RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 CRHR2Q13324 411 aa16.41■□□□□ 0.22
COL16A1-217ENST00000532877 SAFBQ15424 915 aaKnown RBP eCLIP16.41■□□□□ 0.22
COL16A1-217ENST00000532877 FAM110CQ1W6H9 321 aa16.41■□□□□ 0.22
COL16A1-217ENST00000532877 GALNT17Q6IS24 598 aa16.41■□□□□ 0.22
COL16A1-217ENST00000532877 GPRC5AQ8NFJ5 357 aa16.41■□□□□ 0.22
COL16A1-217ENST00000532877 OXER1Q8TDS5 423 aa16.41■□□□□ 0.22
COL16A1-217ENST00000532877 CUL5Q93034 780 aa16.41■□□□□ 0.22
COL16A1-217ENST00000532877 PSTPIP2Q9H939 334 aa16.41■□□□□ 0.22
COL16A1-217ENST00000532877 ZFYVE28Q9HCC9 887 aa16.41■□□□□ 0.22
COL16A1-217ENST00000532877 BRMS1Q9HCU9 246 aa16.41■□□□□ 0.22
COL16A1-217ENST00000532877 CHMP5Q9NZZ3 219 aa16.41■□□□□ 0.22
COL16A1-217ENST00000532877 ZDHHC9Q9Y397 364 aa16.41■□□□□ 0.22
COL16A1-217ENST00000532877 KIF28PB7ZC32 967 aa16.4■□□□□ 0.22
COL16A1-217ENST00000532877 TLR2O60603 784 aa16.4■□□□□ 0.22
COL16A1-217ENST00000532877 ZSCAN22P10073 491 aaPredicted RBP16.4■□□□□ 0.22
COL16A1-217ENST00000532877 BCRP11274 1271 aa16.4■□□□□ 0.22
COL16A1-217ENST00000532877 COPB2P35606 906 aa16.4■□□□□ 0.22
COL16A1-217ENST00000532877 NUCB2P80303 420 aa16.4■□□□□ 0.22
COL16A1-217ENST00000532877 Q3C1V9 767 aa16.4■□□□□ 0.22
COL16A1-217ENST00000532877 MCTP1Q6DN14 999 aa16.4■□□□□ 0.22
COL16A1-217ENST00000532877 BLIDQ8IZY5 108 aa16.4■□□□□ 0.22
COL16A1-217ENST00000532877 BICD2Q8TD16 824 aa16.4■□□□□ 0.22
COL16A1-217ENST00000532877 GLT8D2Q9H1C3 349 aa16.4■□□□□ 0.22
COL16A1-217ENST00000532877 ACAD9Q9H845 621 aa16.4■□□□□ 0.22
COL16A1-217ENST00000532877 CPA4Q9UI42 421 aa16.4■□□□□ 0.22
COL16A1-217ENST00000532877 BTBD18B2RXH4 712 aa16.39■□□□□ 0.21
COL16A1-217ENST00000532877 M0R2N6 131 aa16.39■□□□□ 0.21
COL16A1-217ENST00000532877 MEIS2O14770 477 aa16.39■□□□□ 0.21
COL16A1-217ENST00000532877 SLC25A27O95847 323 aa16.39■□□□□ 0.21
COL16A1-217ENST00000532877 ERCC3P19447 782 aa16.39■□□□□ 0.21
COL16A1-217ENST00000532877 MRPL12P52815 198 aaKnown RBP16.39■□□□□ 0.21
COL16A1-217ENST00000532877 CCNA1P78396 465 aa16.39■□□□□ 0.21
COL16A1-217ENST00000532877 GHRHRQ02643 423 aa16.39■□□□□ 0.21
COL16A1-217ENST00000532877 NR5A1Q13285 461 aa16.39■□□□□ 0.21
COL16A1-217ENST00000532877 UBE2SQ16763 222 aa16.39■□□□□ 0.21
COL16A1-217ENST00000532877 FOXD4L5Q5VV16 416 aaPredicted RBP16.39■□□□□ 0.21
COL16A1-217ENST00000532877 C17orf99Q6UX52 265 aa16.39■□□□□ 0.21
COL16A1-217ENST00000532877 OTOP1Q7RTM1 612 aa16.39■□□□□ 0.21
COL16A1-217ENST00000532877 FERMT3Q86UX7 667 aa16.39■□□□□ 0.21
COL16A1-217ENST00000532877 NCAPG2Q86XI2 1143 aa16.39■□□□□ 0.21
COL16A1-217ENST00000532877 REXO1Q8N1G1 1221 aaKnown RBP16.39■□□□□ 0.21
COL16A1-217ENST00000532877 SHCBP1Q8NEM2 672 aa16.39■□□□□ 0.21
COL16A1-217ENST00000532877 CHST13Q8NET6 341 aa16.39■□□□□ 0.21
COL16A1-217ENST00000532877 RASGRP4Q8TDF6 673 aa16.39■□□□□ 0.21
COL16A1-217ENST00000532877 FOXD4L4Q8WXT5 416 aaPredicted RBP16.39■□□□□ 0.21
COL16A1-217ENST00000532877 FOXP1Q9H334 677 aaPredicted RBP16.39■□□□□ 0.21
COL16A1-217ENST00000532877 PIK3CDO00329 1044 aa16.38■□□□□ 0.21
COL16A1-217ENST00000532877 F13A1P00488 732 aa16.38■□□□□ 0.21
COL16A1-217ENST00000532877 CFBP00751 764 aa16.38■□□□□ 0.21
COL16A1-217ENST00000532877 U2AF2P26368 475 aaKnown RBP eCLIP16.38■□□□□ 0.21
COL16A1-217ENST00000532877 CLK2P49760 499 aaKnown RBP16.38■□□□□ 0.21
COL16A1-217ENST00000532877 RESTQ13127 1097 aa16.38■□□□□ 0.21
COL16A1-217ENST00000532877 GNL2Q13823 731 aaKnown RBP16.38■□□□□ 0.21
COL16A1-217ENST00000532877 USP17L6PQ6QN14 398 aa16.38■□□□□ 0.21
COL16A1-217ENST00000532877 MCF2L2Q86YR7 1114 aa16.38■□□□□ 0.21
COL16A1-217ENST00000532877 TEX2Q8IWB9 1127 aa16.38■□□□□ 0.21
COL16A1-217ENST00000532877 TBC1D5Q92609 795 aa16.38■□□□□ 0.21
COL16A1-217ENST00000532877 TNFRSF25Q93038 417 aa16.38■□□□□ 0.21
COL16A1-217ENST00000532877 ARMC5Q96C12 935 aa16.38■□□□□ 0.21
COL16A1-217ENST00000532877 PORCNQ9H237 461 aa16.38■□□□□ 0.21
COL16A1-217ENST00000532877 FBXO40Q9UH90 709 aa16.38■□□□□ 0.21
COL16A1-217ENST00000532877 PCDHA6Q9UN73 950 aa16.38■□□□□ 0.21
COL16A1-217ENST00000532877 PCDHA8Q9Y5H6 950 aa16.38■□□□□ 0.21
COL16A1-217ENST00000532877 MYH15Q9Y2K3 1946 aa16.38■□□□□ 0.21
COL16A1-217ENST00000532877 PLXNB2O15031 1838 aa16.38■□□□□ 0.21
COL16A1-217ENST00000532877 LCTP09848 1927 aa16.37■□□□□ 0.21
COL16A1-217ENST00000532877 GCOM1H8Y6P7 765 aaPredicted RBP16.37■□□□□ 0.21
COL16A1-217ENST00000532877 POLR2MP0CAP2 368 aa16.37■□□□□ 0.21
COL16A1-217ENST00000532877 HOXA13P31271 388 aaPredicted RBP16.37■□□□□ 0.21
COL16A1-217ENST00000532877 HSD17B4P51659 736 aa16.37■□□□□ 0.21
COL16A1-217ENST00000532877 CAP1Q01518 475 aa16.37■□□□□ 0.21
COL16A1-217ENST00000532877 NSMFQ6X4W1 530 aa16.37■□□□□ 0.21
COL16A1-217ENST00000532877 SLC30A10Q6XR72 485 aa16.37■□□□□ 0.21
COL16A1-217ENST00000532877 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.37■□□□□ 0.21
COL16A1-217ENST00000532877 NOSTRINQ8IVI9 506 aa16.37■□□□□ 0.21
COL16A1-217ENST00000532877 MROH8Q9H579 483 aa16.37■□□□□ 0.21
COL16A1-217ENST00000532877 EFCC1Q9HA90 598 aa16.37■□□□□ 0.21
COL16A1-217ENST00000532877 A1CFQ9NQ94 594 aaKnown RBP16.37■□□□□ 0.21
COL16A1-217ENST00000532877 TMEM260Q9NX78 707 aa16.37■□□□□ 0.21
COL16A1-217ENST00000532877 BIN2Q9UBW5 565 aaPredicted RBP16.37■□□□□ 0.21
COL16A1-217ENST00000532877 COL6A3P12111 3177 aa16.37■□□□□ 0.21
COL16A1-217ENST00000532877 EARS2Q5JPH6 523 aaKnown RBP16.36■□□□□ 0.21
COL16A1-217ENST00000532877 JAKMIP3Q5VZ66 844 aa16.36■□□□□ 0.21
COL16A1-217ENST00000532877 RNF207Q6ZRF8 634 aa16.36■□□□□ 0.21
COL16A1-217ENST00000532877 SAMD3Q8N6K7 520 aa16.36■□□□□ 0.21
COL16A1-217ENST00000532877 MAF1Q9H063 256 aa16.36■□□□□ 0.21
COL16A1-217ENST00000532877 FAM205CA6NFA0 338 aa16.35■□□□□ 0.21
COL16A1-217ENST00000532877 RPS6P62753 249 aaKnown RBP16.35■□□□□ 0.21
COL16A1-217ENST00000532877 AP3B2Q13367 1082 aa16.35■□□□□ 0.21
COL16A1-217ENST00000532877 WDR78Q5VTH9 848 aa16.35■□□□□ 0.21
COL16A1-217ENST00000532877 KRT25Q7Z3Z0 450 aa16.35■□□□□ 0.21
COL16A1-217ENST00000532877 BRAPQ7Z569 592 aa16.35■□□□□ 0.21
COL16A1-217ENST00000532877 PGBD1Q96JS3 809 aa16.35■□□□□ 0.21
COL16A1-217ENST00000532877 ZSCAN16Q9H4T2 348 aaPredicted RBP16.35■□□□□ 0.21
COL16A1-217ENST00000532877 MAP3K20Q9NYL2 800 aaKnown RBP16.35■□□□□ 0.21
COL16A1-217ENST00000532877 CYP39A1Q9NYL5 469 aa16.35■□□□□ 0.21
COL16A1-217ENST00000532877 COL20A1Q9P218 1284 aa16.35■□□□□ 0.21
COL16A1-217ENST00000532877 PFASO15067 1338 aa16.35■□□□□ 0.21
COL16A1-217ENST00000532877 ZNF236Q9UL36 1845 aa16.34■□□□□ 0.21
COL16A1-217ENST00000532877 CCDC194A0A1B0GVG4 234 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms