RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 PDCP20941 246 aa11.51□□□□□ -0.57
COL8A1-206ENST00000474648 NLRP5P59047 1200 aa11.51□□□□□ -0.57
COL8A1-206ENST00000474648 GHRHRQ02643 423 aa11.51□□□□□ -0.57
COL8A1-206ENST00000474648 FAM110CQ1W6H9 321 aa11.51□□□□□ -0.57
COL8A1-206ENST00000474648 DAGLBQ8NCG7 672 aa11.51□□□□□ -0.57
COL8A1-206ENST00000474648 OXER1Q8TDS5 423 aa11.51□□□□□ -0.57
COL8A1-206ENST00000474648 PORCNQ9H237 461 aa11.51□□□□□ -0.57
COL8A1-206ENST00000474648 PSTPIP2Q9H939 334 aa11.51□□□□□ -0.57
COL8A1-206ENST00000474648 RIC8AQ9NPQ8 531 aa11.51□□□□□ -0.57
COL8A1-206ENST00000474648 RNF146Q9NTX7 359 aa11.51□□□□□ -0.57
COL8A1-206ENST00000474648 PCDHA4Q9UN74 947 aa11.51□□□□□ -0.57
COL8A1-206ENST00000474648 BTBD18B2RXH4 712 aa11.5□□□□□ -0.57
COL8A1-206ENST00000474648 NFIBO00712 420 aa11.5□□□□□ -0.57
COL8A1-206ENST00000474648 TRPA1O75762 1119 aa11.5□□□□□ -0.57
COL8A1-206ENST00000474648 BRD1O95696 1058 aa11.5□□□□□ -0.57
COL8A1-206ENST00000474648 TBC1D8O95759 1140 aa11.5□□□□□ -0.57
COL8A1-206ENST00000474648 C7P10643 843 aa11.5□□□□□ -0.57
COL8A1-206ENST00000474648 XBP1P17861 261 aa11.5□□□□□ -0.57
COL8A1-206ENST00000474648 ERCC3P19447 782 aa11.5□□□□□ -0.57
COL8A1-206ENST00000474648 MRPL12P52815 198 aaKnown RBP11.5□□□□□ -0.57
COL8A1-206ENST00000474648 TRIM29Q14134 588 aa11.5□□□□□ -0.57
COL8A1-206ENST00000474648 GALNT17Q6IS24 598 aa11.5□□□□□ -0.57
COL8A1-206ENST00000474648 USP17L6PQ6QN14 398 aa11.5□□□□□ -0.57
COL8A1-206ENST00000474648 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.5□□□□□ -0.57
COL8A1-206ENST00000474648 BLIDQ8IZY5 108 aa11.5□□□□□ -0.57
COL8A1-206ENST00000474648 SHCBP1Q8NEM2 672 aa11.5□□□□□ -0.57
COL8A1-206ENST00000474648 CHST13Q8NET6 341 aa11.5□□□□□ -0.57
COL8A1-206ENST00000474648 CCDC148Q8NFR7 591 aa11.5□□□□□ -0.57
COL8A1-206ENST00000474648 CCDC12Q8WUD4 166 aaPredicted RBP11.5□□□□□ -0.57
COL8A1-206ENST00000474648 TNFRSF25Q93038 417 aa11.5□□□□□ -0.57
COL8A1-206ENST00000474648 EFCC1Q9HA90 598 aa11.5□□□□□ -0.57
COL8A1-206ENST00000474648 C6orf50Q9HD87 102 aa11.5□□□□□ -0.57
COL8A1-206ENST00000474648 HOMER2Q9NSB8 354 aa11.5□□□□□ -0.57
COL8A1-206ENST00000474648 KIF28PB7ZC32 967 aa11.49□□□□□ -0.57
COL8A1-206ENST00000474648 H3BQV1 296 aa11.49□□□□□ -0.57
COL8A1-206ENST00000474648 PIK3CDO00329 1044 aa11.49□□□□□ -0.57
COL8A1-206ENST00000474648 PDIA4P13667 645 aaKnown RBP11.49□□□□□ -0.57
COL8A1-206ENST00000474648 U2AF2P26368 475 aaKnown RBP eCLIP11.49□□□□□ -0.57
COL8A1-206ENST00000474648 CALML3P27482 149 aa11.49□□□□□ -0.57
COL8A1-206ENST00000474648 GNA11P29992 359 aa11.49□□□□□ -0.57
COL8A1-206ENST00000474648 CLK2P49760 499 aaKnown RBP11.49□□□□□ -0.57
COL8A1-206ENST00000474648 HSD17B4P51659 736 aa11.49□□□□□ -0.57
COL8A1-206ENST00000474648 ADCY7P51828 1080 aa11.49□□□□□ -0.57
COL8A1-206ENST00000474648 NR5A1Q13285 461 aa11.49□□□□□ -0.57
COL8A1-206ENST00000474648 UBE2SQ16763 222 aa11.49□□□□□ -0.57
COL8A1-206ENST00000474648 NOM1Q5C9Z4 860 aaKnown RBP11.49□□□□□ -0.57
COL8A1-206ENST00000474648 IFFO2Q5TF58 517 aa11.49□□□□□ -0.57
COL8A1-206ENST00000474648 NCAPG2Q86XI2 1143 aa11.49□□□□□ -0.57
COL8A1-206ENST00000474648 DIS3L2Q8IYB7 885 aaKnown RBP11.49□□□□□ -0.57
COL8A1-206ENST00000474648 MROH8Q9H579 483 aa11.49□□□□□ -0.57
COL8A1-206ENST00000474648 PCDHA6Q9UN73 950 aa11.49□□□□□ -0.57
COL8A1-206ENST00000474648 PCDHA8Q9Y5H6 950 aa11.49□□□□□ -0.57
COL8A1-206ENST00000474648 PARP14Q460N5 1801 aa11.49□□□□□ -0.57
COL8A1-206ENST00000474648 VPS37CA5D8V6 355 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-206ENST00000474648 GCOM1H8Y6P7 765 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-206ENST00000474648 EDIL3O43854 480 aa11.48□□□□□ -0.57
COL8A1-206ENST00000474648 CFBP00751 764 aa11.48□□□□□ -0.57
COL8A1-206ENST00000474648 POLR2MP0CAP2 368 aa11.48□□□□□ -0.57
COL8A1-206ENST00000474648 ZSCAN22P10073 491 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-206ENST00000474648 CTGFP29279 349 aa11.48□□□□□ -0.57
COL8A1-206ENST00000474648 HOXA13P31271 388 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-206ENST00000474648 COPB2P35606 906 aa11.48□□□□□ -0.57
COL8A1-206ENST00000474648 KRT2P35908 639 aa11.48□□□□□ -0.57
COL8A1-206ENST00000474648 RPS6P62753 249 aaKnown RBP11.48□□□□□ -0.57
COL8A1-206ENST00000474648 CCNA1P78396 465 aa11.48□□□□□ -0.57
COL8A1-206ENST00000474648 BAATQ14032 418 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-206ENST00000474648 EARS2Q5JPH6 523 aaKnown RBP11.48□□□□□ -0.57
COL8A1-206ENST00000474648 JAKMIP3Q5VZ66 844 aa11.48□□□□□ -0.57
COL8A1-206ENST00000474648 MCF2L2Q86YR7 1114 aa11.48□□□□□ -0.57
COL8A1-206ENST00000474648 TEX2Q8IWB9 1127 aa11.48□□□□□ -0.57
COL8A1-206ENST00000474648 SAMD3Q8N6K7 520 aa11.48□□□□□ -0.57
COL8A1-206ENST00000474648 RASGRP4Q8TDF6 673 aa11.48□□□□□ -0.57
COL8A1-206ENST00000474648 SYTL5Q8TDW5 730 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-206ENST00000474648 CUL5Q93034 780 aa11.48□□□□□ -0.57
COL8A1-206ENST00000474648 MAF1Q9H063 256 aa11.48□□□□□ -0.57
COL8A1-206ENST00000474648 GLT8D2Q9H1C3 349 aa11.48□□□□□ -0.57
COL8A1-206ENST00000474648 FOXP1Q9H334 677 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-206ENST00000474648 ACAD9Q9H845 621 aa11.48□□□□□ -0.57
COL8A1-206ENST00000474648 A1CFQ9NQ94 594 aaKnown RBP11.48□□□□□ -0.57
COL8A1-206ENST00000474648 TMEM260Q9NX78 707 aa11.48□□□□□ -0.57
COL8A1-206ENST00000474648 CYP39A1Q9NYL5 469 aa11.48□□□□□ -0.57
COL8A1-206ENST00000474648 COL20A1Q9P218 1284 aa11.48□□□□□ -0.57
COL8A1-206ENST00000474648 BIN2Q9UBW5 565 aaPredicted RBP11.48□□□□□ -0.57
COL8A1-206ENST00000474648 FBXO40Q9UH90 709 aa11.48□□□□□ -0.57
COL8A1-206ENST00000474648 A0A0G2JMZ2 1700 aa11.47□□□□□ -0.57
COL8A1-206ENST00000474648 NUCB2P80303 420 aa11.47□□□□□ -0.57
COL8A1-206ENST00000474648 CAP1Q01518 475 aa11.47□□□□□ -0.57
COL8A1-206ENST00000474648 RESTQ13127 1097 aa11.47□□□□□ -0.57
COL8A1-206ENST00000474648 SAFBQ15424 915 aaKnown RBP eCLIP11.47□□□□□ -0.57
COL8A1-206ENST00000474648 FOXD4L5Q5VV16 416 aaPredicted RBP11.47□□□□□ -0.57
COL8A1-206ENST00000474648 NSMFQ6X4W1 530 aa11.47□□□□□ -0.57
COL8A1-206ENST00000474648 RNF207Q6ZRF8 634 aa11.47□□□□□ -0.57
COL8A1-206ENST00000474648 FERMT3Q86UX7 667 aa11.47□□□□□ -0.57
COL8A1-206ENST00000474648 BICD2Q8TD16 824 aa11.47□□□□□ -0.57
COL8A1-206ENST00000474648 FOXD4L4Q8WXT5 416 aaPredicted RBP11.47□□□□□ -0.57
COL8A1-206ENST00000474648 PURBQ96QR8 312 aaKnown RBP11.47□□□□□ -0.57
COL8A1-206ENST00000474648 WBP1LQ9NX94 342 aa11.47□□□□□ -0.57
COL8A1-206ENST00000474648 SAGE1Q9NXZ1 904 aa11.47□□□□□ -0.57
COL8A1-206ENST00000474648 MAP3K20Q9NYL2 800 aaKnown RBP11.47□□□□□ -0.57
COL8A1-206ENST00000474648 CHMP5Q9NZZ3 219 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms