RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 FTOQ9C0B1 505 aaKnown RBP eCLIP7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 TOMM22Q9NS69 142 aa7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 ZBTB40Q9NUA8 1239 aa7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 TRMT13Q9NUP7 481 aaKnown RBP7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 GNEQ9Y223 722 aaKnown RBP7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 NOD1Q9Y239 953 aa7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 PCDHA11Q9Y5I1 949 aa7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 PRRC2BQ5JSZ5 2229 aaKnown RBP7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 BDP1A6H8Y1 2624 aa7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 SIP14410 1827 aa7.92□□□□□ -1.14
RTFDC1-206ENST00000477485 NCOR1O75376 2440 aa7.91□□□□□ -1.14
RTFDC1-206ENST00000477485 CHD9Q3L8U1 2897 aa7.91□□□□□ -1.14
RTFDC1-206ENST00000477485 RANBP6O60518 1105 aaKnown RBP7.91□□□□□ -1.14
RTFDC1-206ENST00000477485 ZFYP08048 801 aaPredicted RBP7.91□□□□□ -1.14
RTFDC1-206ENST00000477485 CALML3P27482 149 aa7.91□□□□□ -1.14
RTFDC1-206ENST00000477485 PLA2G5P39877 138 aa7.91□□□□□ -1.14
RTFDC1-206ENST00000477485 CPT1AP50416 773 aa7.91□□□□□ -1.14
RTFDC1-206ENST00000477485 PPARAQ07869 468 aa7.91□□□□□ -1.14
RTFDC1-206ENST00000477485 TTLL4Q14679 1199 aa7.91□□□□□ -1.14
RTFDC1-206ENST00000477485 TKFCQ3LXA3 575 aa7.91□□□□□ -1.14
RTFDC1-206ENST00000477485 BRDTQ58F21 947 aaPredicted RBP7.91□□□□□ -1.14
RTFDC1-206ENST00000477485 KRT40Q6A162 431 aa7.91□□□□□ -1.14
RTFDC1-206ENST00000477485 IQSEC1Q6DN90 963 aa7.91□□□□□ -1.14
RTFDC1-206ENST00000477485 NEDD1Q8NHV4 660 aa7.91□□□□□ -1.14
RTFDC1-206ENST00000477485 MKL1Q969V6 931 aa7.91□□□□□ -1.14
RTFDC1-206ENST00000477485 SEC62Q99442 399 aaKnown RBP7.91□□□□□ -1.14
RTFDC1-206ENST00000477485 WDR11Q9BZH6 1224 aa7.91□□□□□ -1.14
RTFDC1-206ENST00000477485 ALDH8A1Q9H2A2 487 aaPredicted RBP7.91□□□□□ -1.14
RTFDC1-206ENST00000477485 VTA1Q9NP79 307 aa7.91□□□□□ -1.14
RTFDC1-206ENST00000477485 POLR3EQ9NVU0 708 aa7.91□□□□□ -1.14
RTFDC1-206ENST00000477485 CYP39A1Q9NYL5 469 aa7.91□□□□□ -1.14
RTFDC1-206ENST00000477485 ADD3Q9UEY8 706 aaKnown RBP7.91□□□□□ -1.14
RTFDC1-206ENST00000477485 PRR12Q9ULL5 1215 aa7.91□□□□□ -1.14
RTFDC1-206ENST00000477485 ZNF536O15090 1300 aa7.91□□□□□ -1.14
RTFDC1-206ENST00000477485 GRIN2DO15399 1336 aa7.91□□□□□ -1.14
RTFDC1-206ENST00000477485 TNKSO95271 1327 aa7.91□□□□□ -1.14
RTFDC1-206ENST00000477485 TET1Q8NFU7 2136 aa7.91□□□□□ -1.14
RTFDC1-206ENST00000477485 SCN10AQ9Y5Y9 1956 aa7.9□□□□□ -1.14
RTFDC1-206ENST00000477485 PLIN4Q96Q06 1357 aa7.9□□□□□ -1.14
RTFDC1-206ENST00000477485 FRMPD2Q68DX3 1309 aaPredicted RBP7.9□□□□□ -1.14
RTFDC1-206ENST00000477485 RAD50Q92878 1312 aa7.9□□□□□ -1.14
RTFDC1-206ENST00000477485 KIF28PB7ZC32 967 aa7.9□□□□□ -1.14
RTFDC1-206ENST00000477485 PATL2C9JE40 543 aaKnown RBP7.9□□□□□ -1.14
RTFDC1-206ENST00000477485 NMT2O60551 498 aa7.9□□□□□ -1.14
RTFDC1-206ENST00000477485 SUPT20HL2P0C7V6 817 aa7.9□□□□□ -1.14
RTFDC1-206ENST00000477485 SLC16A2P36021 539 aa7.9□□□□□ -1.14
RTFDC1-206ENST00000477485 KCNJ6P48051 423 aa7.9□□□□□ -1.14
RTFDC1-206ENST00000477485 CTDSPL2Q05D32 466 aa7.9□□□□□ -1.14
RTFDC1-206ENST00000477485 C1QBPQ07021 282 aaKnown RBP7.9□□□□□ -1.14
RTFDC1-206ENST00000477485 PDE4DQ08499 809 aa7.9□□□□□ -1.14
RTFDC1-206ENST00000477485 RRP12Q5JTH9 1297 aaKnown RBP7.9□□□□□ -1.14
RTFDC1-206ENST00000477485 PPP4R3BQ5MIZ7 849 aa7.9□□□□□ -1.14
RTFDC1-206ENST00000477485 RCSD1Q6JBY9 416 aa7.9□□□□□ -1.14
RTFDC1-206ENST00000477485 TAPT1Q6NXT6 567 aa7.9□□□□□ -1.14
RTFDC1-206ENST00000477485 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.9□□□□□ -1.14
RTFDC1-206ENST00000477485 SLC43A3Q8NBI5 491 aa7.9□□□□□ -1.14
RTFDC1-206ENST00000477485 RETREG2Q8NC44 543 aa7.9□□□□□ -1.14
RTFDC1-206ENST00000477485 GMCL1Q96IK5 515 aa7.9□□□□□ -1.14
RTFDC1-206ENST00000477485 MPHOSPH6Q99547 160 aaKnown RBP7.9□□□□□ -1.14
RTFDC1-206ENST00000477485 C1QTNF1Q9BXJ1 281 aa7.9□□□□□ -1.14
RTFDC1-206ENST00000477485 SEZ6LQ9BYH1 1024 aa7.9□□□□□ -1.14
RTFDC1-206ENST00000477485 SYNPO2Q9UMS6 1093 aa7.9□□□□□ -1.14
RTFDC1-206ENST00000477485 HCN4Q9Y3Q4 1203 aa7.9□□□□□ -1.14
RTFDC1-206ENST00000477485 REV3LO60673 3130 aa7.89□□□□□ -1.15
RTFDC1-206ENST00000477485 NLRC5Q86WI3 1866 aa7.89□□□□□ -1.15
RTFDC1-206ENST00000477485 ERC2O15083 957 aa7.89□□□□□ -1.15
RTFDC1-206ENST00000477485 ICAM1P05362 532 aa7.89□□□□□ -1.15
RTFDC1-206ENST00000477485 PFKMP08237 780 aa7.89□□□□□ -1.15
RTFDC1-206ENST00000477485 ALDH5A1P51649 535 aaPredicted RBP7.89□□□□□ -1.15
RTFDC1-206ENST00000477485 NKX3-2P78367 333 aa7.89□□□□□ -1.15
RTFDC1-206ENST00000477485 PURAQ00577 322 aaKnown RBP7.89□□□□□ -1.15
RTFDC1-206ENST00000477485 BAATQ14032 418 aaPredicted RBP7.89□□□□□ -1.15
RTFDC1-206ENST00000477485 PPP2R5BQ15173 497 aa7.89□□□□□ -1.15
RTFDC1-206ENST00000477485 DUSP28Q4G0W2 176 aa7.89□□□□□ -1.15
RTFDC1-206ENST00000477485 SLC30A10Q6XR72 485 aa7.89□□□□□ -1.15
RTFDC1-206ENST00000477485 CRBNQ96SW2 442 aa7.89□□□□□ -1.15
RTFDC1-206ENST00000477485 SLC9A7Q96T83 725 aa7.89□□□□□ -1.15
RTFDC1-206ENST00000477485 MTG1Q9BT17 334 aaPredicted RBP7.89□□□□□ -1.15
RTFDC1-206ENST00000477485 ZBED2Q9BTP6 218 aa7.89□□□□□ -1.15
RTFDC1-206ENST00000477485 GPCPD1Q9NPB8 672 aa7.89□□□□□ -1.15
RTFDC1-206ENST00000477485 INCENPQ9NQS7 918 aa7.89□□□□□ -1.15
RTFDC1-206ENST00000477485 MTUS1Q9ULD2 1270 aa7.89□□□□□ -1.15
RTFDC1-206ENST00000477485 Q9Y3F1 56 aa7.89□□□□□ -1.15
RTFDC1-206ENST00000477485 MTCH2Q9Y6C9 303 aa7.89□□□□□ -1.15
RTFDC1-206ENST00000477485 EPOPA6NHQ4 379 aa7.88□□□□□ -1.15
RTFDC1-206ENST00000477485 NFIBO00712 420 aa7.88□□□□□ -1.15
RTFDC1-206ENST00000477485 TLL1O43897 1013 aa7.88□□□□□ -1.15
RTFDC1-206ENST00000477485 BMP1P13497 986 aa7.88□□□□□ -1.15
RTFDC1-206ENST00000477485 RFC2P35250 354 aa7.88□□□□□ -1.15
RTFDC1-206ENST00000477485 NBPF20Q3BBV1 942 aa7.88□□□□□ -1.15
RTFDC1-206ENST00000477485 USH1GQ495M9 461 aa7.88□□□□□ -1.15
RTFDC1-206ENST00000477485 C20orf194Q5TEA3 1177 aa7.88□□□□□ -1.15
RTFDC1-206ENST00000477485 SYDE2Q5VT97 1194 aa7.88□□□□□ -1.15
RTFDC1-206ENST00000477485 TTBK2Q6IQ55 1244 aa7.88□□□□□ -1.15
RTFDC1-206ENST00000477485 RNF207Q6ZRF8 634 aa7.88□□□□□ -1.15
RTFDC1-206ENST00000477485 MIER1Q8N108 512 aa7.88□□□□□ -1.15
RTFDC1-206ENST00000477485 HLA-CQ95604 372 aa7.88□□□□□ -1.15
RTFDC1-206ENST00000477485 ZBTB47Q9UFB7 747 aaPredicted RBP7.88□□□□□ -1.15
RTFDC1-206ENST00000477485 RCAN3Q9UKA8 241 aa7.88□□□□□ -1.15
RTFDC1-206ENST00000477485 TRANK1O15050 2925 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms