RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 SEZ6LQ9BYH1 1024 aa13.41□□□□□ -0.26
LRTM1-202ENST00000493075 AP5M1Q9H0R1 490 aa13.41□□□□□ -0.26
LRTM1-202ENST00000493075 CPVLQ9H3G5 476 aa13.41□□□□□ -0.26
LRTM1-202ENST00000493075 JMJD4Q9H9V9 463 aa13.41□□□□□ -0.26
LRTM1-202ENST00000493075 PRDM5Q9NQX1 630 aaPredicted RBP13.41□□□□□ -0.26
LRTM1-202ENST00000493075 PDGFCQ9NRA1 345 aa13.41□□□□□ -0.26
LRTM1-202ENST00000493075 FRMPD3Q5JV73 1810 aa13.41□□□□□ -0.26
LRTM1-202ENST00000493075 ABCB11O95342 1321 aa13.41□□□□□ -0.26
LRTM1-202ENST00000493075 MROH7Q68CQ1 1323 aa13.41□□□□□ -0.26
LRTM1-202ENST00000493075 A0A0U1RQG5 324 aaPredicted RBP13.4□□□□□ -0.26
LRTM1-202ENST00000493075 ERICH2A1L162 156 aa13.4□□□□□ -0.26
LRTM1-202ENST00000493075 PALM3A6NDB9 673 aaPredicted RBP13.4□□□□□ -0.26
LRTM1-202ENST00000493075 ARVCFO00192 962 aa13.4□□□□□ -0.26
LRTM1-202ENST00000493075 DYNC1LI2O43237 492 aaPredicted RBP13.4□□□□□ -0.26
LRTM1-202ENST00000493075 IRX5P78411 483 aaPredicted RBP13.4□□□□□ -0.26
LRTM1-202ENST00000493075 FAAP100Q0VG06 881 aa13.4□□□□□ -0.26
LRTM1-202ENST00000493075 DUSP28Q4G0W2 176 aa13.4□□□□□ -0.26
LRTM1-202ENST00000493075 SLC30A10Q6XR72 485 aa13.4□□□□□ -0.26
LRTM1-202ENST00000493075 EEPD1Q7L9B9 569 aa13.4□□□□□ -0.26
LRTM1-202ENST00000493075 SH3RF1Q7Z6J0 888 aa13.4□□□□□ -0.26
LRTM1-202ENST00000493075 RALYLQ86SE5 291 aaKnown RBP13.4□□□□□ -0.26
LRTM1-202ENST00000493075 TLK2Q86UE8 772 aa13.4□□□□□ -0.26
LRTM1-202ENST00000493075 MCF2L2Q86YR7 1114 aa13.4□□□□□ -0.26
LRTM1-202ENST00000493075 BADQ92934 168 aa13.4□□□□□ -0.26
LRTM1-202ENST00000493075 MTA3Q9BTC8 594 aa13.4□□□□□ -0.26
LRTM1-202ENST00000493075 MRPL11Q9Y3B7 192 aaKnown RBP13.4□□□□□ -0.26
LRTM1-202ENST00000493075 TRIOBPQ9H2D6 2365 aa13.4□□□□□ -0.27
LRTM1-202ENST00000493075 KLRF2D3W0D1 207 aa13.39□□□□□ -0.27
LRTM1-202ENST00000493075 IFIT3O14879 490 aaKnown RBP13.39□□□□□ -0.27
LRTM1-202ENST00000493075 PQBP1O60828 265 aaKnown RBP13.39□□□□□ -0.27
LRTM1-202ENST00000493075 PDE4DQ08499 809 aa13.39□□□□□ -0.27
LRTM1-202ENST00000493075 TRAF1Q13077 416 aa13.39□□□□□ -0.27
LRTM1-202ENST00000493075 SART3Q15020 963 aaKnown RBP13.39□□□□□ -0.27
LRTM1-202ENST00000493075 FSCN1Q16658 493 aaKnown RBP13.39□□□□□ -0.27
LRTM1-202ENST00000493075 QRICH1Q2TAL8 776 aa13.39□□□□□ -0.27
LRTM1-202ENST00000493075 USH1GQ495M9 461 aa13.39□□□□□ -0.27
LRTM1-202ENST00000493075 FBXO11Q86XK2 927 aa13.39□□□□□ -0.27
LRTM1-202ENST00000493075 FBXO16Q8IX29 292 aaPredicted RBP13.39□□□□□ -0.27
LRTM1-202ENST00000493075 STAG2Q8N3U4 1231 aa13.39□□□□□ -0.27
LRTM1-202ENST00000493075 SLC43A3Q8NBI5 491 aa13.39□□□□□ -0.27
LRTM1-202ENST00000493075 VTI1AQ96AJ9 217 aa13.39□□□□□ -0.27
LRTM1-202ENST00000493075 MTMR8Q96EF0 704 aa13.39□□□□□ -0.27
LRTM1-202ENST00000493075 LRCH3Q96II8 777 aa13.39□□□□□ -0.27
LRTM1-202ENST00000493075 WDR11Q9BZH6 1224 aa13.39□□□□□ -0.27
LRTM1-202ENST00000493075 VAT1LQ9HCJ6 419 aa13.39□□□□□ -0.27
LRTM1-202ENST00000493075 TMEM39AQ9NV64 488 aa13.39□□□□□ -0.27
LRTM1-202ENST00000493075 MAP3K20Q9NYL2 800 aaKnown RBP13.39□□□□□ -0.27
LRTM1-202ENST00000493075 MAD2L2Q9UI95 211 aa13.39□□□□□ -0.27
LRTM1-202ENST00000493075 RBM8AQ9Y5S9 174 aaKnown RBP13.39□□□□□ -0.27
LRTM1-202ENST00000493075 DDX49Q9Y6V7 483 aaKnown RBP13.39□□□□□ -0.27
LRTM1-202ENST00000493075 PLXNA1Q9UIW2 1896 aa13.39□□□□□ -0.27
LRTM1-202ENST00000493075 NKRFO15226 690 aaKnown RBP eCLIP13.39□□□□□ -0.27
LRTM1-202ENST00000493075 DHX16O60231 1041 aaKnown RBP13.39□□□□□ -0.27
LRTM1-202ENST00000493075 RAG1P15918 1043 aa13.39□□□□□ -0.27
LRTM1-202ENST00000493075 BEX3Q00994 111 aa13.39□□□□□ -0.27
LRTM1-202ENST00000493075 BMP2KLQ5H9B9 411 aa13.39□□□□□ -0.27
LRTM1-202ENST00000493075 SAMD3Q8N6K7 520 aa13.39□□□□□ -0.27
LRTM1-202ENST00000493075 SYTL5Q8TDW5 730 aaPredicted RBP13.39□□□□□ -0.27
LRTM1-202ENST00000493075 IGDCC4Q8TDY8 1250 aa13.39□□□□□ -0.27
LRTM1-202ENST00000493075 IWS1Q96ST2 819 aa13.39□□□□□ -0.27
LRTM1-202ENST00000493075 AMNQ9BXJ7 453 aa13.39□□□□□ -0.27
LRTM1-202ENST00000493075 RIOX1Q9H6W3 641 aa13.39□□□□□ -0.27
LRTM1-202ENST00000493075 SMCHD1A6NHR9 2005 aa13.38□□□□□ -0.27
LRTM1-202ENST00000493075 ZBTB5O15062 677 aa13.38□□□□□ -0.27
LRTM1-202ENST00000493075 ITGB8P26012 769 aa13.38□□□□□ -0.27
LRTM1-202ENST00000493075 GHRHRQ02643 423 aa13.38□□□□□ -0.27
LRTM1-202ENST00000493075 TROAPQ12815 778 aa13.38□□□□□ -0.27
LRTM1-202ENST00000493075 GRM4Q14833 912 aa13.38□□□□□ -0.27
LRTM1-202ENST00000493075 WTAPQ15007 396 aa13.38□□□□□ -0.27
LRTM1-202ENST00000493075 TMEM63BQ5T3F8 832 aa13.38□□□□□ -0.27
LRTM1-202ENST00000493075 STOX1Q6ZVD7 989 aa13.38□□□□□ -0.27
LRTM1-202ENST00000493075 MB21D2Q8IYB1 491 aaPredicted RBP13.38□□□□□ -0.27
LRTM1-202ENST00000493075 TMTC2Q8N394 836 aa13.38□□□□□ -0.27
LRTM1-202ENST00000493075 NSUN6Q8TEA1 469 aaKnown RBP13.38□□□□□ -0.27
LRTM1-202ENST00000493075 SCFD2Q8WU76 684 aa13.38□□□□□ -0.27
LRTM1-202ENST00000493075 TBC1D5Q92609 795 aa13.38□□□□□ -0.27
LRTM1-202ENST00000493075 MAP3K14Q99558 947 aa13.38□□□□□ -0.27
LRTM1-202ENST00000493075 ESYT1Q9BSJ8 1104 aa13.38□□□□□ -0.27
LRTM1-202ENST00000493075 LSG1Q9H089 658 aaKnown RBP13.38□□□□□ -0.27
LRTM1-202ENST00000493075 TBX21Q9UL17 535 aa13.38□□□□□ -0.27
LRTM1-202ENST00000493075 TAF6LQ9Y6J9 622 aa13.38□□□□□ -0.27
LRTM1-202ENST00000493075 DNAH12Q6ZR08 3092 aa13.37□□□□□ -0.27
LRTM1-202ENST00000493075 TLR3O15455 904 aaKnown RBP13.37□□□□□ -0.27
LRTM1-202ENST00000493075 TIMP1P01033 207 aa13.37□□□□□ -0.27
LRTM1-202ENST00000493075 CPT1AP50416 773 aa13.37□□□□□ -0.27
LRTM1-202ENST00000493075 NECTIN1Q15223 517 aa13.37□□□□□ -0.27
LRTM1-202ENST00000493075 SHHQ15465 462 aa13.37□□□□□ -0.27
LRTM1-202ENST00000493075 TMEM67Q5HYA8 995 aa13.37□□□□□ -0.27
LRTM1-202ENST00000493075 FAM109BQ6ICB4 259 aaPredicted RBP13.37□□□□□ -0.27
LRTM1-202ENST00000493075 CXCL17Q6UXB2 119 aa13.37□□□□□ -0.27
LRTM1-202ENST00000493075 CATIPQ7Z7H3 387 aa13.37□□□□□ -0.27
LRTM1-202ENST00000493075 FAM126BQ8IXS8 530 aa13.37□□□□□ -0.27
LRTM1-202ENST00000493075 TAAR1Q96RJ0 339 aa13.37□□□□□ -0.27
LRTM1-202ENST00000493075 POLR3EQ9NVU0 708 aa13.37□□□□□ -0.27
LRTM1-202ENST00000493075 LAMA4Q16363 1823 aa13.36□□□□□ -0.27
LRTM1-202ENST00000493075 KPNA6O60684 536 aa13.36□□□□□ -0.27
LRTM1-202ENST00000493075 CD4P01730 458 aa13.36□□□□□ -0.27
LRTM1-202ENST00000493075 SMARCA1P28370 1054 aa13.36□□□□□ -0.27
LRTM1-202ENST00000493075 HSD17B4P51659 736 aa13.36□□□□□ -0.27
LRTM1-202ENST00000493075 ANTXR2P58335 489 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms