RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 RIC8AQ9NPQ8 531 aa23.17■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 FAM114A2Q9NRY5 505 aa23.17■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 HMGB1P1B2RPK0 211 aaPredicted RBP23.17■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 BCRP11274 1271 aa23.17■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 SGMS1Q86VZ5 419 aa23.17■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 OXER1Q8TDS5 423 aa23.17■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 STMN2Q93045 179 aa23.17■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 FMR1Q06787 632 aaKnown RBP eCLIP23.17■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 PDCLQ13371 301 aa23.17■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 TSNAXIP1Q2TAA8 658 aa23.17■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 REXO1L1PQ8IX06 675 aa23.17■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 ATP8A2Q9NTI2 1148 aa23.17■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 EYA3Q99504 573 aa23.16■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 JPH2Q9BR39 696 aaPredicted RBP23.16■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 MYOM1P52179 1685 aa23.16■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 TARSL2A2RTX5 802 aaKnown RBP23.16■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 CHGBP05060 677 aa23.16■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 ABCB4P21439 1286 aa23.16■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 MGARPQ8TDB4 240 aa23.16■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 NDST4Q9H3R1 872 aa23.16■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 VIPAS39Q9H9C1 493 aa23.16■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 FTCDO95954 541 aa23.16■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 RCAN1P53805 252 aa23.16■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 RASGRP2Q7LDG7 609 aa23.16■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.16■■□□□ 1.32e-6■■■□□ 16
CHKB-CPT1B-203ENST00000492556 FBXO2Q9UK22 296 aaPredicted RBP23.16■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 CLTAP09496 248 aa23.16■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 NEDD9Q14511 834 aa23.16■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 HDAC6Q9UBN7 1215 aa23.16■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 PCDHB13Q9Y5F0 798 aa23.16■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 ABCA9Q8IUA7 1624 aa23.16■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 NEBLO76041 1014 aa23.15■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 NR1I3Q14994 352 aa23.15■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 DDX17Q92841 729 aaKnown RBP23.15■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 PCDHA12Q9UN75 941 aa23.15■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 GOLGA8HP0CJ92 632 aa23.15■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 ATP2A2P16615 1042 aaKnown RBP23.15■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 GSPT2Q8IYD1 628 aaKnown RBP23.15■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 NFU1Q9UMS0 254 aa23.15■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 PGRMC1O00264 195 aaKnown RBP23.15■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 CCDC63Q8NA47 563 aa23.15■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 STX2P32856 288 aa23.15■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 ANKRD42Q8N9B4 389 aa23.15■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 MTA3Q9BTC8 594 aa23.15■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 STK38LQ9Y2H1 464 aa23.15■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 TTC26A0AVF1 554 aa23.14■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 FKBP3Q00688 224 aaKnown RBP23.14■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 MYCT1Q8N699 235 aa23.14■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 TRIM66O15016 1216 aa23.14■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 TBC1D8O95759 1140 aa23.14■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 UIMC1Q96RL1 719 aa23.14■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 CPSF2Q9P2I0 782 aaKnown RBP23.14■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 FEZ2Q9UHY8 353 aaPredicted RBP23.14■■□□□ 1.3
CHKB-CPT1B-203ENST00000492556 PLEKHA8P1O95397 391 aa23.14■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 PRCPP42785 496 aa23.14■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 METTL14Q9HCE5 456 aaKnown RBP23.14■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 MROH7-TTC4A0A0A0MT08 1334 aa23.14■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 CPDO75976 1380 aa23.14■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 RASGRF1Q13972 1273 aa23.14■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 ALX1Q15699 326 aa23.14■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 PBKQ96KB5 322 aa23.14■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 KLHL14Q9P2G3 628 aa23.14■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 ODF2LQ9ULJ1 636 aa23.14■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 TRIM49BA6NDI0 452 aa23.13■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 EXOC3O60645 756 aa23.13■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 PLCG1P19174 1290 aa23.13■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 NLRP10Q86W26 655 aa23.13■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 MICAL1Q8TDZ2 1067 aa23.13■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 BTG4Q9NY30 223 aa23.13■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 STK17AQ9UEE5 414 aa23.13■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 SF3B2Q13435 895 aaKnown RBP23.13■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 ARHGAP44Q17R89 818 aa23.13■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 SERPING1P05155 500 aa23.13■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 SARNPP82979 210 aaKnown RBP23.13■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 ATG9AQ7Z3C6 839 aa23.13■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 HNRNPLLQ8WVV9 542 aaKnown RBP23.13■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 STAMBPO95630 424 aa23.13■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 FOXO4P98177 505 aa23.13■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 TTLL11Q8NHH1 800 aa23.13■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 DYNLL1P63167 89 aaKnown RBP23.12■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 MRPS25P82663 173 aaKnown RBP23.12■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 EXOC3L4Q17RC7 722 aa23.12■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 INTS9Q9NV88 658 aaKnown RBP23.12■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 ATP1A1P05023 1023 aaKnown RBP23.12■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 KRT5P13647 590 aa23.12■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 RAD9BQ6WBX8 426 aa23.12■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 TACO1Q9BSH4 297 aaKnown RBP23.12■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 COL4A3BPQ9Y5P4 624 aa23.12■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 CHMP2AO43633 222 aa23.12■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 CNOT10Q9H9A5 744 aaKnown RBP23.12■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 GAS8O95995 478 aa23.12■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 SMCR8Q8TEV9 937 aaPredicted RBP23.12■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 MAIP1Q8WWC4 291 aa23.12■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 IMPG2Q9BZV3 1241 aa23.12■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 TMTC3Q6ZXV5 915 aa23.11■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 SYNCQ9H7C4 482 aa23.11■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 LIMA1Q9UHB6 759 aaKnown RBP23.11■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 A0A1W2PQC6 194 aa23.11■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 TBC1D31Q96DN5 1066 aa23.11■■□□□ 1.29
CHKB-CPT1B-203ENST00000492556 RAB3IPQ96QF0 476 aaPredicted RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms