
SCARB1-204ENST00000535005 RNF186Q9NXI6 227 aa14.04□□□□□ -0.16
SCARB1-204ENST00000535005 GCOM1H8Y6P7 765 aaPredicted RBP14.03□□□□□ -0.16
SCARB1-204ENST00000535005 ADAMTS3O15072 1205 aa14.03□□□□□ -0.16
SCARB1-204ENST00000535005 POLR2MP0CAP2 368 aa14.03□□□□□ -0.16
SCARB1-204ENST00000535005 GTF2F1P35269 517 aaKnown RBP eCLIP14.03□□□□□ -0.166e-7■■■■□ 21.5
SCARB1-204ENST00000535005 REXO1Q8N1G1 1221 aaKnown RBP14.03□□□□□ -0.16
SCARB1-204ENST00000535005 DNAJC5GQ8N7S2 189 aa14.03□□□□□ -0.16
SCARB1-204ENST00000535005 OXER1Q8TDS5 423 aa14.03□□□□□ -0.16
SCARB1-204ENST00000535005 TBC1D5Q92609 795 aa14.03□□□□□ -0.16
SCARB1-204ENST00000535005 CCDC94Q9BW85 323 aaPredicted RBP14.03□□□□□ -0.16
SCARB1-204ENST00000535005 ZSCAN16Q9H4T2 348 aaPredicted RBP14.03□□□□□ -0.16
SCARB1-204ENST00000535005 HOMER2Q9NSB8 354 aa14.03□□□□□ -0.16
SCARB1-204ENST00000535005 TMEM63CQ9P1W3 806 aa14.03□□□□□ -0.16
SCARB1-204ENST00000535005 PCDHA6Q9UN73 950 aa14.03□□□□□ -0.16
SCARB1-204ENST00000535005 PCDHA8Q9Y5H6 950 aa14.03□□□□□ -0.16
SCARB1-204ENST00000535005 LETM1O95202 739 aaPredicted RBP14.02□□□□□ -0.16
SCARB1-204ENST00000535005 FOSP01100 380 aaPredicted RBP14.02□□□□□ -0.16
SCARB1-204ENST00000535005 RESTQ13127 1097 aa14.02□□□□□ -0.16
SCARB1-204ENST00000535005 AP3B2Q13367 1082 aa14.02□□□□□ -0.16
SCARB1-204ENST00000535005 NCAPG2Q86XI2 1143 aa14.02□□□□□ -0.16
SCARB1-204ENST00000535005 PORCNQ9H237 461 aa14.02□□□□□ -0.16
SCARB1-204ENST00000535005 SAGE1Q9NXZ1 904 aa14.02□□□□□ -0.16
SCARB1-204ENST00000535005 KIF28PB7ZC32 967 aa14.01□□□□□ -0.17
SCARB1-204ENST00000535005 F13A1P00488 732 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms