RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 DNAJC25-GNG10A0A024R161 153 aa13.69□□□□□ -0.22
LINC00339-205ENST00000452322 ESYT2A0FGR8 921 aa13.69□□□□□ -0.22
LINC00339-205ENST00000452322 DTNBO60941 627 aa13.69□□□□□ -0.22
LINC00339-205ENST00000452322 HOXC6P09630 235 aa13.69□□□□□ -0.22
LINC00339-205ENST00000452322 RGS2P41220 211 aa13.69□□□□□ -0.22
LINC00339-205ENST00000452322 HSD17B4P51659 736 aa13.69□□□□□ -0.22
LINC00339-205ENST00000452322 RPS6P62753 249 aaKnown RBP13.69□□□□□ -0.22
LINC00339-205ENST00000452322 PRKCZQ05513 592 aa13.69□□□□□ -0.22
LINC00339-205ENST00000452322 INTS4Q96HW7 963 aaKnown RBP13.69□□□□□ -0.22
LINC00339-205ENST00000452322 GLT8D2Q9H1C3 349 aa13.69□□□□□ -0.22
LINC00339-205ENST00000452322 SLC5A4Q9NY91 659 aa13.69□□□□□ -0.22
LINC00339-205ENST00000452322 HTTP42858 3142 aa13.68□□□□□ -0.22
LINC00339-205ENST00000452322 ZNFX1Q9P2E3 1918 aaKnown RBP13.68□□□□□ -0.22
LINC00339-205ENST00000452322 PIK3CDO00329 1044 aa13.68□□□□□ -0.22
LINC00339-205ENST00000452322 CFBP00751 764 aa13.68□□□□□ -0.22
LINC00339-205ENST00000452322 XBP1P17861 261 aa13.68□□□□□ -0.22
LINC00339-205ENST00000452322 FLT3LGP49771 235 aa13.68□□□□□ -0.22
LINC00339-205ENST00000452322 IRF5Q13568 498 aa13.68□□□□□ -0.22
LINC00339-205ENST00000452322 BAATQ14032 418 aaPredicted RBP13.68□□□□□ -0.22
LINC00339-205ENST00000452322 SLC30A10Q6XR72 485 aa13.68□□□□□ -0.22
LINC00339-205ENST00000452322 CTU1Q7Z7A3 348 aaKnown RBP13.68□□□□□ -0.22
LINC00339-205ENST00000452322 DPP9Q86TI2 863 aa13.68□□□□□ -0.22
LINC00339-205ENST00000452322 TBC1D5Q92609 795 aa13.68□□□□□ -0.22
LINC00339-205ENST00000452322 CUL5Q93034 780 aa13.68□□□□□ -0.22
LINC00339-205ENST00000452322 AIFM3Q96NN9 605 aa13.68□□□□□ -0.22
LINC00339-205ENST00000452322 APBA2Q99767 749 aa13.68□□□□□ -0.22
LINC00339-205ENST00000452322 ALG1Q9BT22 464 aa13.68□□□□□ -0.22
LINC00339-205ENST00000452322 ZMYND12Q9H0C1 365 aa13.68□□□□□ -0.22
LINC00339-205ENST00000452322 PSTPIP2Q9H939 334 aa13.68□□□□□ -0.22
LINC00339-205ENST00000452322 VPS54Q9P1Q0 977 aa13.68□□□□□ -0.22
LINC00339-205ENST00000452322 GABRQQ9UN88 632 aa13.68□□□□□ -0.22
LINC00339-205ENST00000452322 DIS3Q9Y2L1 958 aaKnown RBP13.68□□□□□ -0.22
LINC00339-205ENST00000452322 SMCO2A6NFE2 343 aa13.67□□□□□ -0.22
LINC00339-205ENST00000452322 POTEB2H3BUK9 544 aa13.67□□□□□ -0.22
LINC00339-205ENST00000452322 GCOM1H8Y6P7 765 aaPredicted RBP13.67□□□□□ -0.22
LINC00339-205ENST00000452322 COBLO75128 1261 aa13.67□□□□□ -0.22
LINC00339-205ENST00000452322 PGK2P07205 417 aa13.67□□□□□ -0.22
LINC00339-205ENST00000452322 POLR2MP0CAP2 368 aa13.67□□□□□ -0.22
LINC00339-205ENST00000452322 XRCC5P13010 732 aaKnown RBP13.67□□□□□ -0.22
LINC00339-205ENST00000452322 CALML3P27482 149 aa13.67□□□□□ -0.22
LINC00339-205ENST00000452322 GNA11P29992 359 aa13.67□□□□□ -0.22
LINC00339-205ENST00000452322 ADCY7P51828 1080 aa13.67□□□□□ -0.22
LINC00339-205ENST00000452322 MRPL12P52815 198 aaKnown RBP13.67□□□□□ -0.22
LINC00339-205ENST00000452322 ZNF792Q3KQV3 632 aa13.67□□□□□ -0.22
LINC00339-205ENST00000452322 FAM133AQ8N9E0 248 aa13.67□□□□□ -0.22
LINC00339-205ENST00000452322 FAM184AQ8NB25 1140 aa13.67□□□□□ -0.22
LINC00339-205ENST00000452322 SYTL5Q8TDW5 730 aaPredicted RBP13.67□□□□□ -0.22
LINC00339-205ENST00000452322 SHISA4Q96DD7 197 aa13.67□□□□□ -0.22
LINC00339-205ENST00000452322 C6orf50Q9HD87 102 aa13.67□□□□□ -0.22
LINC00339-205ENST00000452322 RIC8AQ9NPQ8 531 aa13.67□□□□□ -0.22
LINC00339-205ENST00000452322 SMC3Q9UQE7 1217 aa13.67□□□□□ -0.22
LINC00339-205ENST00000452322 KIF3AQ9Y496 699 aa13.67□□□□□ -0.22
LINC00339-205ENST00000452322 LCTP09848 1927 aa13.67□□□□□ -0.22
LINC00339-205ENST00000452322 PLXNA1Q9UIW2 1896 aa13.66□□□□□ -0.22
LINC00339-205ENST00000452322 MEIS2O14770 477 aa13.66□□□□□ -0.22
LINC00339-205ENST00000452322 CYP2B6P20813 491 aa13.66□□□□□ -0.22
LINC00339-205ENST00000452322 GJB2P29033 226 aa13.66□□□□□ -0.22
LINC00339-205ENST00000452322 NLRP5P59047 1200 aa13.66□□□□□ -0.22
LINC00339-205ENST00000452322 BECN1Q14457 450 aa13.66□□□□□ -0.22
LINC00339-205ENST00000452322 GALNT17Q6IS24 598 aa13.66□□□□□ -0.22
LINC00339-205ENST00000452322 ZNF467Q7Z7K2 595 aaPredicted RBP13.66□□□□□ -0.22
LINC00339-205ENST00000452322 PTPN22Q9Y2R2 807 aa13.66□□□□□ -0.22
LINC00339-205ENST00000452322 LOC102724159A0A0B4J2E5 919 aa13.65□□□□□ -0.22
LINC00339-205ENST00000452322 HOXA13P31271 388 aaPredicted RBP13.65□□□□□ -0.22
LINC00339-205ENST00000452322 CNTN2Q02246 1040 aa13.65□□□□□ -0.22
LINC00339-205ENST00000452322 TRIM29Q14134 588 aa13.65□□□□□ -0.22
LINC00339-205ENST00000452322 PWP2Q15269 919 aaKnown RBP13.65□□□□□ -0.22
LINC00339-205ENST00000452322 PKN2Q16513 984 aaKnown RBP13.65□□□□□ -0.22
LINC00339-205ENST00000452322 USP17L6PQ6QN14 398 aa13.65□□□□□ -0.22
LINC00339-205ENST00000452322 TRMT44Q8IYL2 757 aaKnown RBP13.65□□□□□ -0.22
LINC00339-205ENST00000452322 DAGLBQ8NCG7 672 aa13.65□□□□□ -0.22
LINC00339-205ENST00000452322 DNERQ8NFT8 737 aa13.65□□□□□ -0.22
LINC00339-205ENST00000452322 NPLOC4Q8TAT6 608 aa13.65□□□□□ -0.22
LINC00339-205ENST00000452322 RAET1EQ8TD07 263 aa13.65□□□□□ -0.22
LINC00339-205ENST00000452322 BICD2Q8TD16 824 aa13.65□□□□□ -0.22
LINC00339-205ENST00000452322 MAML3Q96JK9 1138 aa13.65□□□□□ -0.22
LINC00339-205ENST00000452322 FGD4Q96M96 766 aa13.65□□□□□ -0.22
LINC00339-205ENST00000452322 PHF20Q9BVI0 1012 aa13.65□□□□□ -0.22
LINC00339-205ENST00000452322 COL20A1Q9P218 1284 aa13.65□□□□□ -0.22
LINC00339-205ENST00000452322 ADD3Q9UEY8 706 aaKnown RBP13.65□□□□□ -0.22
LINC00339-205ENST00000452322 SOWAHBA6NEL2 793 aa13.64□□□□□ -0.23
LINC00339-205ENST00000452322 CLK2P49760 499 aaKnown RBP13.64□□□□□ -0.23
LINC00339-205ENST00000452322 ALDH5A1P51649 535 aaPredicted RBP13.64□□□□□ -0.23
LINC00339-205ENST00000452322 AP3B2Q13367 1082 aa13.64□□□□□ -0.23
LINC00339-205ENST00000452322 UBE2SQ16763 222 aa13.64□□□□□ -0.23
LINC00339-205ENST00000452322 OLFML2BQ68BL8 750 aa13.64□□□□□ -0.23
LINC00339-205ENST00000452322 MCTP2Q6DN12 878 aa13.64□□□□□ -0.23
LINC00339-205ENST00000452322 REXO1Q8N1G1 1221 aaKnown RBP13.64□□□□□ -0.23
LINC00339-205ENST00000452322 MSL3Q8N5Y2 521 aaKnown RBP13.64□□□□□ -0.23
LINC00339-205ENST00000452322 PXYLP1Q8TE99 480 aa13.64□□□□□ -0.23
LINC00339-205ENST00000452322 C8orf76Q96K31 380 aa13.64□□□□□ -0.23
LINC00339-205ENST00000452322 PURBQ96QR8 312 aaKnown RBP13.64□□□□□ -0.23
LINC00339-205ENST00000452322 GJB4Q9NTQ9 266 aa13.64□□□□□ -0.23
LINC00339-205ENST00000452322 PCDHA4Q9UN74 947 aa13.64□□□□□ -0.23
LINC00339-205ENST00000452322 KCNJ14Q9UNX9 436 aa13.64□□□□□ -0.23
LINC00339-205ENST00000452322 PTCH2Q9Y6C5 1203 aa13.64□□□□□ -0.23
LINC00339-205ENST00000452322 ASTN1O14525 1302 aa13.63□□□□□ -0.23
LINC00339-205ENST00000452322 FRMPD4Q14CM0 1322 aa13.63□□□□□ -0.23
LINC00339-205ENST00000452322 CENPFP49454 3210 aa13.63□□□□□ -0.23
LINC00339-205ENST00000452322 SPDYE3A6NKU9 549 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms