RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 TMEM63BQ5T3F8 832 aa13.87□□□□□ -0.19
CDK9-205ENST00000498339 TAPT1Q6NXT6 567 aa13.87□□□□□ -0.19
CDK9-205ENST00000498339 HERC6Q8IVU3 1022 aa13.87□□□□□ -0.19
CDK9-205ENST00000498339 OR6J1Q8NGC5 347 aa13.87□□□□□ -0.19
CDK9-205ENST00000498339 SYNPO2Q9UMS6 1093 aa13.87□□□□□ -0.19
CDK9-205ENST00000498339 MTMR7Q9Y216 660 aa13.87□□□□□ -0.19
CDK9-205ENST00000498339 Q9Y3F1 56 aa13.87□□□□□ -0.19
CDK9-205ENST00000498339 RAD50Q92878 1312 aa13.87□□□□□ -0.19
CDK9-205ENST00000498339 ARHGEF15O94989 841 aa13.86□□□□□ -0.19
CDK9-205ENST00000498339 BRDTQ58F21 947 aaPredicted RBP13.86□□□□□ -0.19
CDK9-205ENST00000498339 MUM1L1Q5H9M0 696 aa13.86□□□□□ -0.19
CDK9-205ENST00000498339 GIMAP6Q6P9H5 292 aa13.86□□□□□ -0.19
CDK9-205ENST00000498339 PHOSPHO2Q8TCD6 241 aa13.86□□□□□ -0.19
CDK9-205ENST00000498339 GDPD5Q8WTR4 605 aa13.86□□□□□ -0.19
CDK9-205ENST00000498339 PPP1R13LQ8WUF5 828 aa13.86□□□□□ -0.19
CDK9-205ENST00000498339 MKL1Q969V6 931 aa13.86□□□□□ -0.19
CDK9-205ENST00000498339 VWCEQ96DN2 955 aa13.86□□□□□ -0.19
CDK9-205ENST00000498339 MTG1Q9BT17 334 aaPredicted RBP13.86□□□□□ -0.19
CDK9-205ENST00000498339 CYP39A1Q9NYL5 469 aa13.86□□□□□ -0.19
CDK9-205ENST00000498339 CCPG1Q9ULG6 757 aa13.86□□□□□ -0.19
CDK9-205ENST00000498339 ZNF536O15090 1300 aa13.86□□□□□ -0.19
CDK9-205ENST00000498339 PLIN4Q96Q06 1357 aa13.85□□□□□ -0.19
CDK9-205ENST00000498339 GPR37L1O60883 481 aa13.85□□□□□ -0.19
CDK9-205ENST00000498339 MCCP23508 829 aa13.85□□□□□ -0.19
CDK9-205ENST00000498339 PURAQ00577 322 aaKnown RBP13.85□□□□□ -0.19
CDK9-205ENST00000498339 PDE4BQ07343 736 aa13.85□□□□□ -0.19
CDK9-205ENST00000498339 DUSP28Q4G0W2 176 aa13.85□□□□□ -0.19
CDK9-205ENST00000498339 KCTD1Q719H9 257 aa13.85□□□□□ -0.19
CDK9-205ENST00000498339 ALYREFQ86V81 257 aaKnown RBP13.85□□□□□ -0.19
CDK9-205ENST00000498339 STAG1Q8WVM7 1258 aa13.85□□□□□ -0.19
CDK9-205ENST00000498339 APPBP2Q92624 585 aa13.85□□□□□ -0.19
CDK9-205ENST00000498339 KHSRPQ92945 711 aaKnown RBP eCLIP13.85□□□□□ -0.19
CDK9-205ENST00000498339 UIMC1Q96RL1 719 aa13.85□□□□□ -0.19
CDK9-205ENST00000498339 ZBED2Q9BTP6 218 aa13.85□□□□□ -0.19
CDK9-205ENST00000498339 WDR11Q9BZH6 1224 aa13.85□□□□□ -0.19
CDK9-205ENST00000498339 EPB41L4AQ9HCS5 686 aaPredicted RBP13.85□□□□□ -0.19
CDK9-205ENST00000498339 MTUS1Q9ULD2 1270 aa13.85□□□□□ -0.19
CDK9-205ENST00000498339 CCER2I3L3R5 266 aa13.84□□□□□ -0.19
CDK9-205ENST00000498339 GPAA1O43292 621 aa13.84□□□□□ -0.19
CDK9-205ENST00000498339 SLC3A2P08195 630 aaKnown RBP13.84□□□□□ -0.19
CDK9-205ENST00000498339 GNAT2P19087 354 aa13.84□□□□□ -0.19
CDK9-205ENST00000498339 SSTR3P32745 418 aaPredicted RBP13.84□□□□□ -0.19
CDK9-205ENST00000498339 ALDH5A1P51649 535 aaPredicted RBP13.84□□□□□ -0.19
CDK9-205ENST00000498339 BFSP2Q13515 415 aa13.84□□□□□ -0.19
CDK9-205ENST00000498339 CCDC96Q2M329 555 aa13.84□□□□□ -0.19
CDK9-205ENST00000498339 NBPF20Q3BBV1 942 aa13.84□□□□□ -0.19
CDK9-205ENST00000498339 SPRED2Q7Z698 418 aa13.84□□□□□ -0.19
CDK9-205ENST00000498339 GMCL1Q96IK5 515 aa13.84□□□□□ -0.19
CDK9-205ENST00000498339 PURBQ96QR8 312 aaKnown RBP13.84□□□□□ -0.19
CDK9-205ENST00000498339 C11orf16Q9NQ32 467 aa13.84□□□□□ -0.19
CDK9-205ENST00000498339 ADD3Q9UEY8 706 aaKnown RBP13.84□□□□□ -0.19
CDK9-205ENST00000498339 STX8Q9UNK0 236 aa13.84□□□□□ -0.19
CDK9-205ENST00000498339 BRWD1Q9NSI6 2320 aa13.83□□□□□ -0.2
CDK9-205ENST00000498339 PTPDC1A2A3K4 754 aa13.83□□□□□ -0.2
CDK9-205ENST00000498339 PITPNM1O00562 1244 aa13.83□□□□□ -0.2
CDK9-205ENST00000498339 BAIAP3O94812 1187 aa13.83□□□□□ -0.2
CDK9-205ENST00000498339 IQCF3P0C7M6 154 aa13.83□□□□□ -0.2
CDK9-205ENST00000498339 TFAP4Q01664 338 aa13.83□□□□□ -0.2
CDK9-205ENST00000498339 PPP2R5BQ15173 497 aa13.83□□□□□ -0.2
CDK9-205ENST00000498339 CCDC155Q8N6L0 562 aa13.83□□□□□ -0.2
CDK9-205ENST00000498339 NEDD1Q8NHV4 660 aa13.83□□□□□ -0.2
CDK9-205ENST00000498339 OSBP2Q969R2 916 aa13.83□□□□□ -0.2
CDK9-205ENST00000498339 CRBNQ96SW2 442 aa13.83□□□□□ -0.2
CDK9-205ENST00000498339 NACAP1Q9BZK3 213 aa13.83□□□□□ -0.2
CDK9-205ENST00000498339 PRR12Q9ULL5 1215 aa13.83□□□□□ -0.2
CDK9-205ENST00000498339 LCHNA4D1U4 455 aa13.82□□□□□ -0.2
CDK9-205ENST00000498339 SMARCA5O60264 1052 aaPredicted RBP13.82□□□□□ -0.2
CDK9-205ENST00000498339 MS4A1P11836 297 aa13.82□□□□□ -0.2
CDK9-205ENST00000498339 CSPP1Q1MSJ5 1256 aa13.82□□□□□ -0.2
CDK9-205ENST00000498339 PPP4R3BQ5MIZ7 849 aa13.82□□□□□ -0.2
CDK9-205ENST00000498339 NFRKBQ6P4R8 1299 aa13.82□□□□□ -0.2
CDK9-205ENST00000498339 TMCO2Q7Z6W1 182 aaPredicted RBP13.82□□□□□ -0.2
CDK9-205ENST00000498339 SIRT2Q8IXJ6 389 aa13.82□□□□□ -0.2
CDK9-205ENST00000498339 GPATCH3Q96I76 525 aa13.82□□□□□ -0.2
CDK9-205ENST00000498339 MPHOSPH6Q99547 160 aaKnown RBP13.82□□□□□ -0.2
CDK9-205ENST00000498339 LRRCC1Q9C099 1032 aa13.82□□□□□ -0.2
CDK9-205ENST00000498339 MUC6Q6W4X9 2439 aa13.82□□□□□ -0.2
CDK9-205ENST00000498339 TSPY2A6NKD2 308 aa13.81□□□□□ -0.2
CDK9-205ENST00000498339 PI4K2BG5E9Z4 385 aa13.81□□□□□ -0.2
CDK9-205ENST00000498339 M0R2C6 588 aa13.81□□□□□ -0.2
CDK9-205ENST00000498339 RNF113AO15541 343 aaKnown RBP13.81□□□□□ -0.2
CDK9-205ENST00000498339 ICAM1P05362 532 aa13.81□□□□□ -0.2
CDK9-205ENST00000498339 CALML3P27482 149 aa13.81□□□□□ -0.2
CDK9-205ENST00000498339 WDR5P61964 334 aaKnown RBP13.81□□□□□ -0.2
CDK9-205ENST00000498339 HNRNPUQ00839 825 aaKnown RBP eCLIP13.81□□□□□ -0.2
CDK9-205ENST00000498339 PDE4DQ08499 809 aa13.81□□□□□ -0.2
CDK9-205ENST00000498339 BAATQ14032 418 aaPredicted RBP13.81□□□□□ -0.2
CDK9-205ENST00000498339 RASGRP2Q7LDG7 609 aa13.81□□□□□ -0.2
CDK9-205ENST00000498339 IFNL3Q8IZI9 196 aa13.81□□□□□ -0.2
CDK9-205ENST00000498339 KBTBD3Q8NAB2 608 aa13.81□□□□□ -0.2
CDK9-205ENST00000498339 NAPBQ9H115 298 aa13.81□□□□□ -0.2
CDK9-205ENST00000498339 UBE2ZQ9H832 354 aaPredicted RBP13.81□□□□□ -0.2
CDK9-205ENST00000498339 ECHDC1Q9NTX5 307 aa13.81□□□□□ -0.2
CDK9-205ENST00000498339 DDX19BQ9UMR2 479 aa13.81□□□□□ -0.2
CDK9-205ENST00000498339 PRR33A8MZF0 331 aa13.8□□□□□ -0.2
CDK9-205ENST00000498339 PATL2C9JE40 543 aaKnown RBP13.8□□□□□ -0.2
CDK9-205ENST00000498339 NFIBO00712 420 aa13.8□□□□□ -0.2
CDK9-205ENST00000498339 LPXNO60711 386 aa13.8□□□□□ -0.2
CDK9-205ENST00000498339 ZFYP08048 801 aaPredicted RBP13.8□□□□□ -0.2
CDK9-205ENST00000498339 KCNA5P22460 613 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms