RNA–Protein interactions for RNA: ENST00000476824.1

ITGA4-208, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,004 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-208ENST00000476824 PDLIM7Q9NR12 457 aa5.58□□□□□ -1.52
ITGA4-208ENST00000476824 PLA2G2DQ9UNK4 145 aa5.58□□□□□ -1.52
ITGA4-208ENST00000476824 CAPNS1P04632 268 aa5.57□□□□□ -1.52
ITGA4-208ENST00000476824 MPOP05164 745 aa5.57□□□□□ -1.52
ITGA4-208ENST00000476824 KCNJ6P48051 423 aa5.57□□□□□ -1.52
ITGA4-208ENST00000476824 SRSF3P84103 164 aaKnown RBP5.57□□□□□ -1.52
ITGA4-208ENST00000476824 TMEM132EQ6IEE7 984 aa5.57□□□□□ -1.52
ITGA4-208ENST00000476824 ATG14Q6ZNE5 492 aa5.57□□□□□ -1.52
ITGA4-208ENST00000476824 SPATC1Q76KD6 591 aa5.57□□□□□ -1.52
ITGA4-208ENST00000476824 TMEM145Q8NBT3 493 aa5.57□□□□□ -1.52
ITGA4-208ENST00000476824 KREMEN2Q8NCW0 462 aa5.57□□□□□ -1.52
ITGA4-208ENST00000476824 DPF3Q92784 378 aa5.57□□□□□ -1.52
ITGA4-208ENST00000476824 SLC26A8Q96RN1 970 aa5.57□□□□□ -1.52
ITGA4-208ENST00000476824 GCM1Q9NP62 436 aa5.57□□□□□ -1.52
ITGA4-208ENST00000476824 A0A1W2PQJ5 194 aa5.56□□□□□ -1.52
ITGA4-208ENST00000476824 DBHP09172 617 aa5.56□□□□□ -1.52
ITGA4-208ENST00000476824 TMEM253P0C7T8 217 aa5.56□□□□□ -1.52
ITGA4-208ENST00000476824 EPHB3P54753 998 aa5.56□□□□□ -1.52
ITGA4-208ENST00000476824 GFRA1P56159 465 aa5.56□□□□□ -1.52
ITGA4-208ENST00000476824 YBX1P67809 324 aaKnown RBP5.56□□□□□ -1.52
ITGA4-208ENST00000476824 DLG4P78352 724 aa5.56□□□□□ -1.52
ITGA4-208ENST00000476824 PKN1Q16512 942 aa5.56□□□□□ -1.52
ITGA4-208ENST00000476824 TMC6Q7Z403 805 aa5.56□□□□□ -1.52
ITGA4-208ENST00000476824 MTA3Q9BTC8 594 aa5.56□□□□□ -1.52
ITGA4-208ENST00000476824 EPN3Q9H201 632 aa5.56□□□□□ -1.52
ITGA4-208ENST00000476824 CNTD2Q9H8S5 307 aa5.56□□□□□ -1.52
ITGA4-208ENST00000476824 BTG4Q9NY30 223 aa5.56□□□□□ -1.52
ITGA4-208ENST00000476824 MBD1Q9UIS9 605 aaPredicted RBP5.56□□□□□ -1.52
ITGA4-208ENST00000476824 MSRB2Q9Y3D2 182 aa5.56□□□□□ -1.52
ITGA4-208ENST00000476824 TEX51A0A1B0GUA7 166 aa5.55□□□□□ -1.52
ITGA4-208ENST00000476824 ZC3H12DA2A288 527 aaKnown RBP5.55□□□□□ -1.52
ITGA4-208ENST00000476824 NFIBO00712 420 aa5.55□□□□□ -1.52
ITGA4-208ENST00000476824 PEX10O60683 326 aa5.55□□□□□ -1.52
ITGA4-208ENST00000476824 TSPAN15O95858 294 aa5.55□□□□□ -1.52
ITGA4-208ENST00000476824 SCG5P05408 212 aa5.55□□□□□ -1.52
ITGA4-208ENST00000476824 LCP1P13796 627 aa5.55□□□□□ -1.52
ITGA4-208ENST00000476824 HOXC12P31275 282 aa5.55□□□□□ -1.52
ITGA4-208ENST00000476824 RAP1GAPP47736 663 aa5.55□□□□□ -1.52
ITGA4-208ENST00000476824 NCKAP1LP55160 1127 aa5.55□□□□□ -1.52
ITGA4-208ENST00000476824 PLEKHN1Q494U1 663 aaPredicted RBP5.55□□□□□ -1.52
ITGA4-208ENST00000476824 YOD1Q5VVQ6 348 aaPredicted RBP5.55□□□□□ -1.52
ITGA4-208ENST00000476824 CILP2Q8IUL8 1156 aa5.55□□□□□ -1.52
ITGA4-208ENST00000476824 LZTR1Q8N653 840 aa5.55□□□□□ -1.52
ITGA4-208ENST00000476824 NLGN2Q8NFZ4 835 aa5.55□□□□□ -1.52
ITGA4-208ENST00000476824 C1orf159Q96HA4 380 aa5.55□□□□□ -1.52
ITGA4-208ENST00000476824 PPP1R16BQ96T49 567 aa5.55□□□□□ -1.52
ITGA4-208ENST00000476824 MMP19Q99542 508 aa5.55□□□□□ -1.52
ITGA4-208ENST00000476824 IER2Q9BTL4 223 aa5.55□□□□□ -1.52
ITGA4-208ENST00000476824 BCAS3Q9H6U6 928 aa5.55□□□□□ -1.52
ITGA4-208ENST00000476824 ARHGEF4Q9NR80 690 aa5.55□□□□□ -1.52
ITGA4-208ENST00000476824 PFDN2Q9UHV9 154 aa5.55□□□□□ -1.52
ITGA4-208ENST00000476824 FBXL7Q9UJT9 491 aa5.55□□□□□ -1.52
ITGA4-208ENST00000476824 FAM221BA6H8Z2 402 aa5.54□□□□□ -1.52
ITGA4-208ENST00000476824 NPIPB6E9PJ23 425 aa5.54□□□□□ -1.52
ITGA4-208ENST00000476824 AGRPO00253 132 aa5.54□□□□□ -1.52
ITGA4-208ENST00000476824 U2SURPO15042 1029 aaKnown RBP5.54□□□□□ -1.52
ITGA4-208ENST00000476824 DLX3O60479 287 aa5.54□□□□□ -1.52
ITGA4-208ENST00000476824 NPHS1O60500 1241 aa5.54□□□□□ -1.52
ITGA4-208ENST00000476824 FUCA1P04066 466 aa5.54□□□□□ -1.52
ITGA4-208ENST00000476824 MED14OSP0DP75 135 aa5.54□□□□□ -1.52
ITGA4-208ENST00000476824 GLI4P10075 376 aa5.54□□□□□ -1.52
ITGA4-208ENST00000476824 CDR1P51861 262 aa5.54□□□□□ -1.52
ITGA4-208ENST00000476824 CORO7P57737 925 aa5.54□□□□□ -1.52
ITGA4-208ENST00000476824 SERINC3Q13530 473 aa5.54□□□□□ -1.52
ITGA4-208ENST00000476824 TEX2Q8IWB9 1127 aa5.54□□□□□ -1.52
ITGA4-208ENST00000476824 PPIL6Q8IXY8 311 aa5.54□□□□□ -1.52
ITGA4-208ENST00000476824 PMFBP1Q8TBY8 1022 aa5.54□□□□□ -1.52
ITGA4-208ENST00000476824 DNAJC2Q99543 621 aaKnown RBP5.54□□□□□ -1.52
ITGA4-208ENST00000476824 SIRT5Q9NXA8 310 aa5.54□□□□□ -1.52
ITGA4-208ENST00000476824 MARCH2Q9P0N8 246 aa5.54□□□□□ -1.52
ITGA4-208ENST00000476824 SMG5Q9UPR3 1016 aaKnown RBP5.54□□□□□ -1.52
ITGA4-208ENST00000476824 SIT1Q9Y3P8 196 aa5.54□□□□□ -1.52
ITGA4-208ENST00000476824 ABCC9O60706 1549 aa5.53□□□□□ -1.52
ITGA4-208ENST00000476824 TRBV23OR9-2A0A075B6M9 112 aa5.53□□□□□ -1.52
ITGA4-208ENST00000476824 BLACEA4D250 179 aa5.53□□□□□ -1.52
ITGA4-208ENST00000476824 TCAF2A6NFQ2 919 aa5.53□□□□□ -1.52
ITGA4-208ENST00000476824 F8W031 263 aaPredicted RBP5.53□□□□□ -1.52
ITGA4-208ENST00000476824 PDPK1O15530 556 aa5.53□□□□□ -1.52
ITGA4-208ENST00000476824 MEFVO15553 781 aaPredicted RBP5.53□□□□□ -1.52
ITGA4-208ENST00000476824 PRODHO43272 600 aa5.53□□□□□ -1.52
ITGA4-208ENST00000476824 DIAPH1O60610 1272 aaKnown RBP5.53□□□□□ -1.52
ITGA4-208ENST00000476824 SEMA7AO75326 666 aa5.53□□□□□ -1.52
ITGA4-208ENST00000476824 CYBBP04839 570 aa5.53□□□□□ -1.52
ITGA4-208ENST00000476824 YBX3P16989 372 aaKnown RBP eCLIP5.53□□□□□ -1.52
ITGA4-208ENST00000476824 GLDCP23378 1020 aa5.53□□□□□ -1.52
ITGA4-208ENST00000476824 FPR2P25090 351 aa5.53□□□□□ -1.52
ITGA4-208ENST00000476824 PRR5P85299 388 aa5.53□□□□□ -1.52
ITGA4-208ENST00000476824 ZNF200P98182 395 aaPredicted RBP5.53□□□□□ -1.52
ITGA4-208ENST00000476824 RBL2Q08999 1139 aa5.53□□□□□ -1.52
ITGA4-208ENST00000476824 CBX2Q14781 532 aaPredicted RBP5.53□□□□□ -1.52
ITGA4-208ENST00000476824 SLC35F1Q5T1Q4 408 aa5.53□□□□□ -1.52
ITGA4-208ENST00000476824 LCE3BQ5TA77 95 aa5.53□□□□□ -1.52
ITGA4-208ENST00000476824 PAQR3Q6TCH7 311 aa5.53□□□□□ -1.52
ITGA4-208ENST00000476824 RCBTB1Q8NDN9 531 aa5.53□□□□□ -1.52
ITGA4-208ENST00000476824 ST13P5Q8NFI4 369 aaPredicted RBP5.53□□□□□ -1.52
ITGA4-208ENST00000476824 PLEKHO2Q8TD55 490 aa5.53□□□□□ -1.52
ITGA4-208ENST00000476824 USP33Q8TEY7 942 aa5.53□□□□□ -1.52
ITGA4-208ENST00000476824 DIO2Q92813 273 aa5.53□□□□□ -1.52
ITGA4-208ENST00000476824 HIRIP3Q9BW71 556 aaPredicted RBP5.53□□□□□ -1.52
ITGA4-208ENST00000476824 CD320Q9NPF0 282 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms