RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 GJB2P29033 226 aa20.07■□□□□ 0.8
NXF1-216ENST00000533499 RGS2P41220 211 aa20.07■□□□□ 0.8
NXF1-216ENST00000533499 FLT3LGP49771 235 aa20.07■□□□□ 0.8
NXF1-216ENST00000533499 RPS6P62753 249 aaKnown RBP20.07■□□□□ 0.8
NXF1-216ENST00000533499 MAP2K5Q13163 448 aa20.07■□□□□ 0.8
NXF1-216ENST00000533499 PPP1R18Q6NYC8 613 aa20.07■□□□□ 0.8
NXF1-216ENST00000533499 FCHSD1Q86WN1 690 aa20.07■□□□□ 0.8
NXF1-216ENST00000533499 SOCS4Q8WXH5 440 aa20.07■□□□□ 0.8
NXF1-216ENST00000533499 C6orf50Q9HD87 102 aa20.07■□□□□ 0.8
NXF1-216ENST00000533499 GJB4Q9NTQ9 266 aa20.07■□□□□ 0.8
NXF1-216ENST00000533499 KCNJ14Q9UNX9 436 aa20.07■□□□□ 0.8
NXF1-216ENST00000533499 MRPL12P52815 198 aaKnown RBP20.06■□□□□ 0.8
NXF1-216ENST00000533499 GUCY1B3Q02153 619 aa20.06■□□□□ 0.8
NXF1-216ENST00000533499 CUL4AQ13619 759 aa20.06■□□□□ 0.8
NXF1-216ENST00000533499 GRB14Q14449 540 aa20.06■□□□□ 0.8
NXF1-216ENST00000533499 UBE2SQ16763 222 aa20.06■□□□□ 0.8
NXF1-216ENST00000533499 USP17L6PQ6QN14 398 aa20.06■□□□□ 0.8
NXF1-216ENST00000533499 OTOP1Q7RTM1 612 aa20.06■□□□□ 0.8
NXF1-216ENST00000533499 RAET1EQ8TD07 263 aa20.06■□□□□ 0.8
NXF1-216ENST00000533499 PURBQ96QR8 312 aaKnown RBP20.06■□□□□ 0.8
NXF1-216ENST00000533499 SLC5A4Q9NY91 659 aa20.06■□□□□ 0.8
NXF1-216ENST00000533499 CYP39A1Q9NYL5 469 aa20.06■□□□□ 0.8
NXF1-216ENST00000533499 SRRDQ9UH36 339 aa20.06■□□□□ 0.8
NXF1-216ENST00000533499 KIF3AQ9Y496 699 aa20.06■□□□□ 0.8
NXF1-216ENST00000533499 OPLAHO14841 1288 aa20.05■□□□□ 0.8
NXF1-216ENST00000533499 COBLO75128 1261 aa20.05■□□□□ 0.8
NXF1-216ENST00000533499 GNRH1P01148 92 aa20.05■□□□□ 0.8
NXF1-216ENST00000533499 CNTN2Q02246 1040 aa20.05■□□□□ 0.8
NXF1-216ENST00000533499 MORN1Q5T089 497 aa20.05■□□□□ 0.8
NXF1-216ENST00000533499 ABRAQ8N0Z2 381 aa20.05■□□□□ 0.8
NXF1-216ENST00000533499 C8orf76Q96K31 380 aa20.05■□□□□ 0.8
NXF1-216ENST00000533499 RBBP6Q7Z6E9 1792 aaKnown RBP20.05■□□□□ 0.8
NXF1-216ENST00000533499 CTU1Q7Z7A3 348 aaKnown RBP20.04■□□□□ 0.8
NXF1-216ENST00000533499 SYTL5Q8TDW5 730 aaPredicted RBP20.04■□□□□ 0.8
NXF1-216ENST00000533499 RIC8AQ9NPQ8 531 aa20.04■□□□□ 0.8
NXF1-216ENST00000533499 SH3GLB2Q9NR46 395 aa20.04■□□□□ 0.8
NXF1-216ENST00000533499 TSHZ2Q9NRE2 1034 aa20.04■□□□□ 0.8
NXF1-216ENST00000533499 BIN2Q9UBW5 565 aaPredicted RBP20.04■□□□□ 0.8
NXF1-216ENST00000533499 DAXXQ9UER7 740 aaPredicted RBP20.04■□□□□ 0.8
NXF1-216ENST00000533499 GJD2Q9UKL4 321 aa20.04■□□□□ 0.8
NXF1-216ENST00000533499 GNA11P29992 359 aa20.03■□□□□ 0.8
NXF1-216ENST00000533499 JAKMIP3Q5VZ66 844 aa20.03■□□□□ 0.8
NXF1-216ENST00000533499 RGS22Q8NE09 1264 aa20.03■□□□□ 0.8
NXF1-216ENST00000533499 TAAR1Q96RJ0 339 aa20.03■□□□□ 0.8
NXF1-216ENST00000533499 APBA2Q99767 749 aa20.03■□□□□ 0.8
NXF1-216ENST00000533499 TMEM260Q9NX78 707 aa20.03■□□□□ 0.8
NXF1-216ENST00000533499 SPDYE3A6NKU9 549 aa20.02■□□□□ 0.8
NXF1-216ENST00000533499 UBXN2AP68543 259 aa20.02■□□□□ 0.8
NXF1-216ENST00000533499 KRT40Q6A162 431 aa20.02■□□□□ 0.8
NXF1-216ENST00000533499 NPLOC4Q8TAT6 608 aa20.02■□□□□ 0.8
NXF1-216ENST00000533499 BICD2Q8TD16 824 aa20.02■□□□□ 0.8
NXF1-216ENST00000533499 RASGRP4Q8TDF6 673 aa20.02■□□□□ 0.8
NXF1-216ENST00000533499 SHISA4Q96DD7 197 aa20.02■□□□□ 0.8
NXF1-216ENST00000533499 PGBD1Q96JS3 809 aa20.02■□□□□ 0.8
NXF1-216ENST00000533499 GLT8D2Q9H1C3 349 aa20.02■□□□□ 0.8
NXF1-216ENST00000533499 COL20A1Q9P218 1284 aa20.02■□□□□ 0.8
NXF1-216ENST00000533499 ADD3Q9UEY8 706 aaKnown RBP20.02■□□□□ 0.8
NXF1-216ENST00000533499 PLXNA1Q9UIW2 1896 aa20.02■□□□□ 0.8
NXF1-216ENST00000533499 H3BQV1 296 aa20.01■□□□□ 0.79
NXF1-216ENST00000533499 ADCY3O60266 1144 aa20.01■□□□□ 0.79
NXF1-216ENST00000533499 ELNP15502 786 aa20.01■□□□□ 0.79
NXF1-216ENST00000533499 HSD17B4P51659 736 aa20.01■□□□□ 0.79
NXF1-216ENST00000533499 PRMT2P55345 433 aa20.01■□□□□ 0.79
NXF1-216ENST00000533499 GNL2Q13823 731 aaKnown RBP20.01■□□□□ 0.79
NXF1-216ENST00000533499 SAFBQ15424 915 aaKnown RBP eCLIP20.01■□□□□ 0.79
NXF1-216ENST00000533499 CCL14Q16627 93 aa20.01■□□□□ 0.79
NXF1-216ENST00000533499 ZNF792Q3KQV3 632 aa20.01■□□□□ 0.79
NXF1-216ENST00000533499 IFFO2Q5TF58 517 aa20.01■□□□□ 0.79
NXF1-216ENST00000533499 ARHGEF16Q5VV41 709 aa20.01■□□□□ 0.79
NXF1-216ENST00000533499 REXO1Q8N1G1 1221 aaKnown RBP20.01■□□□□ 0.79
NXF1-216ENST00000533499 FAM133AQ8N9E0 248 aa20.01■□□□□ 0.79
NXF1-216ENST00000533499 INTS4Q96HW7 963 aaKnown RBP20.01■□□□□ 0.79
NXF1-216ENST00000533499 RMDN3Q96TC7 470 aa20.01■□□□□ 0.79
NXF1-216ENST00000533499 ZMYND12Q9H0C1 365 aa20.01■□□□□ 0.79
NXF1-216ENST00000533499 BRMS1Q9HCU9 246 aa20.01■□□□□ 0.79
NXF1-216ENST00000533499 PRDM10Q9NQV6 1147 aa20.01■□□□□ 0.79
NXF1-216ENST00000533499 PCDHA4Q9UN74 947 aa20.01■□□□□ 0.79
NXF1-216ENST00000533499 PTCH2Q9Y6C5 1203 aa20.01■□□□□ 0.79
NXF1-216ENST00000533499 ESYT2A0FGR8 921 aa20■□□□□ 0.79
NXF1-216ENST00000533499 SOWAHBA6NEL2 793 aa20■□□□□ 0.79
NXF1-216ENST00000533499 MEIS2O14770 477 aa20■□□□□ 0.79
NXF1-216ENST00000533499 EIF2AK2P19525 551 aaKnown RBP20■□□□□ 0.79
NXF1-216ENST00000533499 LARP1BQ659C4 914 aaKnown RBP20■□□□□ 0.79
NXF1-216ENST00000533499 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20■□□□□ 0.79
NXF1-216ENST00000533499 BLIDQ8IZY5 108 aa20■□□□□ 0.79
NXF1-216ENST00000533499 USP6NLQ92738 828 aa20■□□□□ 0.79
NXF1-216ENST00000533499 MAP3K20Q9NYL2 800 aaKnown RBP20■□□□□ 0.79
NXF1-216ENST00000533499 PTPN22Q9Y2R2 807 aa20■□□□□ 0.79
NXF1-216ENST00000533499 DDX49Q9Y6V7 483 aaKnown RBP20■□□□□ 0.79
NXF1-216ENST00000533499 DNAJC25-GNG10A0A024R161 153 aa19.99■□□□□ 0.79
NXF1-216ENST00000533499 ADAMTS3O15072 1205 aa19.99■□□□□ 0.79
NXF1-216ENST00000533499 MYCLP12524 364 aaPredicted RBP19.99■□□□□ 0.79
NXF1-216ENST00000533499 KRT2P35908 639 aa19.99■□□□□ 0.79
NXF1-216ENST00000533499 MCTP1Q6DN14 999 aa19.99■□□□□ 0.79
NXF1-216ENST00000533499 NSUN6Q8TEA1 469 aaKnown RBP19.99■□□□□ 0.79
NXF1-216ENST00000533499 MAML3Q96JK9 1138 aa19.99■□□□□ 0.79
NXF1-216ENST00000533499 MPHOSPH6Q99547 160 aaKnown RBP19.99■□□□□ 0.79
NXF1-216ENST00000533499 PHF20Q9BVI0 1012 aa19.99■□□□□ 0.79
NXF1-216ENST00000533499 EHMT1Q9H9B1 1298 aa19.99■□□□□ 0.79
NXF1-216ENST00000533499 PCDHA6Q9UN73 950 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms