RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 EXOC7Q9UPT5 735 aa15.82■□□□□ 0.12
COL20A1-206ENST00000479501 ATP6V0A2Q9Y487 856 aa15.82■□□□□ 0.12
COL20A1-206ENST00000479501 SMIM5Q71RC9 77 aa15.81■□□□□ 0.12
COL20A1-206ENST00000479501 PAF1Q8N7H5 531 aa15.81■□□□□ 0.12
COL20A1-206ENST00000479501 RDH13Q8NBN7 331 aa15.81■□□□□ 0.12
COL20A1-206ENST00000479501 COL4A3BPQ9Y5P4 624 aa15.81■□□□□ 0.12
COL20A1-206ENST00000479501 KDM6AO15550 1401 aaPredicted RBP15.81■□□□□ 0.12
COL20A1-206ENST00000479501 SHPRHQ149N8 1683 aa15.81■□□□□ 0.12
COL20A1-206ENST00000479501 GJC1P36383 396 aa15.81■□□□□ 0.12
COL20A1-206ENST00000479501 CCDC26Q8TAB7 109 aa15.81■□□□□ 0.12
COL20A1-206ENST00000479501 TMOD4Q9NZQ9 345 aa15.81■□□□□ 0.12
COL20A1-206ENST00000479501 ORC4O43929 436 aa15.81■□□□□ 0.12
COL20A1-206ENST00000479501 SLIT1O75093 1534 aa15.81■□□□□ 0.12
COL20A1-206ENST00000479501 ADRA2BP18089 450 aa15.81■□□□□ 0.12
COL20A1-206ENST00000479501 CASP1P29466 404 aa15.81■□□□□ 0.12
COL20A1-206ENST00000479501 CCDC144BQ3MJ40 725 aa15.81■□□□□ 0.12
COL20A1-206ENST00000479501 CC2D2BQ6DHV5 1058 aa15.81■□□□□ 0.12
COL20A1-206ENST00000479501 NSUN4Q96CB9 384 aaKnown RBP15.81■□□□□ 0.12
COL20A1-206ENST00000479501 IFT74Q96LB3 600 aa15.81■□□□□ 0.12
COL20A1-206ENST00000479501 STMN4Q9H169 189 aaPredicted RBP15.81■□□□□ 0.12
COL20A1-206ENST00000479501 CPVLQ9H3G5 476 aa15.81■□□□□ 0.12
COL20A1-206ENST00000479501 PI4KBQ9UBF8 816 aa15.81■□□□□ 0.12
COL20A1-206ENST00000479501 TSKSQ9UJT2 592 aa15.81■□□□□ 0.12
COL20A1-206ENST00000479501 A6NNZ2 444 aa15.8■□□□□ 0.12
COL20A1-206ENST00000479501 CCNE1P24864 410 aa15.8■□□□□ 0.12
COL20A1-206ENST00000479501 TUBB8Q3ZCM7 444 aa15.8■□□□□ 0.12
COL20A1-206ENST00000479501 CFAP221Q4G0U5 840 aa15.8■□□□□ 0.12
COL20A1-206ENST00000479501 FNBP4Q8N3X1 1017 aaPredicted RBP15.8■□□□□ 0.12
COL20A1-206ENST00000479501 CEP104O60308 925 aa15.8■□□□□ 0.12
COL20A1-206ENST00000479501 HPDP32754 393 aaPredicted RBP15.8■□□□□ 0.12
COL20A1-206ENST00000479501 ACTN2P35609 894 aa15.8■□□□□ 0.12
COL20A1-206ENST00000479501 BRD3Q15059 726 aa15.8■□□□□ 0.12
COL20A1-206ENST00000479501 CCDC77Q9BR77 488 aa15.8■□□□□ 0.12
COL20A1-206ENST00000479501 MTUS1Q9ULD2 1270 aa15.8■□□□□ 0.12
COL20A1-206ENST00000479501 ARHGAP23Q9P227 1491 aa15.8■□□□□ 0.12
COL20A1-206ENST00000479501 NPR1P16066 1061 aa15.8■□□□□ 0.12
COL20A1-206ENST00000479501 TNFAIP1Q13829 316 aa15.8■□□□□ 0.12
COL20A1-206ENST00000479501 RPS6KA1Q15418 735 aa15.8■□□□□ 0.12
COL20A1-206ENST00000479501 SAMD15Q9P1V8 674 aa15.8■□□□□ 0.12
COL20A1-206ENST00000479501 SMIM23A6NLE4 172 aa15.8■□□□□ 0.12
COL20A1-206ENST00000479501 NTSR2O95665 410 aa15.8■□□□□ 0.12
COL20A1-206ENST00000479501 ALAS1P13196 640 aa15.8■□□□□ 0.12
COL20A1-206ENST00000479501 WDR44Q5JSH3 913 aa15.8■□□□□ 0.12
COL20A1-206ENST00000479501 MIER3Q7Z3K6 550 aa15.8■□□□□ 0.12
COL20A1-206ENST00000479501 NAP1L3Q99457 506 aaPredicted RBP15.8■□□□□ 0.12
COL20A1-206ENST00000479501 CDC23Q9UJX2 597 aa15.8■□□□□ 0.12
COL20A1-206ENST00000479501 GOLGA6BA6NDN3 693 aa15.79■□□□□ 0.12
COL20A1-206ENST00000479501 DCAF8L1A6NGE4 600 aa15.79■□□□□ 0.12
COL20A1-206ENST00000479501 SPOPO43791 374 aa15.79■□□□□ 0.12
COL20A1-206ENST00000479501 GDF11O95390 407 aa15.79■□□□□ 0.12
COL20A1-206ENST00000479501 KRT5P13647 590 aa15.79■□□□□ 0.12
COL20A1-206ENST00000479501 POLR2FP61218 127 aaKnown RBP15.79■□□□□ 0.12
COL20A1-206ENST00000479501 PABPC4Q13310 644 aaKnown RBP eCLIP15.79■□□□□ 0.12
COL20A1-206ENST00000479501 ITPK1Q13572 414 aa15.79■□□□□ 0.12
COL20A1-206ENST00000479501 NFIXQ14938 502 aa15.79■□□□□ 0.12
COL20A1-206ENST00000479501 FAM178BQ8IXR5 827 aa15.79■□□□□ 0.12
COL20A1-206ENST00000479501 RETREG2Q8NC44 543 aa15.79■□□□□ 0.12
COL20A1-206ENST00000479501 KIFAP3Q92845 792 aa15.79■□□□□ 0.12
COL20A1-206ENST00000479501 EPB41L4AQ9HCS5 686 aaPredicted RBP15.79■□□□□ 0.12
COL20A1-206ENST00000479501 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.79■□□□□ 0.12
COL20A1-206ENST00000479501 PLEKHG2Q9H7P9 1386 aa15.79■□□□□ 0.12
COL20A1-206ENST00000479501 SPATA31A1Q5TZJ5 1347 aa15.79■□□□□ 0.12
COL20A1-206ENST00000479501 STAT1P42224 750 aa15.79■□□□□ 0.12
COL20A1-206ENST00000479501 FKBP3Q00688 224 aaKnown RBP15.79■□□□□ 0.12
COL20A1-206ENST00000479501 LRRC41Q15345 812 aa15.79■□□□□ 0.12
COL20A1-206ENST00000479501 KMT5BQ4FZB7 885 aa15.79■□□□□ 0.12
COL20A1-206ENST00000479501 SLC35F6Q8N357 371 aa15.79■□□□□ 0.12
COL20A1-206ENST00000479501 HOOK2Q96ED9 719 aa15.79■□□□□ 0.12
COL20A1-206ENST00000479501 CLRN2A0PK11 232 aa15.79■□□□□ 0.12
COL20A1-206ENST00000479501 MMP10P09238 476 aa15.79■□□□□ 0.12
COL20A1-206ENST00000479501 HARSP12081 509 aaKnown RBP15.79■□□□□ 0.12
COL20A1-206ENST00000479501 IFT20Q8IY31 132 aa15.79■□□□□ 0.12
COL20A1-206ENST00000479501 OSBPL5Q9H0X9 879 aaPredicted RBP15.79■□□□□ 0.12
COL20A1-206ENST00000479501 GDAQ9Y2T3 454 aa15.79■□□□□ 0.12
COL20A1-206ENST00000479501 PNMA6FA0A0J9YX94 578 aa15.78■□□□□ 0.12
COL20A1-206ENST00000479501 BCRP11274 1271 aa15.78■□□□□ 0.12
COL20A1-206ENST00000479501 CYP2J2P51589 502 aa15.78■□□□□ 0.12
COL20A1-206ENST00000479501 CCDC50Q8IVM0 306 aa15.78■□□□□ 0.12
COL20A1-206ENST00000479501 METTL14Q9HCE5 456 aaKnown RBP15.78■□□□□ 0.12
COL20A1-206ENST00000479501 RIC8AQ9NPQ8 531 aa15.78■□□□□ 0.12
COL20A1-206ENST00000479501 MYO5BQ9ULV0 1848 aa15.78■□□□□ 0.12
COL20A1-206ENST00000479501 MROH7-TTC4A0A0A0MT08 1334 aa15.78■□□□□ 0.12
COL20A1-206ENST00000479501 CUL4BQ13620 913 aa15.78■□□□□ 0.12
COL20A1-206ENST00000479501 DHX40Q8IX18 779 aaKnown RBP15.78■□□□□ 0.12
COL20A1-206ENST00000479501 LARSQ9P2J5 1176 aaKnown RBP15.78■□□□□ 0.12
COL20A1-206ENST00000479501 MTRF1LQ9UGC7 380 aaKnown RBP15.78■□□□□ 0.12
COL20A1-206ENST00000479501 PHLPP2Q6ZVD8 1323 aa15.78■□□□□ 0.12
COL20A1-206ENST00000479501 BMP3P12645 472 aa15.78■□□□□ 0.12
COL20A1-206ENST00000479501 IQCB1Q15051 598 aa15.78■□□□□ 0.12
COL20A1-206ENST00000479501 KRT31Q15323 416 aa15.78■□□□□ 0.12
COL20A1-206ENST00000479501 UBE2SQ16763 222 aa15.78■□□□□ 0.12
COL20A1-206ENST00000479501 ARHGAP44Q17R89 818 aa15.78■□□□□ 0.12
COL20A1-206ENST00000479501 SEL1L2Q5TEA6 688 aa15.78■□□□□ 0.12
COL20A1-206ENST00000479501 RIMS1Q86UR5 1692 aaKnown RBP15.78■□□□□ 0.12
COL20A1-206ENST00000479501 SOWAHDA6NJG2 315 aa15.78■□□□□ 0.12
COL20A1-206ENST00000479501 PLCB3Q01970 1234 aa15.78■□□□□ 0.12
COL20A1-206ENST00000479501 PEX26Q7Z412 305 aa15.78■□□□□ 0.12
COL20A1-206ENST00000479501 NLRX1Q86UT6 975 aa15.78■□□□□ 0.12
COL20A1-206ENST00000479501 SENP2Q9HC62 589 aa15.78■□□□□ 0.12
COL20A1-206ENST00000479501 CTTNBP2NLQ9P2B4 639 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms