RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 MRFAP1L1Q96HT8 127 aa7.68□□□□□ -1.18
NIFKP3-201ENST00000417799 ZNF214Q9UL59 606 aaPredicted RBP7.68□□□□□ -1.18
NIFKP3-201ENST00000417799 PCDHB10Q9UN67 800 aa7.68□□□□□ -1.18
NIFKP3-201ENST00000417799 NUDCQ9Y266 331 aa7.68□□□□□ -1.18
NIFKP3-201ENST00000417799 RAXQ9Y2V3 346 aa7.68□□□□□ -1.18
NIFKP3-201ENST00000417799 MSRB2Q9Y3D2 182 aa7.68□□□□□ -1.18
NIFKP3-201ENST00000417799 MAP2P11137 1827 aaKnown RBP7.68□□□□□ -1.18
NIFKP3-201ENST00000417799 RTL1A6NKG5 1358 aa7.68□□□□□ -1.18
NIFKP3-201ENST00000417799 CPDO75976 1380 aa7.68□□□□□ -1.18
NIFKP3-201ENST00000417799 JCADQ9P266 1359 aa7.68□□□□□ -1.18
NIFKP3-201ENST00000417799 B2RBV5 119 aa7.67□□□□□ -1.18
NIFKP3-201ENST00000417799 CLEC3AO75596 197 aa7.67□□□□□ -1.18
NIFKP3-201ENST00000417799 PMS1P54277 932 aaKnown RBP7.67□□□□□ -1.18
NIFKP3-201ENST00000417799 EIF4A2Q14240 407 aaKnown RBP7.67□□□□□ -1.18
NIFKP3-201ENST00000417799 GNPTABQ3T906 1256 aa7.67□□□□□ -1.18
NIFKP3-201ENST00000417799 LRP10Q7Z4F1 713 aa7.67□□□□□ -1.18
NIFKP3-201ENST00000417799 CDH24Q86UP0 819 aa7.67□□□□□ -1.18
NIFKP3-201ENST00000417799 TOP6BLQ8N6T0 577 aa7.67□□□□□ -1.18
NIFKP3-201ENST00000417799 DNAJB8Q8NHS0 232 aa7.67□□□□□ -1.18
NIFKP3-201ENST00000417799 DEPDC7Q96QD5 511 aa7.67□□□□□ -1.18
NIFKP3-201ENST00000417799 CCDC113Q9H0I3 377 aa7.67□□□□□ -1.18
NIFKP3-201ENST00000417799 PRDM11Q9NQV5 511 aa7.67□□□□□ -1.18
NIFKP3-201ENST00000417799 SNTG2Q9NY99 539 aa7.67□□□□□ -1.18
NIFKP3-201ENST00000417799 STOML1Q9UBI4 398 aa7.67□□□□□ -1.18
NIFKP3-201ENST00000417799 SUCOQ9UBS9 1254 aaKnown RBP7.67□□□□□ -1.18
NIFKP3-201ENST00000417799 KIAA0232Q92628 1395 aa7.67□□□□□ -1.18
NIFKP3-201ENST00000417799 COL3A1P02461 1466 aaPredicted RBP7.67□□□□□ -1.18
NIFKP3-201ENST00000417799 HMX2A2RU54 273 aa7.66□□□□□ -1.18
NIFKP3-201ENST00000417799 FAM83GA6ND36 823 aa7.66□□□□□ -1.18
NIFKP3-201ENST00000417799 SLC7A5Q01650 507 aa7.66□□□□□ -1.18
NIFKP3-201ENST00000417799 RASA3Q14644 834 aa7.66□□□□□ -1.18
NIFKP3-201ENST00000417799 NCAPHQ15003 741 aa7.66□□□□□ -1.18
NIFKP3-201ENST00000417799 CHRNA2Q15822 529 aa7.66□□□□□ -1.18
NIFKP3-201ENST00000417799 BBS9Q3SYG4 887 aa7.66□□□□□ -1.18
NIFKP3-201ENST00000417799 KIAA1211LQ6NV74 962 aa7.66□□□□□ -1.18
NIFKP3-201ENST00000417799 GIMAP6Q6P9H5 292 aa7.66□□□□□ -1.18
NIFKP3-201ENST00000417799 DUSP23Q9BVJ7 150 aa7.66□□□□□ -1.18
NIFKP3-201ENST00000417799 C7orf69Q9H7B7 122 aa7.66□□□□□ -1.18
NIFKP3-201ENST00000417799 COL22A1Q8NFW1 1626 aaPredicted RBP7.66□□□□□ -1.18
NIFKP3-201ENST00000417799 PHRF1Q9P1Y6 1649 aaKnown RBP7.66□□□□□ -1.18
NIFKP3-201ENST00000417799 PEAK1Q9H792 1746 aa7.66□□□□□ -1.18
NIFKP3-201ENST00000417799 CRYBG1Q9Y4K1 1723 aa7.66□□□□□ -1.18
NIFKP3-201ENST00000417799 FAM221BA6H8Z2 402 aa7.65□□□□□ -1.18
NIFKP3-201ENST00000417799 PDPK1O15530 556 aa7.65□□□□□ -1.18
NIFKP3-201ENST00000417799 U2AF1L5P0DN76 240 aaPredicted RBP7.65□□□□□ -1.18
NIFKP3-201ENST00000417799 ETV3P41162 512 aa7.65□□□□□ -1.18
NIFKP3-201ENST00000417799 BLMP54132 1417 aaPredicted RBP7.65□□□□□ -1.18
NIFKP3-201ENST00000417799 U2AF1Q01081 240 aaKnown RBP eCLIP7.65□□□□□ -1.18
NIFKP3-201ENST00000417799 PLA2G4EQ3MJ16 856 aa7.65□□□□□ -1.18
NIFKP3-201ENST00000417799 SPATA31A6Q5VVP1 1343 aa7.65□□□□□ -1.18
NIFKP3-201ENST00000417799 PRR23CQ6ZRP0 262 aa7.65□□□□□ -1.18
NIFKP3-201ENST00000417799 FBXO41Q8TF61 875 aa7.65□□□□□ -1.18
NIFKP3-201ENST00000417799 KLHL6Q8WZ60 621 aa7.65□□□□□ -1.18
NIFKP3-201ENST00000417799 LTV1Q96GA3 475 aaPredicted RBP7.65□□□□□ -1.18
NIFKP3-201ENST00000417799 TBC1D32Q96NH3 1257 aa7.65□□□□□ -1.18
NIFKP3-201ENST00000417799 ABCC6O95255 1503 aa7.64□□□□□ -1.19
NIFKP3-201ENST00000417799 LEFTY1O75610 366 aa7.64□□□□□ -1.19
NIFKP3-201ENST00000417799 EOMESO95936 686 aa7.64□□□□□ -1.19
NIFKP3-201ENST00000417799 TP53P04637 393 aaPredicted RBP7.64□□□□□ -1.19
NIFKP3-201ENST00000417799 FAM87AP0C7U9 286 aa7.64□□□□□ -1.19
NIFKP3-201ENST00000417799 TDRD10Q5VZ19 366 aaKnown RBP7.64□□□□□ -1.19
NIFKP3-201ENST00000417799 ZNF746Q6NUN9 644 aaPredicted RBP7.64□□□□□ -1.19
NIFKP3-201ENST00000417799 PPFIBP1Q86W92 1011 aa7.64□□□□□ -1.19
NIFKP3-201ENST00000417799 SMARCC1Q92922 1105 aaPredicted RBP7.64□□□□□ -1.19
NIFKP3-201ENST00000417799 ZNF512BQ96KM6 892 aaPredicted RBP7.64□□□□□ -1.19
NIFKP3-201ENST00000417799 KREMEN1Q96MU8 473 aa7.64□□□□□ -1.19
NIFKP3-201ENST00000417799 KRTAP4-8Q9BYQ9 185 aa7.64□□□□□ -1.19
NIFKP3-201ENST00000417799 TPSG1Q9NRR2 321 aa7.64□□□□□ -1.19
NIFKP3-201ENST00000417799 FAM86C1Q9NVL1 165 aa7.64□□□□□ -1.19
NIFKP3-201ENST00000417799 TPX2Q9ULW0 747 aaKnown RBP7.64□□□□□ -1.19
NIFKP3-201ENST00000417799 LTN1O94822 1766 aa7.64□□□□□ -1.19
NIFKP3-201ENST00000417799 SHPRHQ149N8 1683 aa7.63□□□□□ -1.19
NIFKP3-201ENST00000417799 C9IYK1 514 aa7.63□□□□□ -1.19
NIFKP3-201ENST00000417799 ITGB2P05107 769 aa7.63□□□□□ -1.19
NIFKP3-201ENST00000417799 CYP7A1P22680 504 aa7.63□□□□□ -1.19
NIFKP3-201ENST00000417799 ADMP35318 185 aa7.63□□□□□ -1.19
NIFKP3-201ENST00000417799 RNF4P78317 190 aa7.63□□□□□ -1.19
NIFKP3-201ENST00000417799 RASGRF1Q13972 1273 aa7.63□□□□□ -1.19
NIFKP3-201ENST00000417799 NBPF12Q5TAG4 269 aaPredicted RBP7.63□□□□□ -1.19
NIFKP3-201ENST00000417799 MRM1Q6IN84 353 aaKnown RBP7.63□□□□□ -1.19
NIFKP3-201ENST00000417799 OGFOD3Q6PK18 319 aa7.63□□□□□ -1.19
NIFKP3-201ENST00000417799 ZAR1Q86SH2 424 aa7.63□□□□□ -1.19
NIFKP3-201ENST00000417799 GATA6Q92908 595 aa7.63□□□□□ -1.19
NIFKP3-201ENST00000417799 MKRN2Q9H000 416 aaKnown RBP7.63□□□□□ -1.19
NIFKP3-201ENST00000417799 PNNQ9H307 717 aaKnown RBP7.63□□□□□ -1.19
NIFKP3-201ENST00000417799 ABCA3Q99758 1704 aa7.63□□□□□ -1.19
NIFKP3-201ENST00000417799 COL18A1P39060 1754 aa7.62□□□□□ -1.19
NIFKP3-201ENST00000417799 IGSF1Q8N6C5 1336 aa7.62□□□□□ -1.19
NIFKP3-201ENST00000417799 SMARCA5O60264 1052 aaPredicted RBP7.62□□□□□ -1.19
NIFKP3-201ENST00000417799 HMOX1P09601 288 aa7.62□□□□□ -1.19
NIFKP3-201ENST00000417799 EVA1CP58658 441 aa7.62□□□□□ -1.19
NIFKP3-201ENST00000417799 IFRD2Q12894 506 aaPredicted RBP7.62□□□□□ -1.19
NIFKP3-201ENST00000417799 SULT6B1Q6IMI4 303 aa7.62□□□□□ -1.19
NIFKP3-201ENST00000417799 EEPD1Q7L9B9 569 aa7.62□□□□□ -1.19
NIFKP3-201ENST00000417799 CCDC144CPQ8IYA2 1237 aa7.62□□□□□ -1.19
NIFKP3-201ENST00000417799 CCDC146Q8IYE0 955 aa7.62□□□□□ -1.19
NIFKP3-201ENST00000417799 RNF141Q8WVD5 230 aa7.62□□□□□ -1.19
NIFKP3-201ENST00000417799 RUNDC1Q96C34 613 aa7.62□□□□□ -1.19
NIFKP3-201ENST00000417799 VWCEQ96DN2 955 aa7.62□□□□□ -1.19
NIFKP3-201ENST00000417799 BTG4Q9NY30 223 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms