RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 LRRCC1Q9C099 1032 aa20.63■□□□□ 0.89
RXRB-203ENST00000481441 TET1Q8NFU7 2136 aa20.62■□□□□ 0.89
RXRB-203ENST00000481441 BRWD1Q9NSI6 2320 aa20.62■□□□□ 0.89
RXRB-203ENST00000481441 RNF113AO15541 343 aaKnown RBP20.62■□□□□ 0.89
RXRB-203ENST00000481441 MS4A1P11836 297 aa20.62■□□□□ 0.89
RXRB-203ENST00000481441 MCCP23508 829 aa20.62■□□□□ 0.89
RXRB-203ENST00000481441 PURAQ00577 322 aaKnown RBP20.62■□□□□ 0.89
RXRB-203ENST00000481441 TAP1Q03518 808 aa20.62■□□□□ 0.89
RXRB-203ENST00000481441 IKQ13123 557 aaPredicted RBP20.62■□□□□ 0.89
RXRB-203ENST00000481441 PHOSPHO2Q8TCD6 241 aa20.62■□□□□ 0.89
RXRB-203ENST00000481441 PURBQ96QR8 312 aaKnown RBP20.62■□□□□ 0.89
RXRB-203ENST00000481441 ECHDC1Q9NTX5 307 aa20.62■□□□□ 0.89
RXRB-203ENST00000481441 POLR3EQ9NVU0 708 aa20.62■□□□□ 0.89
RXRB-203ENST00000481441 HCN4Q9Y3Q4 1203 aa20.62■□□□□ 0.89
RXRB-203ENST00000481441 M0R2C6 588 aa20.61■□□□□ 0.89
RXRB-203ENST00000481441 SMARCA5O60264 1052 aaPredicted RBP20.61■□□□□ 0.89
RXRB-203ENST00000481441 APPP05067 770 aa20.61■□□□□ 0.89
RXRB-203ENST00000481441 ACTN1P12814 892 aa20.61■□□□□ 0.89
RXRB-203ENST00000481441 RFC2P35250 354 aa20.61■□□□□ 0.89
RXRB-203ENST00000481441 SNAP25P60880 206 aa20.61■□□□□ 0.89
RXRB-203ENST00000481441 HNRNPUQ00839 825 aaKnown RBP eCLIP20.61■□□□□ 0.89
RXRB-203ENST00000481441 TFAP4Q01664 338 aa20.61■□□□□ 0.89
RXRB-203ENST00000481441 PTPRSQ13332 1948 aa20.61■□□□□ 0.89
RXRB-203ENST00000481441 IFNL3Q8IZI9 196 aa20.61■□□□□ 0.89
RXRB-203ENST00000481441 CHMP4CQ96CF2 233 aa20.61■□□□□ 0.89
RXRB-203ENST00000481441 PRR12Q9ULL5 1215 aa20.61■□□□□ 0.89
RXRB-203ENST00000481441 COL4A4P53420 1690 aaPredicted RBP20.6■□□□□ 0.89
RXRB-203ENST00000481441 PATL2C9JE40 543 aaKnown RBP20.6■□□□□ 0.89
RXRB-203ENST00000481441 TMEM31Q5JXX7 168 aa20.6■□□□□ 0.89
RXRB-203ENST00000481441 RCSD1Q6JBY9 416 aa20.6■□□□□ 0.89
RXRB-203ENST00000481441 NSMFQ6X4W1 530 aa20.6■□□□□ 0.89
RXRB-203ENST00000481441 KCTD1Q719H9 257 aa20.6■□□□□ 0.89
RXRB-203ENST00000481441 HERC6Q8IVU3 1022 aa20.6■□□□□ 0.89
RXRB-203ENST00000481441 ARNTL2Q8WYA1 636 aa20.6■□□□□ 0.89
RXRB-203ENST00000481441 HLA-CQ95604 372 aa20.6■□□□□ 0.89
RXRB-203ENST00000481441 MYL3P08590 195 aa20.59■□□□□ 0.89
RXRB-203ENST00000481441 PDE4BQ07343 736 aa20.59■□□□□ 0.89
RXRB-203ENST00000481441 KHSRPQ92945 711 aaKnown RBP eCLIP20.59■□□□□ 0.89
RXRB-203ENST00000481441 MTG1Q9BT17 334 aaPredicted RBP20.59■□□□□ 0.89
RXRB-203ENST00000481441 WDR11Q9BZH6 1224 aa20.59■□□□□ 0.89
RXRB-203ENST00000481441 C11orf16Q9NQ32 467 aa20.59■□□□□ 0.89
RXRB-203ENST00000481441 RBM47A0AV96 593 aaKnown RBP20.58■□□□□ 0.89
RXRB-203ENST00000481441 PITPNM1O00562 1244 aa20.58■□□□□ 0.89
RXRB-203ENST00000481441 LPXNO60711 386 aa20.58■□□□□ 0.89
RXRB-203ENST00000481441 ZFYP08048 801 aaPredicted RBP20.58■□□□□ 0.89
RXRB-203ENST00000481441 IQCF3P0C7M6 154 aa20.58■□□□□ 0.89
RXRB-203ENST00000481441 CPT1AP50416 773 aa20.58■□□□□ 0.89
RXRB-203ENST00000481441 GRB10Q13322 594 aa20.58■□□□□ 0.89
RXRB-203ENST00000481441 NBPF20Q3BBV1 942 aa20.58■□□□□ 0.89
RXRB-203ENST00000481441 RASGRP2Q7LDG7 609 aa20.58■□□□□ 0.89
RXRB-203ENST00000481441 CCPG1Q9ULG6 757 aa20.58■□□□□ 0.89
RXRB-203ENST00000481441 TRIP12Q14669 1992 aaPredicted RBP20.58■□□□□ 0.89
RXRB-203ENST00000481441 GPR37L1O60883 481 aa20.57■□□□□ 0.88
RXRB-203ENST00000481441 ICAM1P05362 532 aa20.57■□□□□ 0.88
RXRB-203ENST00000481441 ALDH5A1P51649 535 aaPredicted RBP20.57■□□□□ 0.88
RXRB-203ENST00000481441 SPRED2Q7Z698 418 aa20.57■□□□□ 0.88
RXRB-203ENST00000481441 ADD3Q9UEY8 706 aaKnown RBP20.57■□□□□ 0.88
RXRB-203ENST00000481441 LOC102724159A0A0B4J2E5 919 aa20.56■□□□□ 0.88
RXRB-203ENST00000481441 KIF28PB7ZC32 967 aa20.56■□□□□ 0.88
RXRB-203ENST00000481441 PPARAQ07869 468 aa20.56■□□□□ 0.88
RXRB-203ENST00000481441 BAATQ14032 418 aaPredicted RBP20.56■□□□□ 0.88
RXRB-203ENST00000481441 PWP2Q15269 919 aaKnown RBP20.56■□□□□ 0.88
RXRB-203ENST00000481441 FAM47CQ5HY64 1035 aa20.56■□□□□ 0.88
RXRB-203ENST00000481441 PPP4R3BQ5MIZ7 849 aa20.56■□□□□ 0.88
RXRB-203ENST00000481441 NFRKBQ6P4R8 1299 aa20.56■□□□□ 0.88
RXRB-203ENST00000481441 RETREG2Q8NC44 543 aa20.56■□□□□ 0.88
RXRB-203ENST00000481441 PPP1R13LQ8WUF5 828 aa20.56■□□□□ 0.88
RXRB-203ENST00000481441 NACAP1Q9BZK3 213 aa20.56■□□□□ 0.88
RXRB-203ENST00000481441 GPHNQ9NQX3 736 aaPredicted RBP20.56■□□□□ 0.88
RXRB-203ENST00000481441 IL17RBQ9NRM6 502 aa20.56■□□□□ 0.88
RXRB-203ENST00000481441 STX8Q9UNK0 236 aa20.56■□□□□ 0.88
RXRB-203ENST00000481441 PIEZO1Q92508 2521 aa20.56■□□□□ 0.88
RXRB-203ENST00000481441 MUC6Q6W4X9 2439 aa20.56■□□□□ 0.88
RXRB-203ENST00000481441 SLC3A2P08195 630 aaKnown RBP20.55■□□□□ 0.88
RXRB-203ENST00000481441 OR6J1Q8NGC5 347 aa20.55■□□□□ 0.88
RXRB-203ENST00000481441 FTOQ9C0B1 505 aaKnown RBP eCLIP20.55■□□□□ 0.88
RXRB-203ENST00000481441 RANBP17Q9H2T7 1088 aaKnown RBP20.55■□□□□ 0.88
RXRB-203ENST00000481441 BAIAP3O94812 1187 aa20.54■□□□□ 0.88
RXRB-203ENST00000481441 PTPN11Q06124 597 aaPredicted RBP20.54■□□□□ 0.88
RXRB-203ENST00000481441 TSHZ3Q63HK5 1081 aa20.54■□□□□ 0.88
RXRB-203ENST00000481441 SEC62Q99442 399 aaKnown RBP20.54■□□□□ 0.88
RXRB-203ENST00000481441 CHMP4BQ9H444 224 aaKnown RBP20.54■□□□□ 0.88
RXRB-203ENST00000481441 CD320Q9NPF0 282 aa20.54■□□□□ 0.88
RXRB-203ENST00000481441 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.54■□□□□ 0.88
RXRB-203ENST00000481441 A6NJR5 290 aa20.53■□□□□ 0.88
RXRB-203ENST00000481441 NFIBO00712 420 aa20.53■□□□□ 0.88
RXRB-203ENST00000481441 NMT2O60551 498 aa20.53■□□□□ 0.88
RXRB-203ENST00000481441 BFSP2Q13515 415 aa20.53■□□□□ 0.88
RXRB-203ENST00000481441 NAPBQ9H115 298 aa20.53■□□□□ 0.88
RXRB-203ENST00000481441 PI4K2BG5E9Z4 385 aa20.53■□□□□ 0.88
RXRB-203ENST00000481441 NKRFO15226 690 aaKnown RBP eCLIP20.53■□□□□ 0.88
RXRB-203ENST00000481441 KPNA6O60684 536 aa20.53■□□□□ 0.88
RXRB-203ENST00000481441 NOVP48745 357 aa20.53■□□□□ 0.88
RXRB-203ENST00000481441 BRDTQ58F21 947 aaPredicted RBP20.53■□□□□ 0.88
RXRB-203ENST00000481441 RAD50Q92878 1312 aa20.52■□□□□ 0.88
RXRB-203ENST00000481441 PTPDC1A2A3K4 754 aa20.52■□□□□ 0.87
RXRB-203ENST00000481441 LCHNA4D1U4 455 aa20.52■□□□□ 0.87
RXRB-203ENST00000481441 FAM86C2PA6NEL3 165 aa20.52■□□□□ 0.87
RXRB-203ENST00000481441 TSPY2A6NKD2 308 aa20.52■□□□□ 0.87
RXRB-203ENST00000481441 KCNJ6P48051 423 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms