RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 PLEKHA8P1O95397 391 aa11.31□□□□□ -0.6
RTFDC1-205ENST00000466260 AKR1A1P14550 325 aa11.31□□□□□ -0.6
RTFDC1-205ENST00000466260 HSPA4P34932 840 aa11.31□□□□□ -0.6
RTFDC1-205ENST00000466260 RPS6P62753 249 aaKnown RBP11.31□□□□□ -0.6
RTFDC1-205ENST00000466260 TROAPQ12815 778 aa11.31□□□□□ -0.6
RTFDC1-205ENST00000466260 SLC35G1Q2M3R5 365 aa11.31□□□□□ -0.6
RTFDC1-205ENST00000466260 FBXO16Q8IX29 292 aaPredicted RBP11.31□□□□□ -0.6
RTFDC1-205ENST00000466260 CCDC82Q8N4S0 544 aa11.31□□□□□ -0.6
RTFDC1-205ENST00000466260 CLEC4DQ8WXI8 215 aa11.31□□□□□ -0.6
RTFDC1-205ENST00000466260 TBC1D5Q92609 795 aa11.31□□□□□ -0.6
RTFDC1-205ENST00000466260 HTATIP2Q9BUP3 242 aa11.31□□□□□ -0.6
RTFDC1-205ENST00000466260 SLC12A7Q9Y666 1083 aa11.31□□□□□ -0.6
RTFDC1-205ENST00000466260 MKI67P46013 3256 aaKnown RBP11.31□□□□□ -0.6
RTFDC1-205ENST00000466260 ASTN1O14525 1302 aa11.31□□□□□ -0.6
RTFDC1-205ENST00000466260 ABCB11O95342 1321 aa11.31□□□□□ -0.6
RTFDC1-205ENST00000466260 SYNGAP1Q96PV0 1343 aa11.31□□□□□ -0.6
RTFDC1-205ENST00000466260 MYH7BA7E2Y1 1941 aa11.31□□□□□ -0.6
RTFDC1-205ENST00000466260 CYTH3O43739 400 aa11.3□□□□□ -0.6
RTFDC1-205ENST00000466260 PGK1P00558 417 aa11.3□□□□□ -0.6
RTFDC1-205ENST00000466260 CFBP00751 764 aa11.3□□□□□ -0.6
RTFDC1-205ENST00000466260 IGHA2P01877 340 aa11.3□□□□□ -0.6
RTFDC1-205ENST00000466260 ZNF865P0CJ78 1059 aaPredicted RBP11.3□□□□□ -0.6
RTFDC1-205ENST00000466260 RARBP10826 455 aa11.3□□□□□ -0.6
RTFDC1-205ENST00000466260 ALDH5A1P51649 535 aaPredicted RBP11.3□□□□□ -0.6
RTFDC1-205ENST00000466260 ATN1P54259 1190 aaPredicted RBP11.3□□□□□ -0.6
RTFDC1-205ENST00000466260 ACVR2BQ13705 512 aa11.3□□□□□ -0.6
RTFDC1-205ENST00000466260 KRT32Q14532 448 aa11.3□□□□□ -0.6
RTFDC1-205ENST00000466260 BLOC1S2Q6QNY1 142 aa11.3□□□□□ -0.6
RTFDC1-205ENST00000466260 SYNE3Q6ZMZ3 975 aa11.3□□□□□ -0.6
RTFDC1-205ENST00000466260 NOL8Q76FK4 1167 aaKnown RBP11.3□□□□□ -0.6
RTFDC1-205ENST00000466260 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.3□□□□□ -0.6
RTFDC1-205ENST00000466260 DHX32Q7L7V1 743 aaKnown RBP11.3□□□□□ -0.6
RTFDC1-205ENST00000466260 ANKLE1Q8NAG6 615 aa11.3□□□□□ -0.6
RTFDC1-205ENST00000466260 AMNQ9BXJ7 453 aa11.3□□□□□ -0.6
RTFDC1-205ENST00000466260 SENP6Q9GZR1 1112 aaPredicted RBP11.3□□□□□ -0.6
RTFDC1-205ENST00000466260 XPNPEP3Q9NQH7 507 aa11.3□□□□□ -0.6
RTFDC1-205ENST00000466260 PCDH10Q9P2E7 1040 aa11.3□□□□□ -0.6
RTFDC1-205ENST00000466260 DOCK5Q9H7D0 1870 aa11.29□□□□□ -0.6
RTFDC1-205ENST00000466260 KLF18A0A0U1RQI7 1052 aa11.29□□□□□ -0.6
RTFDC1-205ENST00000466260 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.29□□□□□ -0.6
RTFDC1-205ENST00000466260 hCG_1642624A0A1W2PR95 340 aa11.29□□□□□ -0.6
RTFDC1-205ENST00000466260 ASB14A6NK59 587 aa11.29□□□□□ -0.6
RTFDC1-205ENST00000466260 KBTBD13C9JR72 458 aa11.29□□□□□ -0.6
RTFDC1-205ENST00000466260 ZBTB5O15062 677 aa11.29□□□□□ -0.6
RTFDC1-205ENST00000466260 PPP1R11O60927 126 aaPredicted RBP11.29□□□□□ -0.6
RTFDC1-205ENST00000466260 CASTP20810 708 aaKnown RBP11.29□□□□□ -0.6
RTFDC1-205ENST00000466260 PTGS1P23219 599 aa11.29□□□□□ -0.6
RTFDC1-205ENST00000466260 KIF5BP33176 963 aa11.29□□□□□ -0.6
RTFDC1-205ENST00000466260 ADCYAP1R1P41586 468 aa11.29□□□□□ -0.6
RTFDC1-205ENST00000466260 LIFRP42702 1097 aa11.29□□□□□ -0.6
RTFDC1-205ENST00000466260 IRX5P78411 483 aaPredicted RBP11.29□□□□□ -0.6
RTFDC1-205ENST00000466260 CCDC144BQ3MJ40 725 aa11.29□□□□□ -0.6
RTFDC1-205ENST00000466260 MAMDC4Q6UXC1 1216 aa11.29□□□□□ -0.6
RTFDC1-205ENST00000466260 Q6ZUG5 572 aa11.29□□□□□ -0.6
RTFDC1-205ENST00000466260 UBE2Q1Q7Z7E8 422 aa11.29□□□□□ -0.6
RTFDC1-205ENST00000466260 C7orf61Q8IZ16 206 aa11.29□□□□□ -0.6
RTFDC1-205ENST00000466260 TMTC2Q8N394 836 aa11.29□□□□□ -0.6
RTFDC1-205ENST00000466260 MSL3Q8N5Y2 521 aaKnown RBP11.29□□□□□ -0.6
RTFDC1-205ENST00000466260 FERMT2Q96AC1 680 aa11.29□□□□□ -0.6
RTFDC1-205ENST00000466260 ADD3Q9UEY8 706 aaKnown RBP11.29□□□□□ -0.6
RTFDC1-205ENST00000466260 PNMA2Q9UL42 364 aa11.29□□□□□ -0.6
RTFDC1-205ENST00000466260 FAM184BQ9ULE4 1060 aa11.29□□□□□ -0.6
RTFDC1-205ENST00000466260 MRPL11Q9Y3B7 192 aaKnown RBP11.29□□□□□ -0.6
RTFDC1-205ENST00000466260 GOLGA8AA7E2F4 631 aa11.28□□□□□ -0.6
RTFDC1-205ENST00000466260 GOLGA8BA8MQT2 603 aa11.28□□□□□ -0.6
RTFDC1-205ENST00000466260 ADCY6O43306 1168 aa11.28□□□□□ -0.6
RTFDC1-205ENST00000466260 EVI5O60447 810 aa11.28□□□□□ -0.6
RTFDC1-205ENST00000466260 C6orf222P0C671 652 aaPredicted RBP11.28□□□□□ -0.6
RTFDC1-205ENST00000466260 PDE4DQ08499 809 aa11.28□□□□□ -0.6
RTFDC1-205ENST00000466260 APOBRQ0VD83 1088 aa11.28□□□□□ -0.6
RTFDC1-205ENST00000466260 PDAP1Q13442 181 aaKnown RBP11.28□□□□□ -0.6
RTFDC1-205ENST00000466260 LRRC41Q15345 812 aa11.28□□□□□ -0.6
RTFDC1-205ENST00000466260 APOA5Q6Q788 366 aa11.28□□□□□ -0.6
RTFDC1-205ENST00000466260 TAAR1Q96RJ0 339 aa11.28□□□□□ -0.6
RTFDC1-205ENST00000466260 MTA3Q9BTC8 594 aa11.28□□□□□ -0.6
RTFDC1-205ENST00000466260 ABHD16BQ9H3Z7 469 aa11.28□□□□□ -0.6
RTFDC1-205ENST00000466260 RIOX1Q9H6W3 641 aa11.28□□□□□ -0.6
RTFDC1-205ENST00000466260 PDGFCQ9NRA1 345 aa11.28□□□□□ -0.6
RTFDC1-205ENST00000466260 COL20A1Q9P218 1284 aa11.28□□□□□ -0.6
RTFDC1-205ENST00000466260 SEC63Q9UGP8 760 aaKnown RBP11.28□□□□□ -0.6
RTFDC1-205ENST00000466260 BRPF3Q9ULD4 1205 aa11.28□□□□□ -0.6
RTFDC1-205ENST00000466260 PCDHA1Q9Y5I3 950 aa11.28□□□□□ -0.6
RTFDC1-205ENST00000466260 STK24Q9Y6E0 443 aa11.28□□□□□ -0.6
RTFDC1-205ENST00000466260 SYNRGQ9UMZ2 1314 aa11.28□□□□□ -0.6
RTFDC1-205ENST00000466260 MYADML2A6NDP7 307 aa11.27□□□□□ -0.61
RTFDC1-205ENST00000466260 DNM1LO00429 736 aa11.27□□□□□ -0.61
RTFDC1-205ENST00000466260 ZBTB43O43298 467 aa11.27□□□□□ -0.61
RTFDC1-205ENST00000466260 CALM1P0DP23 149 aa11.27□□□□□ -0.61
RTFDC1-205ENST00000466260 CALM2P0DP24 149 aa11.27□□□□□ -0.61
RTFDC1-205ENST00000466260 CALM3P0DP25 149 aa11.27□□□□□ -0.61
RTFDC1-205ENST00000466260 SYN1P17600 705 aa11.27□□□□□ -0.61
RTFDC1-205ENST00000466260 EIF2AK2P19525 551 aaKnown RBP11.27□□□□□ -0.61
RTFDC1-205ENST00000466260 RPS6KB1P23443 525 aa11.27□□□□□ -0.61
RTFDC1-205ENST00000466260 HOXA13P31271 388 aaPredicted RBP11.27□□□□□ -0.61
RTFDC1-205ENST00000466260 EXOSC10Q01780 885 aaKnown RBP11.27□□□□□ -0.61
RTFDC1-205ENST00000466260 RTN1Q16799 776 aa11.27□□□□□ -0.61
RTFDC1-205ENST00000466260 TSGA10IPQ3SY00 556 aa11.27□□□□□ -0.61
RTFDC1-205ENST00000466260 TMEM63BQ5T3F8 832 aa11.27□□□□□ -0.61
RTFDC1-205ENST00000466260 PRPF38BQ5VTL8 546 aaKnown RBP11.27□□□□□ -0.61
RTFDC1-205ENST00000466260 RNF180Q86T96 592 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms