RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 CCDC69A6NI79 296 aa13.09□□□□□ -0.31
ERCC8-208ENST00000497892 TAL1P17542 331 aaPredicted RBP13.09□□□□□ -0.31
ERCC8-208ENST00000497892 ZNF792Q3KQV3 632 aa13.09□□□□□ -0.31
ERCC8-208ENST00000497892 NFXL1Q6ZNB6 911 aa13.09□□□□□ -0.31
ERCC8-208ENST00000497892 ANKRD35Q8N283 1001 aa13.09□□□□□ -0.31
ERCC8-208ENST00000497892 TCEANC2Q96MN5 208 aa13.09□□□□□ -0.31
ERCC8-208ENST00000497892 JAKMIP1Q96N16 626 aaKnown RBP13.09□□□□□ -0.31
ERCC8-208ENST00000497892 TRERF1Q96PN7 1200 aa13.09□□□□□ -0.31
ERCC8-208ENST00000497892 MYL10Q9BUA6 226 aa13.09□□□□□ -0.31
ERCC8-208ENST00000497892 LRRC2Q9BYS8 371 aa13.09□□□□□ -0.31
ERCC8-208ENST00000497892 RNF208Q9H0X6 261 aa13.09□□□□□ -0.31
ERCC8-208ENST00000497892 JMJD4Q9H9V9 463 aa13.09□□□□□ -0.31
ERCC8-208ENST00000497892 A1CFQ9NQ94 594 aaKnown RBP13.09□□□□□ -0.31
ERCC8-208ENST00000497892 RTN4Q9NQC3 1192 aaKnown RBP13.09□□□□□ -0.31
ERCC8-208ENST00000497892 DIS3Q9Y2L1 958 aaKnown RBP13.09□□□□□ -0.31
ERCC8-208ENST00000497892 PFASO15067 1338 aa13.09□□□□□ -0.31
ERCC8-208ENST00000497892 RPTORQ8N122 1335 aa13.09□□□□□ -0.31
ERCC8-208ENST00000497892 LRRC37A2A6NM11 1700 aa13.08□□□□□ -0.32
ERCC8-208ENST00000497892 DHX16O60231 1041 aaKnown RBP13.08□□□□□ -0.32
ERCC8-208ENST00000497892 GJB1P08034 283 aa13.08□□□□□ -0.32
ERCC8-208ENST00000497892 CALM1P0DP23 149 aa13.08□□□□□ -0.32
ERCC8-208ENST00000497892 CALM2P0DP24 149 aa13.08□□□□□ -0.32
ERCC8-208ENST00000497892 CALM3P0DP25 149 aa13.08□□□□□ -0.32
ERCC8-208ENST00000497892 CYP2C19P33261 490 aa13.08□□□□□ -0.32
ERCC8-208ENST00000497892 RGS19P49795 217 aa13.08□□□□□ -0.32
ERCC8-208ENST00000497892 CACNB2Q08289 660 aaPredicted RBP13.08□□□□□ -0.32
ERCC8-208ENST00000497892 SLC35G1Q2M3R5 365 aa13.08□□□□□ -0.32
ERCC8-208ENST00000497892 QRICH1Q2TAL8 776 aa13.08□□□□□ -0.32
ERCC8-208ENST00000497892 MUM1L1Q5H9M0 696 aa13.08□□□□□ -0.32
ERCC8-208ENST00000497892 MFSD14CQ5VZR4 134 aa13.08□□□□□ -0.32
ERCC8-208ENST00000497892 BLOC1S2Q6QNY1 142 aa13.08□□□□□ -0.32
ERCC8-208ENST00000497892 CTCFLQ8NI51 663 aaPredicted RBP13.08□□□□□ -0.32
ERCC8-208ENST00000497892 NUP133Q8WUM0 1156 aa13.08□□□□□ -0.32
ERCC8-208ENST00000497892 MTMR8Q96EF0 704 aa13.08□□□□□ -0.32
ERCC8-208ENST00000497892 DDX11Q96FC9 970 aa13.08□□□□□ -0.32
ERCC8-208ENST00000497892 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.08□□□□□ -0.32
ERCC8-208ENST00000497892 HMX1Q9NP08 348 aaPredicted RBP13.08□□□□□ -0.32
ERCC8-208ENST00000497892 SLC12A7Q9Y666 1083 aa13.08□□□□□ -0.32
ERCC8-208ENST00000497892 MCM3APO60318 1980 aa13.07□□□□□ -0.32
ERCC8-208ENST00000497892 BAZ2BQ9UIF8 2168 aaKnown RBP13.07□□□□□ -0.32
ERCC8-208ENST00000497892 NFIBO00712 420 aa13.07□□□□□ -0.32
ERCC8-208ENST00000497892 EIF5BO60841 1220 aaKnown RBP13.07□□□□□ -0.32
ERCC8-208ENST00000497892 CPA1P15085 419 aa13.07□□□□□ -0.32
ERCC8-208ENST00000497892 RPS6KB1P23443 525 aa13.07□□□□□ -0.32
ERCC8-208ENST00000497892 PSMA5P28066 241 aa13.07□□□□□ -0.32
ERCC8-208ENST00000497892 KIF5BP33176 963 aa13.07□□□□□ -0.32
ERCC8-208ENST00000497892 GJA8P48165 433 aa13.07□□□□□ -0.32
ERCC8-208ENST00000497892 APOA5Q6Q788 366 aa13.07□□□□□ -0.32
ERCC8-208ENST00000497892 MSL3Q8N5Y2 521 aaKnown RBP13.07□□□□□ -0.32
ERCC8-208ENST00000497892 FAM133AQ8N9E0 248 aa13.07□□□□□ -0.32
ERCC8-208ENST00000497892 ZNF454Q8N9F8 522 aa13.07□□□□□ -0.32
ERCC8-208ENST00000497892 CLEC4DQ8WXI8 215 aa13.07□□□□□ -0.32
ERCC8-208ENST00000497892 SHISA4Q96DD7 197 aa13.07□□□□□ -0.32
ERCC8-208ENST00000497892 FGD4Q96M96 766 aa13.07□□□□□ -0.32
ERCC8-208ENST00000497892 KCNK17Q96T54 332 aa13.07□□□□□ -0.32
ERCC8-208ENST00000497892 RIOX1Q9H6W3 641 aa13.07□□□□□ -0.32
ERCC8-208ENST00000497892 ZBTB5O15062 677 aa13.06□□□□□ -0.32
ERCC8-208ENST00000497892 HRO43593 1189 aa13.06□□□□□ -0.32
ERCC8-208ENST00000497892 CYTH3O43739 400 aa13.06□□□□□ -0.32
ERCC8-208ENST00000497892 CYBAP13498 195 aa13.06□□□□□ -0.32
ERCC8-208ENST00000497892 RXRAP19793 462 aa13.06□□□□□ -0.32
ERCC8-208ENST00000497892 CASTP20810 708 aaKnown RBP13.06□□□□□ -0.32
ERCC8-208ENST00000497892 CCND3P30281 292 aaPredicted RBP13.06□□□□□ -0.32
ERCC8-208ENST00000497892 USH1GQ495M9 461 aa13.06□□□□□ -0.32
ERCC8-208ENST00000497892 MICU3Q86XE3 530 aa13.06□□□□□ -0.32
ERCC8-208ENST00000497892 FBXL16Q8N461 479 aa13.06□□□□□ -0.32
ERCC8-208ENST00000497892 U2AF1L4Q8WU68 220 aaKnown RBP13.06□□□□□ -0.32
ERCC8-208ENST00000497892 DEFB118Q96PH6 123 aa13.06□□□□□ -0.32
ERCC8-208ENST00000497892 TINF2Q9BSI4 451 aa13.06□□□□□ -0.32
ERCC8-208ENST00000497892 SPZ1Q9BXG8 430 aa13.06□□□□□ -0.32
ERCC8-208ENST00000497892 TM6SF1Q9BZW5 370 aa13.06□□□□□ -0.32
ERCC8-208ENST00000497892 VAT1LQ9HCJ6 419 aa13.06□□□□□ -0.32
ERCC8-208ENST00000497892 CYP39A1Q9NYL5 469 aa13.06□□□□□ -0.32
ERCC8-208ENST00000497892 BRPF3Q9ULD4 1205 aa13.06□□□□□ -0.32
ERCC8-208ENST00000497892 ABCB11O95342 1321 aa13.06□□□□□ -0.32
ERCC8-208ENST00000497892 SYNGAP1Q96PV0 1343 aa13.06□□□□□ -0.32
ERCC8-208ENST00000497892 MKI67P46013 3256 aaKnown RBP13.06□□□□□ -0.32
ERCC8-208ENST00000497892 PPP1R11O60927 126 aaPredicted RBP13.05□□□□□ -0.32
ERCC8-208ENST00000497892 SGPL1O95470 568 aa13.05□□□□□ -0.32
ERCC8-208ENST00000497892 EN2P19622 333 aaPredicted RBP13.05□□□□□ -0.32
ERCC8-208ENST00000497892 SMARCA1P28370 1054 aa13.05□□□□□ -0.32
ERCC8-208ENST00000497892 RCAN1P53805 252 aa13.05□□□□□ -0.32
ERCC8-208ENST00000497892 MAMDC4Q6UXC1 1216 aa13.05□□□□□ -0.32
ERCC8-208ENST00000497892 NSMFQ6X4W1 530 aa13.05□□□□□ -0.32
ERCC8-208ENST00000497892 FBXO11Q86XK2 927 aa13.05□□□□□ -0.32
ERCC8-208ENST00000497892 TRPV1Q8NER1 839 aa13.05□□□□□ -0.32
ERCC8-208ENST00000497892 LZTS2Q9BRK4 669 aa13.05□□□□□ -0.32
ERCC8-208ENST00000497892 AMNQ9BXJ7 453 aa13.05□□□□□ -0.32
ERCC8-208ENST00000497892 AGXT2Q9BYV1 514 aa13.05□□□□□ -0.32
ERCC8-208ENST00000497892 MAF1Q9H063 256 aa13.05□□□□□ -0.32
ERCC8-208ENST00000497892 NRBP1Q9UHY1 535 aa13.05□□□□□ -0.32
ERCC8-208ENST00000497892 ASTN1O14525 1302 aa13.05□□□□□ -0.32
ERCC8-208ENST00000497892 NID2Q14112 1375 aa13.05□□□□□ -0.32
ERCC8-208ENST00000497892 KLF18A0A0U1RQI7 1052 aa13.04□□□□□ -0.32
ERCC8-208ENST00000497892 ZBTB43O43298 467 aa13.04□□□□□ -0.32
ERCC8-208ENST00000497892 PLEKHA8P1O95397 391 aa13.04□□□□□ -0.32
ERCC8-208ENST00000497892 CAPN2P17655 700 aa13.04□□□□□ -0.32
ERCC8-208ENST00000497892 GNAQP50148 359 aa13.04□□□□□ -0.32
ERCC8-208ENST00000497892 FOSBP53539 338 aa13.04□□□□□ -0.32
ERCC8-208ENST00000497892 ANAPC15P60006 121 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms