RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 GPAA1O43292 621 aa17.16■□□□□ 0.34
CDC27-209ENST00000532893 ARHGEF15O94989 841 aa17.16■□□□□ 0.34
CDC27-209ENST00000532893 MYL3P08590 195 aa17.16■□□□□ 0.34
CDC27-209ENST00000532893 HNRNPUQ00839 825 aaKnown RBP eCLIP17.16■□□□□ 0.34
CDC27-209ENST00000532893 TFAP4Q01664 338 aa17.16■□□□□ 0.34
CDC27-209ENST00000532893 KCTD1Q719H9 257 aa17.16■□□□□ 0.34
CDC27-209ENST00000532893 KBTBD3Q8NAB2 608 aa17.16■□□□□ 0.34
CDC27-209ENST00000532893 APPBP2Q92624 585 aa17.16■□□□□ 0.34
CDC27-209ENST00000532893 GMCL1Q96IK5 515 aa17.16■□□□□ 0.34
CDC27-209ENST00000532893 LRRCC1Q9C099 1032 aa17.16■□□□□ 0.34
CDC27-209ENST00000532893 VTA1Q9NP79 307 aa17.16■□□□□ 0.34
CDC27-209ENST00000532893 HCN4Q9Y3Q4 1203 aa17.16■□□□□ 0.34
CDC27-209ENST00000532893 PATL2C9JE40 543 aaKnown RBP17.15■□□□□ 0.34
CDC27-209ENST00000532893 MS4A1P11836 297 aa17.15■□□□□ 0.34
CDC27-209ENST00000532893 ACTN1P12814 892 aa17.15■□□□□ 0.34
CDC27-209ENST00000532893 GNAT2P19087 354 aa17.15■□□□□ 0.34
CDC27-209ENST00000532893 TAP1Q03518 808 aa17.15■□□□□ 0.34
CDC27-209ENST00000532893 DUSP28Q4G0W2 176 aa17.15■□□□□ 0.34
CDC27-209ENST00000532893 TMEM31Q5JXX7 168 aa17.15■□□□□ 0.34
CDC27-209ENST00000532893 PPP1R13LQ8WUF5 828 aa17.15■□□□□ 0.34
CDC27-209ENST00000532893 HLA-CQ95604 372 aa17.15■□□□□ 0.34
CDC27-209ENST00000532893 WDR11Q9BZH6 1224 aa17.15■□□□□ 0.34
CDC27-209ENST00000532893 POLR3EQ9NVU0 708 aa17.15■□□□□ 0.34
CDC27-209ENST00000532893 DDX19BQ9UMR2 479 aa17.15■□□□□ 0.34
CDC27-209ENST00000532893 ARIH1Q9Y4X5 557 aaPredicted RBP17.15■□□□□ 0.34
CDC27-209ENST00000532893 MYH7P12883 1935 aa17.14■□□□□ 0.33
CDC27-209ENST00000532893 KIF28PB7ZC32 967 aa17.14■□□□□ 0.33
CDC27-209ENST00000532893 M0R2C6 588 aa17.14■□□□□ 0.33
CDC27-209ENST00000532893 PLA2G6O60733 806 aa17.14■□□□□ 0.33
CDC27-209ENST00000532893 PURAQ00577 322 aaKnown RBP17.14■□□□□ 0.33
CDC27-209ENST00000532893 PDE4BQ07343 736 aa17.14■□□□□ 0.33
CDC27-209ENST00000532893 NBPF20Q3BBV1 942 aa17.14■□□□□ 0.33
CDC27-209ENST00000532893 FAM47CQ5HY64 1035 aa17.14■□□□□ 0.33
CDC27-209ENST00000532893 RCSD1Q6JBY9 416 aa17.14■□□□□ 0.33
CDC27-209ENST00000532893 IFNL3Q8IZI9 196 aa17.14■□□□□ 0.33
CDC27-209ENST00000532893 PHOSPHO2Q8TCD6 241 aa17.14■□□□□ 0.33
CDC27-209ENST00000532893 MORC4Q8TE76 937 aa17.14■□□□□ 0.33
CDC27-209ENST00000532893 SLC9A7Q96T83 725 aa17.14■□□□□ 0.33
CDC27-209ENST00000532893 FTOQ9C0B1 505 aaKnown RBP eCLIP17.14■□□□□ 0.33
CDC27-209ENST00000532893 GPHNQ9NQX3 736 aaPredicted RBP17.14■□□□□ 0.33
CDC27-209ENST00000532893 ECHDC1Q9NTX5 307 aa17.14■□□□□ 0.33
CDC27-209ENST00000532893 CCPG1Q9ULG6 757 aa17.14■□□□□ 0.33
CDC27-209ENST00000532893 HERC6Q8IVU3 1022 aa17.13■□□□□ 0.33
CDC27-209ENST00000532893 RETREG2Q8NC44 543 aa17.13■□□□□ 0.33
CDC27-209ENST00000532893 KHSRPQ92945 711 aaKnown RBP eCLIP17.13■□□□□ 0.335e-8■□□□□ 11.1
CDC27-209ENST00000532893 MTG1Q9BT17 334 aaPredicted RBP17.13■□□□□ 0.33
CDC27-209ENST00000532893 PRR12Q9ULL5 1215 aa17.13■□□□□ 0.33
CDC27-209ENST00000532893 MTMR7Q9Y216 660 aa17.13■□□□□ 0.33
CDC27-209ENST00000532893 IQCF3P0C7M6 154 aa17.12■□□□□ 0.33
CDC27-209ENST00000532893 RFC2P35250 354 aa17.12■□□□□ 0.33
CDC27-209ENST00000532893 CPT1AP50416 773 aa17.12■□□□□ 0.33
CDC27-209ENST00000532893 GRB10Q13322 594 aa17.12■□□□□ 0.33
CDC27-209ENST00000532893 BAATQ14032 418 aaPredicted RBP17.12■□□□□ 0.33
CDC27-209ENST00000532893 TSHZ3Q63HK5 1081 aa17.12■□□□□ 0.33
CDC27-209ENST00000532893 RASGRP2Q7LDG7 609 aa17.12■□□□□ 0.33
CDC27-209ENST00000532893 SPRED2Q7Z698 418 aa17.12■□□□□ 0.33
CDC27-209ENST00000532893 STX8Q9UNK0 236 aa17.12■□□□□ 0.33
CDC27-209ENST00000532893 PLIN4Q96Q06 1357 aa17.12■□□□□ 0.33
CDC27-209ENST00000532893 FAM86C2PA6NEL3 165 aa17.11■□□□□ 0.33
CDC27-209ENST00000532893 ZFYP08048 801 aaPredicted RBP17.11■□□□□ 0.33
CDC27-209ENST00000532893 SLC3A2P08195 630 aaKnown RBP17.11■□□□□ 0.33
CDC27-209ENST00000532893 ALDH5A1P51649 535 aaPredicted RBP17.11■□□□□ 0.33
CDC27-209ENST00000532893 OR6J1Q8NGC5 347 aa17.11■□□□□ 0.33
CDC27-209ENST00000532893 NACAP1Q9BZK3 213 aa17.11■□□□□ 0.33
CDC27-209ENST00000532893 ADD3Q9UEY8 706 aaKnown RBP17.11■□□□□ 0.33
CDC27-209ENST00000532893 SCN5AQ14524 2016 aa17.11■□□□□ 0.33
CDC27-209ENST00000532893 PITPNM1O00562 1244 aa17.1■□□□□ 0.33
CDC27-209ENST00000532893 NMT2O60551 498 aa17.1■□□□□ 0.33
CDC27-209ENST00000532893 LPXNO60711 386 aa17.1■□□□□ 0.33
CDC27-209ENST00000532893 GPR37L1O60883 481 aa17.1■□□□□ 0.33
CDC27-209ENST00000532893 ICAM1P05362 532 aa17.1■□□□□ 0.33
CDC27-209ENST00000532893 PPARAQ07869 468 aa17.1■□□□□ 0.33
CDC27-209ENST00000532893 BRDTQ58F21 947 aaPredicted RBP17.1■□□□□ 0.33
CDC27-209ENST00000532893 SEC62Q99442 399 aaKnown RBP17.1■□□□□ 0.33
CDC27-209ENST00000532893 NAPBQ9H115 298 aa17.1■□□□□ 0.33
CDC27-209ENST00000532893 C11orf16Q9NQ32 467 aa17.1■□□□□ 0.33
CDC27-209ENST00000532893 INCENPQ9NQS7 918 aa17.1■□□□□ 0.33
CDC27-209ENST00000532893 BRWD1Q9NSI6 2320 aa17.1■□□□□ 0.33
CDC27-209ENST00000532893 PIEZO1Q92508 2521 aa17.09■□□□□ 0.33
CDC27-209ENST00000532893 RBM47A0AV96 593 aaKnown RBP17.09■□□□□ 0.33
CDC27-209ENST00000532893 PTPDC1A2A3K4 754 aa17.09■□□□□ 0.33
CDC27-209ENST00000532893 NFIBO00712 420 aa17.09■□□□□ 0.33
CDC27-209ENST00000532893 SLC16A2P36021 539 aa17.09■□□□□ 0.33
CDC27-209ENST00000532893 CHMP4BP1P59074 171 aa17.09■□□□□ 0.33
CDC27-209ENST00000532893 BFSP2Q13515 415 aa17.09■□□□□ 0.33
CDC27-209ENST00000532893 PPP4R3BQ5MIZ7 849 aa17.09■□□□□ 0.33
CDC27-209ENST00000532893 NFRKBQ6P4R8 1299 aa17.09■□□□□ 0.33
CDC27-209ENST00000532893 CD320Q9NPF0 282 aa17.09■□□□□ 0.33
CDC27-209ENST00000532893 IL17RBQ9NRM6 502 aa17.09■□□□□ 0.33
CDC27-209ENST00000532893 MUC6Q6W4X9 2439 aa17.09■□□□□ 0.33
CDC27-209ENST00000532893 TET1Q8NFU7 2136 aa17.08■□□□□ 0.33
CDC27-209ENST00000532893 TSPY2A6NKD2 308 aa17.08■□□□□ 0.32
CDC27-209ENST00000532893 KCNJ6P48051 423 aa17.08■□□□□ 0.32
CDC27-209ENST00000532893 CCDC96Q2M329 555 aa17.08■□□□□ 0.32
CDC27-209ENST00000532893 TTBK2Q6IQ55 1244 aa17.08■□□□□ 0.32
CDC27-209ENST00000532893 TMCO2Q7Z6W1 182 aaPredicted RBP17.08■□□□□ 0.32
CDC27-209ENST00000532893 COPS5Q92905 334 aa17.08■□□□□ 0.32
CDC27-209ENST00000532893 GPATCH3Q96I76 525 aa17.08■□□□□ 0.32
CDC27-209ENST00000532893 CHMP4BQ9H444 224 aaKnown RBP17.08■□□□□ 0.32
CDC27-209ENST00000532893 NOD1Q9Y239 953 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms