RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 CHMP4BP1P59074 171 aa7.1□□□□□ -1.27
AMBRA1-209ENST00000529963 ARHGAP27Q6ZUM4 889 aa7.1□□□□□ -1.27
AMBRA1-209ENST00000529963 OR6P1Q8NGX9 317 aa7.1□□□□□ -1.27
AMBRA1-209ENST00000529963 METTL22Q9BUU2 404 aaPredicted RBP7.1□□□□□ -1.27
AMBRA1-209ENST00000529963 PIM2Q9P1W9 311 aa7.1□□□□□ -1.27
AMBRA1-209ENST00000529963 GTF2IRD1Q9UHL9 959 aa7.1□□□□□ -1.27
AMBRA1-209ENST00000529963 CLEC3AO75596 197 aa7.09□□□□□ -1.27
AMBRA1-209ENST00000529963 STK10O94804 968 aaKnown RBP7.09□□□□□ -1.27
AMBRA1-209ENST00000529963 TP53P04637 393 aaPredicted RBP7.09□□□□□ -1.27
AMBRA1-209ENST00000529963 OXCT1P55809 520 aa7.09□□□□□ -1.27
AMBRA1-209ENST00000529963 SF3A1Q15459 793 aaKnown RBP7.09□□□□□ -1.27
AMBRA1-209ENST00000529963 DDB1Q16531 1140 aa7.09□□□□□ -1.27
AMBRA1-209ENST00000529963 SFRP5Q5T4F7 317 aa7.09□□□□□ -1.27
AMBRA1-209ENST00000529963 LARP1BQ659C4 914 aaKnown RBP7.09□□□□□ -1.27
AMBRA1-209ENST00000529963 INTS3Q68E01 1043 aaKnown RBP7.09□□□□□ -1.27
AMBRA1-209ENST00000529963 TOM1L2Q6ZVM7 507 aa7.09□□□□□ -1.27
AMBRA1-209ENST00000529963 DNAJC2Q99543 621 aaKnown RBP7.09□□□□□ -1.27
AMBRA1-209ENST00000529963 PRKAG3Q9UGI9 489 aa7.09□□□□□ -1.27
AMBRA1-209ENST00000529963 QRICH2Q9H0J4 1663 aa7.09□□□□□ -1.27
AMBRA1-209ENST00000529963 PARP4Q9UKK3 1724 aaKnown RBP7.09□□□□□ -1.27
AMBRA1-209ENST00000529963 SLIT3O75094 1523 aa7.09□□□□□ -1.27
AMBRA1-209ENST00000529963 C9IYK1 514 aa7.08□□□□□ -1.28
AMBRA1-209ENST00000529963 ADAM23O75077 832 aa7.08□□□□□ -1.28
AMBRA1-209ENST00000529963 ETV3P41162 512 aa7.08□□□□□ -1.28
AMBRA1-209ENST00000529963 PPFIBP1Q86W92 1011 aa7.08□□□□□ -1.28
AMBRA1-209ENST00000529963 PLD6Q8N2A8 252 aaKnown RBP7.08□□□□□ -1.28
AMBRA1-209ENST00000529963 TAB3Q8N5C8 712 aaPredicted RBP7.08□□□□□ -1.28
AMBRA1-209ENST00000529963 KCNH5Q8NCM2 988 aa7.08□□□□□ -1.28
AMBRA1-209ENST00000529963 ZC3H7BQ9UGR2 993 aaKnown RBP7.08□□□□□ -1.28
AMBRA1-209ENST00000529963 MAPK8IP1Q9UQF2 711 aa7.08□□□□□ -1.28
AMBRA1-209ENST00000529963 WDR17Q8IZU2 1322 aa7.08□□□□□ -1.28
AMBRA1-209ENST00000529963 ROCK2O75116 1388 aaKnown RBP7.08□□□□□ -1.28
AMBRA1-209ENST00000529963 PRELPP51888 382 aa7.07□□□□□ -1.28
AMBRA1-209ENST00000529963 ZNF746Q6NUN9 644 aaPredicted RBP7.07□□□□□ -1.28
AMBRA1-209ENST00000529963 MICAL1Q8TDZ2 1067 aa7.07□□□□□ -1.28
AMBRA1-209ENST00000529963 Q96M66 194 aa7.07□□□□□ -1.28
AMBRA1-209ENST00000529963 DRC1Q96MC2 740 aa7.07□□□□□ -1.28
AMBRA1-209ENST00000529963 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.07□□□□□ -1.28
AMBRA1-209ENST00000529963 ST7Q9NRC1 585 aa7.07□□□□□ -1.28
AMBRA1-209ENST00000529963 ACTR10Q9NZ32 417 aa7.07□□□□□ -1.28
AMBRA1-209ENST00000529963 PLAGL2Q9UPG8 496 aa7.07□□□□□ -1.28
AMBRA1-209ENST00000529963 TTC21BQ7Z4L5 1316 aa7.07□□□□□ -1.28
AMBRA1-209ENST00000529963 TTC21AQ8NDW8 1320 aa7.07□□□□□ -1.28
AMBRA1-209ENST00000529963 CPSF1Q10570 1443 aaKnown RBP7.07□□□□□ -1.28
AMBRA1-209ENST00000529963 TRPM1Q7Z4N2 1603 aa7.07□□□□□ -1.28
AMBRA1-209ENST00000529963 GNAT3A8MTJ3 354 aa7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 B2RBV5 119 aa7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 PLSCR1O15162 318 aa7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 MED26O95402 600 aa7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 FOSL1P15407 271 aa7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 CYP7A1P22680 504 aa7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 SSTR4P31391 388 aa7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 CASP7P55210 303 aa7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 GPR162Q16538 588 aa7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 NBPF12Q5TAG4 269 aaPredicted RBP7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 CDKAL1Q5VV42 579 aa7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 ARHGEF25Q86VW2 580 aa7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 CELF2-AS1Q8N7Q2 184 aa7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 VWCEQ96DN2 955 aa7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 SYT17Q9BSW7 474 aa7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 MKRN2Q9H000 416 aaKnown RBP7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 LRRC37A3O60309 1634 aa7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 PIK3C2AO00443 1686 aa7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 WASH4PA8MWX3 477 aa7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 FAM155AB1AL88 458 aaPredicted RBP7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 CCNFP41002 786 aa7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 TNK2Q07912 1038 aa7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 SNW1Q13573 536 aaKnown RBP7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 NKPD1Q17RQ9 610 aa7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 GNPTABQ3T906 1256 aa7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 TNNI3KQ59H18 835 aa7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 DCAF15Q66K64 600 aa7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 MFSD4AQ8N468 514 aa7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 C19orf47Q8N9M1 422 aaKnown RBP7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 RNF141Q8WVD5 230 aa7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 SUCOQ9UBS9 1254 aaKnown RBP7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 R3HCC1Q9Y3T6 440 aaKnown RBP7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 CAPN6Q9Y6Q1 641 aa7.06□□□□□ -1.28
AMBRA1-209ENST00000529963 BCL9O00512 1426 aa7.05□□□□□ -1.28
AMBRA1-209ENST00000529963 MYOM1P52179 1685 aa7.05□□□□□ -1.28
AMBRA1-209ENST00000529963 PEAK1Q9H792 1746 aa7.05□□□□□ -1.28
AMBRA1-209ENST00000529963 RGPD3A6NKT7 1758 aaPredicted RBP7.05□□□□□ -1.28
AMBRA1-209ENST00000529963 RGPD4Q7Z3J3 1758 aa7.05□□□□□ -1.28
AMBRA1-209ENST00000529963 IGF2BP3O00425 579 aaKnown RBP eCLIP7.05□□□□□ -1.28
AMBRA1-209ENST00000529963 EXOC5O00471 708 aa7.05□□□□□ -1.28
AMBRA1-209ENST00000529963 KLF4O43474 513 aa7.05□□□□□ -1.28
AMBRA1-209ENST00000529963 CEACAM5P06731 702 aa7.05□□□□□ -1.28
AMBRA1-209ENST00000529963 PMS1P54277 932 aaKnown RBP7.05□□□□□ -1.28
AMBRA1-209ENST00000529963 C6orf15Q6UXA7 325 aaPredicted RBP7.05□□□□□ -1.28
AMBRA1-209ENST00000529963 SLC51AQ86UW1 340 aa7.05□□□□□ -1.28
AMBRA1-209ENST00000529963 MARCH10Q8NA82 808 aaPredicted RBP7.05□□□□□ -1.28
AMBRA1-209ENST00000529963 DHRS1Q96LJ7 313 aa7.05□□□□□ -1.28
AMBRA1-209ENST00000529963 SIN3AQ96ST3 1273 aa7.05□□□□□ -1.28
AMBRA1-209ENST00000529963 ZNF214Q9UL59 606 aaPredicted RBP7.05□□□□□ -1.28
AMBRA1-209ENST00000529963 KTN1Q86UP2 1357 aaKnown RBP7.05□□□□□ -1.28
AMBRA1-209ENST00000529963 CCDC7Q96M83 1385 aa7.05□□□□□ -1.28
AMBRA1-209ENST00000529963 COL18A1P39060 1754 aa7.04□□□□□ -1.28
AMBRA1-209ENST00000529963 AXDND1Q5T1B0 1012 aaPredicted RBP7.04□□□□□ -1.28
AMBRA1-209ENST00000529963 KIAA1211LQ6NV74 962 aa7.04□□□□□ -1.28
AMBRA1-209ENST00000529963 VHLLQ6RSH7 139 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms