RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 CERS4Q9HA82 394 aa13.62□□□□□ -0.23
TRAPPC9-203ENST00000517667 GPHNQ9NQX3 736 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC9-203ENST00000517667 PDGFCQ9NRA1 345 aa13.62□□□□□ -0.23
TRAPPC9-203ENST00000517667 CYP39A1Q9NYL5 469 aa13.62□□□□□ -0.23
TRAPPC9-203ENST00000517667 ADD3Q9UEY8 706 aaKnown RBP13.62□□□□□ -0.23
TRAPPC9-203ENST00000517667 DDX19BQ9UMR2 479 aa13.62□□□□□ -0.23
TRAPPC9-203ENST00000517667 PIEZO1Q92508 2521 aa13.62□□□□□ -0.23
TRAPPC9-203ENST00000517667 RAD50Q92878 1312 aa13.62□□□□□ -0.23
TRAPPC9-203ENST00000517667 BAIAP3O94812 1187 aa13.61□□□□□ -0.23
TRAPPC9-203ENST00000517667 ZFYP08048 801 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC9-203ENST00000517667 SLC3A2P08195 630 aaKnown RBP13.61□□□□□ -0.23
TRAPPC9-203ENST00000517667 CYP2C9P11712 490 aa13.61□□□□□ -0.23
TRAPPC9-203ENST00000517667 TAP1Q03518 808 aa13.61□□□□□ -0.23
TRAPPC9-203ENST00000517667 HERC6Q8IVU3 1022 aa13.61□□□□□ -0.23
TRAPPC9-203ENST00000517667 SIRT2Q8IXJ6 389 aa13.61□□□□□ -0.23
TRAPPC9-203ENST00000517667 KBTBD3Q8NAB2 608 aa13.61□□□□□ -0.23
TRAPPC9-203ENST00000517667 NEDD1Q8NHV4 660 aa13.61□□□□□ -0.23
TRAPPC9-203ENST00000517667 CHMP4BQ9H444 224 aaKnown RBP13.61□□□□□ -0.23
TRAPPC9-203ENST00000517667 PTPRSQ13332 1948 aa13.6□□□□□ -0.23
TRAPPC9-203ENST00000517667 EPOPA6NHQ4 379 aa13.6□□□□□ -0.23
TRAPPC9-203ENST00000517667 GPAA1O43292 621 aa13.6□□□□□ -0.23
TRAPPC9-203ENST00000517667 APPP05067 770 aa13.6□□□□□ -0.23
TRAPPC9-203ENST00000517667 PTGS1P23219 599 aa13.6□□□□□ -0.23
TRAPPC9-203ENST00000517667 PTPN11Q06124 597 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC9-203ENST00000517667 BFSP2Q13515 415 aa13.6□□□□□ -0.23
TRAPPC9-203ENST00000517667 LRRFIP1Q32MZ4 808 aaKnown RBP13.6□□□□□ -0.23
TRAPPC9-203ENST00000517667 FAM47CQ5HY64 1035 aa13.6□□□□□ -0.23
TRAPPC9-203ENST00000517667 NFRKBQ6P4R8 1299 aa13.6□□□□□ -0.23
TRAPPC9-203ENST00000517667 RETREG2Q8NC44 543 aa13.6□□□□□ -0.23
TRAPPC9-203ENST00000517667 OSBP2Q969R2 916 aa13.6□□□□□ -0.23
TRAPPC9-203ENST00000517667 MTG1Q9BT17 334 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC9-203ENST00000517667 WDR11Q9BZH6 1224 aa13.6□□□□□ -0.23
TRAPPC9-203ENST00000517667 NACAP1Q9BZK3 213 aa13.6□□□□□ -0.23
TRAPPC9-203ENST00000517667 LRRCC1Q9C099 1032 aa13.6□□□□□ -0.23
TRAPPC9-203ENST00000517667 FTOQ9C0B1 505 aaKnown RBP eCLIP13.6□□□□□ -0.23
TRAPPC9-203ENST00000517667 EPB41L4AQ9HCS5 686 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC9-203ENST00000517667 LMCD1Q9NZU5 365 aa13.6□□□□□ -0.23
TRAPPC9-203ENST00000517667 RNF113AO15541 343 aaKnown RBP13.59□□□□□ -0.23
TRAPPC9-203ENST00000517667 KPNA6O60684 536 aa13.59□□□□□ -0.23
TRAPPC9-203ENST00000517667 ICAM1P05362 532 aa13.59□□□□□ -0.23
TRAPPC9-203ENST00000517667 MYL3P08590 195 aa13.59□□□□□ -0.23
TRAPPC9-203ENST00000517667 IQCF3P0C7M6 154 aa13.59□□□□□ -0.23
TRAPPC9-203ENST00000517667 KCNJ6P48051 423 aa13.59□□□□□ -0.23
TRAPPC9-203ENST00000517667 GRB10Q13322 594 aa13.59□□□□□ -0.23
TRAPPC9-203ENST00000517667 MUM1L1Q5H9M0 696 aa13.59□□□□□ -0.23
TRAPPC9-203ENST00000517667 KRT40Q6A162 431 aa13.59□□□□□ -0.23
TRAPPC9-203ENST00000517667 NSMFQ6X4W1 530 aa13.59□□□□□ -0.23
TRAPPC9-203ENST00000517667 CCDC155Q8N6L0 562 aa13.59□□□□□ -0.23
TRAPPC9-203ENST00000517667 MPHOSPH6Q99547 160 aaKnown RBP13.59□□□□□ -0.23
TRAPPC9-203ENST00000517667 ECHDC1Q9NTX5 307 aa13.59□□□□□ -0.23
TRAPPC9-203ENST00000517667 ZBTB40Q9NUA8 1239 aa13.59□□□□□ -0.23
TRAPPC9-203ENST00000517667 CCPG1Q9ULG6 757 aa13.59□□□□□ -0.23
TRAPPC9-203ENST00000517667 DDX49Q9Y6V7 483 aaKnown RBP13.59□□□□□ -0.23
TRAPPC9-203ENST00000517667 MUC6Q6W4X9 2439 aa13.59□□□□□ -0.23
TRAPPC9-203ENST00000517667 RBM47A0AV96 593 aaKnown RBP13.58□□□□□ -0.24
TRAPPC9-203ENST00000517667 PATL2C9JE40 543 aaKnown RBP13.58□□□□□ -0.24
TRAPPC9-203ENST00000517667 PI4K2BG5E9Z4 385 aa13.58□□□□□ -0.24
TRAPPC9-203ENST00000517667 NKRFO15226 690 aaKnown RBP eCLIP13.58□□□□□ -0.24
TRAPPC9-203ENST00000517667 MCCP23508 829 aa13.58□□□□□ -0.24
TRAPPC9-203ENST00000517667 ALDH5A1P51649 535 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC9-203ENST00000517667 TFAP4Q01664 338 aa13.58□□□□□ -0.24
TRAPPC9-203ENST00000517667 NBPF20Q3BBV1 942 aa13.58□□□□□ -0.24
TRAPPC9-203ENST00000517667 TMEM63BQ5T3F8 832 aa13.58□□□□□ -0.24
TRAPPC9-203ENST00000517667 RCSD1Q6JBY9 416 aa13.58□□□□□ -0.24
TRAPPC9-203ENST00000517667 IFNL3Q8IZI9 196 aa13.58□□□□□ -0.24
TRAPPC9-203ENST00000517667 OR6J1Q8NGC5 347 aa13.58□□□□□ -0.24
TRAPPC9-203ENST00000517667 GPATCH3Q96I76 525 aa13.58□□□□□ -0.24
TRAPPC9-203ENST00000517667 C11orf16Q9NQ32 467 aa13.58□□□□□ -0.24
TRAPPC9-203ENST00000517667 PRR12Q9ULL5 1215 aa13.58□□□□□ -0.24
TRAPPC9-203ENST00000517667 STX8Q9UNK0 236 aa13.58□□□□□ -0.24
TRAPPC9-203ENST00000517667 NOD1Q9Y239 953 aa13.58□□□□□ -0.24
TRAPPC9-203ENST00000517667 SIP14410 1827 aa13.57□□□□□ -0.24
TRAPPC9-203ENST00000517667 LPXNO60711 386 aa13.57□□□□□ -0.24
TRAPPC9-203ENST00000517667 PPP2R5BQ15173 497 aa13.57□□□□□ -0.24
TRAPPC9-203ENST00000517667 KCTD1Q719H9 257 aa13.57□□□□□ -0.24
TRAPPC9-203ENST00000517667 BRWD1Q9NSI6 2320 aa13.56□□□□□ -0.24
TRAPPC9-203ENST00000517667 A6NJR5 290 aa13.56□□□□□ -0.24
TRAPPC9-203ENST00000517667 PRR33A8MZF0 331 aa13.56□□□□□ -0.24
TRAPPC9-203ENST00000517667 ARHGEF15O94989 841 aa13.56□□□□□ -0.24
TRAPPC9-203ENST00000517667 PARNO95453 639 aaKnown RBP13.56□□□□□ -0.24
TRAPPC9-203ENST00000517667 PPARAQ07869 468 aa13.56□□□□□ -0.24
TRAPPC9-203ENST00000517667 TET1Q8NFU7 2136 aa13.56□□□□□ -0.24
TRAPPC9-203ENST00000517667 CAGE1Q8TC20 777 aa13.56□□□□□ -0.24
TRAPPC9-203ENST00000517667 AFAP1L1Q8TED9 768 aa13.56□□□□□ -0.24
TRAPPC9-203ENST00000517667 SCFD2Q8WU76 684 aa13.56□□□□□ -0.24
TRAPPC9-203ENST00000517667 NAPBQ9H115 298 aa13.56□□□□□ -0.24
TRAPPC9-203ENST00000517667 PNMA2Q9UL42 364 aa13.56□□□□□ -0.24
TRAPPC9-203ENST00000517667 TRIP12Q14669 1992 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC9-203ENST00000517667 PTPDC1A2A3K4 754 aa13.55□□□□□ -0.24
TRAPPC9-203ENST00000517667 FAM86C2PA6NEL3 165 aa13.55□□□□□ -0.24
TRAPPC9-203ENST00000517667 TSPY2A6NKD2 308 aa13.55□□□□□ -0.24
TRAPPC9-203ENST00000517667 B4DLN1 442 aa13.55□□□□□ -0.24
TRAPPC9-203ENST00000517667 M0R2C6 588 aa13.55□□□□□ -0.24
TRAPPC9-203ENST00000517667 MRPL12P52815 198 aaKnown RBP13.55□□□□□ -0.24
TRAPPC9-203ENST00000517667 WDR5P61964 334 aaKnown RBP13.55□□□□□ -0.24
TRAPPC9-203ENST00000517667 HNRNPUQ00839 825 aaKnown RBP eCLIP13.55□□□□□ -0.24
TRAPPC9-203ENST00000517667 PDE4DQ08499 809 aa13.55□□□□□ -0.24
TRAPPC9-203ENST00000517667 BAATQ14032 418 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC9-203ENST00000517667 DCAF4Q8WV16 495 aa13.55□□□□□ -0.24
TRAPPC9-203ENST00000517667 KHSRPQ92945 711 aaKnown RBP eCLIP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms