RNA–Protein interactions for RNA: ENST00000473909.5

NMD3-207, Transcript of NMD3 ribosome export adaptor, humanhuman

TSL 2

Gene NMD3, Length 600 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-207ENST00000473909 FMR1Q06787 632 aaKnown RBP eCLIP8.56□□□□□ -1.04
NMD3-207ENST00000473909 USP17L24Q0WX57 530 aa8.56□□□□□ -1.04
NMD3-207ENST00000473909 KARSQ15046 597 aaKnown RBP8.56□□□□□ -1.04
NMD3-207ENST00000473909 POSTNQ15063 836 aa8.56□□□□□ -1.04
NMD3-207ENST00000473909 NBPF12Q5TAG4 269 aaPredicted RBP8.56□□□□□ -1.04
NMD3-207ENST00000473909 USP17L6PQ6QN14 398 aa8.56□□□□□ -1.04
NMD3-207ENST00000473909 BTNL9Q6UXG8 535 aa8.56□□□□□ -1.04
NMD3-207ENST00000473909 ARHGAP27Q6ZUM4 889 aa8.56□□□□□ -1.04
NMD3-207ENST00000473909 PLA2G4DQ86XP0 818 aa8.56□□□□□ -1.04
NMD3-207ENST00000473909 SPC24Q8NBT2 197 aa8.56□□□□□ -1.04
NMD3-207ENST00000473909 TBC1D5Q92609 795 aa8.56□□□□□ -1.04
NMD3-207ENST00000473909 FBXO28Q9NVF7 368 aa8.56□□□□□ -1.04
NMD3-207ENST00000473909 NRBP1Q9UHY1 535 aa8.56□□□□□ -1.04
NMD3-207ENST00000473909 PRR12Q9ULL5 1215 aa8.56□□□□□ -1.04
NMD3-207ENST00000473909 TMX2Q9Y320 296 aa8.56□□□□□ -1.04
NMD3-207ENST00000473909 COBLO75128 1261 aa8.55□□□□□ -1.04
NMD3-207ENST00000473909 BMP15O95972 392 aa8.55□□□□□ -1.04
NMD3-207ENST00000473909 SLFN14P0C7P3 912 aa8.55□□□□□ -1.04
NMD3-207ENST00000473909 RPS12P25398 132 aaKnown RBP8.55□□□□□ -1.04
NMD3-207ENST00000473909 GNA11P29992 359 aa8.55□□□□□ -1.04
NMD3-207ENST00000473909 INPP5BP32019 993 aa8.55□□□□□ -1.04
NMD3-207ENST00000473909 EPS15P42566 896 aa8.55□□□□□ -1.04
NMD3-207ENST00000473909 TNNI2P48788 182 aa8.55□□□□□ -1.04
NMD3-207ENST00000473909 DPYDQ12882 1025 aa8.55□□□□□ -1.04
NMD3-207ENST00000473909 MORC3Q14149 939 aa8.55□□□□□ -1.04
NMD3-207ENST00000473909 KIF4BQ2VIQ3 1234 aa8.55□□□□□ -1.04
NMD3-207ENST00000473909 USH1GQ495M9 461 aa8.55□□□□□ -1.04
NMD3-207ENST00000473909 NAALADL2Q58DX5 795 aa8.55□□□□□ -1.04
NMD3-207ENST00000473909 NEK8Q86SG6 692 aa8.55□□□□□ -1.04
NMD3-207ENST00000473909 ELOA2Q8IYF1 753 aaPredicted RBP8.55□□□□□ -1.04
NMD3-207ENST00000473909 FAM177A1Q8N128 213 aaPredicted RBP8.55□□□□□ -1.04
NMD3-207ENST00000473909 REXO1Q8N1G1 1221 aaKnown RBP8.55□□□□□ -1.04
NMD3-207ENST00000473909 SPATA20Q8TB22 786 aa8.55□□□□□ -1.04
NMD3-207ENST00000473909 CCDC12Q8WUD4 166 aaPredicted RBP8.55□□□□□ -1.04
NMD3-207ENST00000473909 ANP32BQ92688 251 aaKnown RBP8.55□□□□□ -1.04
NMD3-207ENST00000473909 DPF2Q92785 391 aa8.55□□□□□ -1.04
NMD3-207ENST00000473909 MTMR9Q96QG7 549 aa8.55□□□□□ -1.04
NMD3-207ENST00000473909 NUDT12Q9BQG2 462 aa8.55□□□□□ -1.04
NMD3-207ENST00000473909 MMTAG2Q9BU76 263 aaKnown RBP8.55□□□□□ -1.04
NMD3-207ENST00000473909 FHDC1Q9C0D6 1143 aaPredicted RBP8.55□□□□□ -1.04
NMD3-207ENST00000473909 BLZF1Q9H2G9 400 aa8.55□□□□□ -1.04
NMD3-207ENST00000473909 PCDHA1Q9Y5I3 950 aa8.55□□□□□ -1.04
NMD3-207ENST00000473909 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.55□□□□□ -1.04
NMD3-207ENST00000473909 SBF1O95248 1867 aa8.55□□□□□ -1.04
NMD3-207ENST00000473909 ESPNB1AK53 854 aa8.54□□□□□ -1.04
NMD3-207ENST00000473909 hCG_1984214I3L0E3 225 aa8.54□□□□□ -1.04
NMD3-207ENST00000473909 MEIS2O14770 477 aa8.54□□□□□ -1.04
NMD3-207ENST00000473909 GTPBP6O43824 516 aaPredicted RBP8.54□□□□□ -1.04
NMD3-207ENST00000473909 OR52Z1P0C646 297 aa8.54□□□□□ -1.04
NMD3-207ENST00000473909 LONP1P36776 959 aaKnown RBP8.54□□□□□ -1.04
NMD3-207ENST00000473909 TECP42680 631 aa8.54□□□□□ -1.04
NMD3-207ENST00000473909 CUL4BQ13620 913 aa8.54□□□□□ -1.04
NMD3-207ENST00000473909 PTPN21Q16825 1174 aa8.54□□□□□ -1.04
NMD3-207ENST00000473909 CCDC144BQ3MJ40 725 aa8.54□□□□□ -1.04
NMD3-207ENST00000473909 PPP4R3BQ5MIZ7 849 aa8.54□□□□□ -1.04
NMD3-207ENST00000473909 LCE2DQ5TA82 110 aaPredicted RBP8.54□□□□□ -1.04
NMD3-207ENST00000473909 NT5DC1Q5TFE4 455 aa8.54□□□□□ -1.04
NMD3-207ENST00000473909 ARL6IP4Q66PJ3 421 aaKnown RBP8.54□□□□□ -1.04
NMD3-207ENST00000473909 PPP1R18Q6NYC8 613 aa8.54□□□□□ -1.04
NMD3-207ENST00000473909 CCDC174Q6PII3 467 aa8.54□□□□□ -1.04
NMD3-207ENST00000473909 TMEM92Q6UXU6 159 aa8.54□□□□□ -1.04
NMD3-207ENST00000473909 DTHD1Q6ZMT9 781 aa8.54□□□□□ -1.04
NMD3-207ENST00000473909 FBXO11Q86XK2 927 aa8.54□□□□□ -1.04
NMD3-207ENST00000473909 SMYD4Q8IYR2 804 aaPredicted RBP8.54□□□□□ -1.04
NMD3-207ENST00000473909 CEP57L1Q8IYX8 460 aa8.54□□□□□ -1.04
NMD3-207ENST00000473909 FAM43AQ8N2R8 423 aa8.54□□□□□ -1.04
NMD3-207ENST00000473909 C17orf53Q8N3J3 647 aaPredicted RBP8.54□□□□□ -1.04
NMD3-207ENST00000473909 ZNF713Q8N859 430 aaPredicted RBP8.54□□□□□ -1.04
NMD3-207ENST00000473909 HAS1Q92839 578 aa8.54□□□□□ -1.04
NMD3-207ENST00000473909 PNMA5Q96PV4 448 aa8.54□□□□□ -1.04
NMD3-207ENST00000473909 BPIFA3Q9BQP9 254 aa8.54□□□□□ -1.04
NMD3-207ENST00000473909 KCNF1Q9H3M0 494 aa8.54□□□□□ -1.04
NMD3-207ENST00000473909 VCPKMTQ9H867 229 aa8.54□□□□□ -1.04
NMD3-207ENST00000473909 TTC12Q9H892 705 aaPredicted RBP8.54□□□□□ -1.04
NMD3-207ENST00000473909 PSTPIP2Q9H939 334 aa8.54□□□□□ -1.04
NMD3-207ENST00000473909 RYDENQ9NUL5 291 aaKnown RBP8.54□□□□□ -1.04
NMD3-207ENST00000473909 DICER1Q9UPY3 1922 aaKnown RBP8.54□□□□□ -1.04
NMD3-207ENST00000473909 MYO1BO43795 1136 aa8.53□□□□□ -1.04
NMD3-207ENST00000473909 NEMFO60524 1076 aa8.53□□□□□ -1.04
NMD3-207ENST00000473909 ATP1A3P13637 1013 aa8.53□□□□□ -1.04
NMD3-207ENST00000473909 YBX3P16989 372 aaKnown RBP eCLIP8.53□□□□□ -1.044e-6■■□□□ 11.4
NMD3-207ENST00000473909 PTGS1P23219 599 aa8.53□□□□□ -1.04
NMD3-207ENST00000473909 HOXA13P31271 388 aaPredicted RBP8.53□□□□□ -1.04
NMD3-207ENST00000473909 TXKP42681 527 aa8.53□□□□□ -1.04
NMD3-207ENST00000473909 MMP14P50281 582 aa8.53□□□□□ -1.04
NMD3-207ENST00000473909 IKQ13123 557 aaPredicted RBP8.53□□□□□ -1.04
NMD3-207ENST00000473909 GRB10Q13322 594 aa8.53□□□□□ -1.04
NMD3-207ENST00000473909 ARID5BQ14865 1188 aa8.53□□□□□ -1.04
NMD3-207ENST00000473909 ECM1Q16610 540 aa8.53□□□□□ -1.04
NMD3-207ENST00000473909 ANGEL2Q5VTE6 544 aaKnown RBP8.53□□□□□ -1.04
NMD3-207ENST00000473909 SARM1Q6SZW1 724 aa8.53□□□□□ -1.04
NMD3-207ENST00000473909 TRMT44Q8IYL2 757 aaKnown RBP8.53□□□□□ -1.04
NMD3-207ENST00000473909 CUL5Q93034 780 aa8.53□□□□□ -1.04
NMD3-207ENST00000473909 SMARCE1Q969G3 411 aa8.53□□□□□ -1.04
NMD3-207ENST00000473909 KIFC2Q96AC6 838 aa8.53□□□□□ -1.04
NMD3-207ENST00000473909 TRIM44Q96DX7 344 aaPredicted RBP8.53□□□□□ -1.04
NMD3-207ENST00000473909 ANO3Q9BYT9 981 aa8.53□□□□□ -1.04
NMD3-207ENST00000473909 DEFB129Q9H1M3 183 aa8.53□□□□□ -1.04
NMD3-207ENST00000473909 SPON1Q9HCB6 807 aa8.53□□□□□ -1.04
NMD3-207ENST00000473909 ARHGEF10LQ9HCE6 1279 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms